RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 TMEM18Q96B42 140 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 STAMBPL1Q96FJ0 436 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 MYADMQ96S97 322 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 ASCL2Q99929 193 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 FNDC11Q9BVV2 318 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 NPFFR1Q9GZQ6 430 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 NAPBQ9H115 298 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 KCNN2Q9H2S1 579 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 WDR26Q9H7D7 661 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 SEBOXQ9HB31 216 aaPredicted RBP4.74□□□□□ -1.65
LSM5-205ENST00000409952 CDH20Q9HBT6 801 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 TM9SF3Q9HD45 589 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 KCNMB3Q9NPA1 279 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 NMRK1Q9NWW6 199 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 GAGE2DQ9UEU5 116 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 PACSIN3Q9UKS6 424 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 ST3GAL5Q9UNP4 418 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 LAMP3Q9UQV4 416 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 B3GALT5Q9Y2C3 310 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 HBS1LQ9Y450 684 aaKnown RBP4.74□□□□□ -1.65
LSM5-205ENST00000409952 POC1B-GALNT4F8VUJ3 575 aa4.73□□□□□ -1.65
LSM5-205ENST00000409952 F8W810 466 aa4.73□□□□□ -1.65
LSM5-205ENST00000409952 MAGEB2O15479 319 aa4.73□□□□□ -1.65
LSM5-205ENST00000409952 OR10H2O60403 315 aa4.73□□□□□ -1.65
LSM5-205ENST00000409952 RAMP2O60895 175 aa4.73□□□□□ -1.65
LSM5-205ENST00000409952 ANKRD34CP0C6C1 535 aa4.73□□□□□ -1.65
LSM5-205ENST00000409952 THRBP10828 461 aa4.73□□□□□ -1.65
LSM5-205ENST00000409952 FUT1P19526 365 aa4.73□□□□□ -1.65
LSM5-205ENST00000409952 GLRA2P23416 452 aa4.73□□□□□ -1.65
LSM5-205ENST00000409952 PSMA5P28066 241 aa4.73□□□□□ -1.65
LSM5-205ENST00000409952 TRPC1P48995 793 aa4.73□□□□□ -1.65
LSM5-205ENST00000409952 MAPK12P53778 367 aa4.73□□□□□ -1.65
LSM5-205ENST00000409952 CCNA1P78396 465 aa4.73□□□□□ -1.65
LSM5-205ENST00000409952 COX10Q12887 443 aa4.73□□□□□ -1.65
LSM5-205ENST00000409952 CUL3Q13618 768 aa4.73□□□□□ -1.65
LSM5-205ENST00000409952 CCDC142Q17RM4 750 aa4.73□□□□□ -1.65
LSM5-205ENST00000409952 EIF2S3LQ2VIR3 472 aaKnown RBP4.73□□□□□ -1.65
LSM5-205ENST00000409952 DCAF6Q58WW2 860 aa4.73□□□□□ -1.65
LSM5-205ENST00000409952 ATAD3BQ5T9A4 648 aa4.73□□□□□ -1.65
LSM5-205ENST00000409952 FRG2Q64ET8 278 aa4.73□□□□□ -1.65
LSM5-205ENST00000409952 CEP85Q6P2H3 762 aa4.73□□□□□ -1.65
LSM5-205ENST00000409952 DLEU7Q6UYE1 221 aa4.73□□□□□ -1.65
LSM5-205ENST00000409952 ZNF573Q86YE8 665 aa4.73□□□□□ -1.65
LSM5-205ENST00000409952 DDIASQ8IXT1 998 aa4.73□□□□□ -1.65
LSM5-205ENST00000409952 MB21D2Q8IYB1 491 aaPredicted RBP4.73□□□□□ -1.65
LSM5-205ENST00000409952 LCORLQ8N3X6 602 aa4.73□□□□□ -1.65
LSM5-205ENST00000409952 EMC1Q8N766 993 aa4.73□□□□□ -1.65
LSM5-205ENST00000409952 FAM133AQ8N9E0 248 aa4.73□□□□□ -1.65
LSM5-205ENST00000409952 GPT2Q8TD30 523 aa4.73□□□□□ -1.65
LSM5-205ENST00000409952 ELP5Q8TE02 316 aa4.73□□□□□ -1.65
LSM5-205ENST00000409952 SLCO4A1Q96BD0 722 aa4.73□□□□□ -1.65
LSM5-205ENST00000409952 GRAMD2BQ96HH9 432 aa4.73□□□□□ -1.65
LSM5-205ENST00000409952 BBC3Q96PG8 261 aaPredicted RBP4.73□□□□□ -1.65
LSM5-205ENST00000409952 ATG10Q9H0Y0 220 aa4.73□□□□□ -1.65
LSM5-205ENST00000409952 NCOR1P1Q9H4R4 102 aa4.73□□□□□ -1.65
LSM5-205ENST00000409952 CATSPERBQ9H7T0 1116 aa4.73□□□□□ -1.65
LSM5-205ENST00000409952 MMP25Q9NPA2 562 aa4.73□□□□□ -1.65
LSM5-205ENST00000409952 KLHL13Q9P2N7 655 aa4.73□□□□□ -1.65
LSM5-205ENST00000409952 RHCGQ9UBD6 479 aa4.73□□□□□ -1.65
LSM5-205ENST00000409952 FAM153AQ9UHL3 310 aa4.73□□□□□ -1.65
LSM5-205ENST00000409952 FOXA2Q9Y261 457 aaPredicted RBP4.73□□□□□ -1.65
LSM5-205ENST00000409952 ASB3Q9Y575 518 aa4.73□□□□□ -1.65
LSM5-205ENST00000409952 FAM230AA0A1W2PPH8 454 aa4.72□□□□□ -1.65
LSM5-205ENST00000409952 NEMP2A6NFY4 417 aa4.72□□□□□ -1.65
LSM5-205ENST00000409952 PLK4O00444 970 aa4.72□□□□□ -1.65
LSM5-205ENST00000409952 CXCL11O14625 94 aa4.72□□□□□ -1.65
LSM5-205ENST00000409952 HS3ST1O14792 307 aa4.72□□□□□ -1.65
LSM5-205ENST00000409952 CASQ2O14958 399 aaPredicted RBP4.72□□□□□ -1.65
LSM5-205ENST00000409952 CYTIPO60759 359 aa4.72□□□□□ -1.65
LSM5-205ENST00000409952 PCCBP05166 539 aa4.72□□□□□ -1.65
LSM5-205ENST00000409952 CHRM5P08912 532 aaPredicted RBP4.72□□□□□ -1.65
LSM5-205ENST00000409952 CCDC159P0C7I6 412 aa4.72□□□□□ -1.65
LSM5-205ENST00000409952 EPCAMP16422 314 aa4.72□□□□□ -1.65
LSM5-205ENST00000409952 UGT1A6P19224 532 aa4.72□□□□□ -1.65
LSM5-205ENST00000409952 CCNCP24863 283 aa4.72□□□□□ -1.65
LSM5-205ENST00000409952 PIK3R1P27986 724 aa4.72□□□□□ -1.65
LSM5-205ENST00000409952 PKLRP30613 574 aa4.72□□□□□ -1.65
LSM5-205ENST00000409952 TNFSF8P32971 234 aa4.72□□□□□ -1.65
LSM5-205ENST00000409952 EIF2S3P41091 472 aaKnown RBP4.72□□□□□ -1.65
LSM5-205ENST00000409952 APOBEC1P41238 236 aaKnown RBP4.72□□□□□ -1.65
LSM5-205ENST00000409952 CDX1P47902 265 aaPredicted RBP4.72□□□□□ -1.65
LSM5-205ENST00000409952 ALDH7A1P49419 539 aaKnown RBP4.72□□□□□ -1.65
LSM5-205ENST00000409952 COMPP49747 757 aaPredicted RBP4.72□□□□□ -1.65
LSM5-205ENST00000409952 BEX3Q00994 111 aa4.72□□□□□ -1.65
LSM5-205ENST00000409952 IL24Q13007 206 aa4.72□□□□□ -1.65
LSM5-205ENST00000409952 ZKSCAN8Q15776 578 aaPredicted RBP4.72□□□□□ -1.65
LSM5-205ENST00000409952 CTU2Q2VPK5 515 aaKnown RBP4.72□□□□□ -1.65
LSM5-205ENST00000409952 CYP4A22Q5TCH4 519 aa4.72□□□□□ -1.65
LSM5-205ENST00000409952 FAM109BQ6ICB4 259 aaPredicted RBP4.72□□□□□ -1.65
LSM5-205ENST00000409952 PRSS55Q6UWB4 352 aaPredicted RBP4.72□□□□□ -1.65
LSM5-205ENST00000409952 B3GLCTQ6Y288 498 aa4.72□□□□□ -1.65
LSM5-205ENST00000409952 TMPRSS11FQ6ZWK6 438 aa4.72□□□□□ -1.65
LSM5-205ENST00000409952 ADGRF4Q8IZF3 695 aa4.72□□□□□ -1.65
LSM5-205ENST00000409952 BEST3Q8N1M1 668 aa4.72□□□□□ -1.65
LSM5-205ENST00000409952 GCSAMQ8N6F7 178 aa4.72□□□□□ -1.65
LSM5-205ENST00000409952 KIAA0895Q8NCT3 520 aa4.72□□□□□ -1.65
LSM5-205ENST00000409952 OR56B2PQ8NGI1 322 aa4.72□□□□□ -1.65
LSM5-205ENST00000409952 OR56B1Q8NGI3 324 aa4.72□□□□□ -1.65
LSM5-205ENST00000409952 SLC9A6Q92581 669 aa4.72□□□□□ -1.65
LSM5-205ENST00000409952 SYN2Q92777 582 aaPredicted RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms