RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 TMED2Q15363 201 aa17.1■□□□□ 0.33
LSM5-204ENST00000409909 NEPROQ6NW34 567 aa17.1■□□□□ 0.33
LSM5-204ENST00000409909 UNC5DQ6UXZ4 953 aa17.1■□□□□ 0.33
LSM5-204ENST00000409909 CENPUQ71F23 418 aa17.1■□□□□ 0.33
LSM5-204ENST00000409909 TMEM135Q86UB9 458 aa17.1■□□□□ 0.33
LSM5-204ENST00000409909 CILP2Q8IUL8 1156 aa17.1■□□□□ 0.33
LSM5-204ENST00000409909 FAM20CQ8IXL6 584 aa17.1■□□□□ 0.33
LSM5-204ENST00000409909 C2orf73Q8N5S3 287 aaPredicted RBP17.1■□□□□ 0.33
LSM5-204ENST00000409909 C19orf47Q8N9M1 422 aaKnown RBP17.1■□□□□ 0.33
LSM5-204ENST00000409909 PDLIM2Q96JY6 352 aa17.1■□□□□ 0.33
LSM5-204ENST00000409909 IL17FQ96PD4 163 aa17.1■□□□□ 0.33
LSM5-204ENST00000409909 PANX3Q96QZ0 392 aa17.1■□□□□ 0.33
LSM5-204ENST00000409909 ADNPQ9H2P0 1102 aa17.1■□□□□ 0.33
LSM5-204ENST00000409909 ACTL8Q9H568 366 aa17.1■□□□□ 0.33
LSM5-204ENST00000409909 FANCEQ9HB96 536 aa17.1■□□□□ 0.33
LSM5-204ENST00000409909 GALPQ9UBC7 116 aa17.1■□□□□ 0.33
LSM5-204ENST00000409909 CRYL1Q9Y2S2 319 aa17.1■□□□□ 0.33
LSM5-204ENST00000409909 NFS1Q9Y697 457 aa17.1■□□□□ 0.33
LSM5-204ENST00000409909 ZCWPW2A0A1B0GU75 182 aa17.09■□□□□ 0.33
LSM5-204ENST00000409909 MAGEB16A2A368 324 aa17.09■□□□□ 0.33
LSM5-204ENST00000409909 ISM1B1AKI9 464 aa17.09■□□□□ 0.33
LSM5-204ENST00000409909 H3BMH7 237 aa17.09■□□□□ 0.33
LSM5-204ENST00000409909 MEN1O00255 615 aa17.09■□□□□ 0.33
LSM5-204ENST00000409909 MAP3K7O43318 606 aa17.09■□□□□ 0.33
LSM5-204ENST00000409909 NIPSNAP2O75323 286 aa17.09■□□□□ 0.33
LSM5-204ENST00000409909 F7P08709 466 aaPredicted RBP17.09■□□□□ 0.33
LSM5-204ENST00000409909 SFTPCP11686 197 aa17.09■□□□□ 0.33
LSM5-204ENST00000409909 RORAP35398 523 aa17.09■□□□□ 0.33
LSM5-204ENST00000409909 GABRA4P48169 554 aa17.09■□□□□ 0.33
LSM5-204ENST00000409909 RAB28P51157 221 aa17.09■□□□□ 0.33
LSM5-204ENST00000409909 ADARP55265 1226 aaKnown RBP17.09■□□□□ 0.33
LSM5-204ENST00000409909 RPS18P62269 152 aaKnown RBP17.09■□□□□ 0.33
LSM5-204ENST00000409909 KCNAB2Q13303 367 aa17.09■□□□□ 0.33
LSM5-204ENST00000409909 DHX34Q14147 1143 aaKnown RBP17.09■□□□□ 0.33
LSM5-204ENST00000409909 KIR2DS3Q14952 304 aa17.09■□□□□ 0.33
LSM5-204ENST00000409909 OTOAQ7RTW8 1153 aa17.09■□□□□ 0.33
LSM5-204ENST00000409909 HOOK3Q86VS8 718 aa17.09■□□□□ 0.33
LSM5-204ENST00000409909 DCUN1D3Q8IWE4 304 aa17.09■□□□□ 0.33
LSM5-204ENST00000409909 DSELQ8IZU8 1212 aa17.09■□□□□ 0.33
LSM5-204ENST00000409909 GRK7Q8WTQ7 553 aa17.09■□□□□ 0.33
LSM5-204ENST00000409909 MR1Q95460 341 aa17.09■□□□□ 0.33
LSM5-204ENST00000409909 ZNF669Q96BR6 464 aaPredicted RBP17.09■□□□□ 0.33
LSM5-204ENST00000409909 FAM136AQ96C01 138 aa17.09■□□□□ 0.33
LSM5-204ENST00000409909 TCTN2Q96GX1 697 aa17.09■□□□□ 0.33
LSM5-204ENST00000409909 SIGLEC10Q96LC7 697 aa17.09■□□□□ 0.33
LSM5-204ENST00000409909 LRFN5Q96NI6 719 aa17.09■□□□□ 0.33
LSM5-204ENST00000409909 GPR87Q9BY21 358 aa17.09■□□□□ 0.33
LSM5-204ENST00000409909 CHRNA10Q9GZZ6 450 aa17.09■□□□□ 0.33
LSM5-204ENST00000409909 CHST8Q9H2A9 424 aa17.09■□□□□ 0.33
LSM5-204ENST00000409909 SAMD15Q9P1V8 674 aa17.09■□□□□ 0.33
LSM5-204ENST00000409909 SERTAD3Q9UJW9 196 aa17.09■□□□□ 0.33
LSM5-204ENST00000409909 RUVBL2Q9Y230 463 aaKnown RBP17.09■□□□□ 0.33
LSM5-204ENST00000409909 A0A0J9YY10 115 aa17.08■□□□□ 0.32
LSM5-204ENST00000409909 GOLGA6L10A0A0M3HER8 536 aa17.08■□□□□ 0.32
LSM5-204ENST00000409909 KRT87PA6NCN2 255 aa17.08■□□□□ 0.32
LSM5-204ENST00000409909 KPNA5O15131 536 aa17.08■□□□□ 0.32
LSM5-204ENST00000409909 KDM1AO60341 852 aa17.08■□□□□ 0.32
LSM5-204ENST00000409909 S1PR4O95977 384 aa17.08■□□□□ 0.32
LSM5-204ENST00000409909 ESR1P03372 595 aa17.08■□□□□ 0.32
LSM5-204ENST00000409909 RPN2P04844 631 aa17.08■□□□□ 0.32
LSM5-204ENST00000409909 CTSBP07858 339 aa17.08■□□□□ 0.32
LSM5-204ENST00000409909 PAMP19021 973 aa17.08■□□□□ 0.32
LSM5-204ENST00000409909 OGNP20774 298 aaKnown RBP17.08■□□□□ 0.32
LSM5-204ENST00000409909 CYP2A7P20853 494 aa17.08■□□□□ 0.32
LSM5-204ENST00000409909 CD9P21926 228 aa17.08■□□□□ 0.32
LSM5-204ENST00000409909 PTPN4P29074 926 aa17.08■□□□□ 0.32
LSM5-204ENST00000409909 ITGA1P56199 1179 aa17.08■□□□□ 0.32
LSM5-204ENST00000409909 NFKB2Q00653 900 aa17.08■□□□□ 0.32
LSM5-204ENST00000409909 GBX1Q14549 363 aa17.08■□□□□ 0.32
LSM5-204ENST00000409909 SLC5A12Q1EHB4 618 aa17.08■□□□□ 0.32
LSM5-204ENST00000409909 CCSMST1Q4G0I0 132 aa17.08■□□□□ 0.32
LSM5-204ENST00000409909 RNF187Q5TA31 235 aaPredicted RBP17.08■□□□□ 0.32
LSM5-204ENST00000409909 RNASEH2BQ5TBB1 312 aaKnown RBP17.08■□□□□ 0.32
LSM5-204ENST00000409909 APOBEC4Q8WW27 367 aaKnown RBP17.08■□□□□ 0.32
LSM5-204ENST00000409909 CLIP3Q96DZ5 547 aa17.08■□□□□ 0.32
LSM5-204ENST00000409909 DDX47Q9H0S4 455 aaKnown RBP17.08■□□□□ 0.32
LSM5-204ENST00000409909 SLC25A18Q9H1K4 315 aa17.08■□□□□ 0.32
LSM5-204ENST00000409909 ACTR5Q9H9F9 607 aaPredicted RBP17.08■□□□□ 0.32
LSM5-204ENST00000409909 PCMTD2Q9NV79 361 aa17.08■□□□□ 0.32
LSM5-204ENST00000409909 KLHL20Q9Y2M5 609 aa17.08■□□□□ 0.32
LSM5-204ENST00000409909 KCNMB2Q9Y691 235 aa17.08■□□□□ 0.32
LSM5-204ENST00000409909 CDC14CA4D256 554 aa17.07■□□□□ 0.32
LSM5-204ENST00000409909 RASGRF2O14827 1237 aa17.07■□□□□ 0.32
LSM5-204ENST00000409909 ZNF749O43361 778 aa17.07■□□□□ 0.32
LSM5-204ENST00000409909 C1orf105O95561 183 aa17.07■□□□□ 0.32
LSM5-204ENST00000409909 RECKO95980 971 aa17.07■□□□□ 0.32
LSM5-204ENST00000409909 CAPN1P07384 714 aa17.07■□□□□ 0.32
LSM5-204ENST00000409909 PPP1R7Q15435 360 aa17.07■□□□□ 0.32
LSM5-204ENST00000409909 DEFB110Q30KQ9 67 aa17.07■□□□□ 0.32
LSM5-204ENST00000409909 ZNF470Q6ECI4 717 aa17.07■□□□□ 0.32
LSM5-204ENST00000409909 SPNS2Q8IVW8 549 aa17.07■□□□□ 0.32
LSM5-204ENST00000409909 DENND6AQ8IWF6 608 aa17.07■□□□□ 0.32
LSM5-204ENST00000409909 PPIL6Q8IXY8 311 aa17.07■□□□□ 0.32
LSM5-204ENST00000409909 DNAJC22Q8N4W6 341 aa17.07■□□□□ 0.32
LSM5-204ENST00000409909 OR2L8Q8NGY9 312 aa17.07■□□□□ 0.32
LSM5-204ENST00000409909 GSDMBQ8TAX9 411 aa17.07■□□□□ 0.32
LSM5-204ENST00000409909 SKA2Q8WVK7 121 aaPredicted RBP17.07■□□□□ 0.32
LSM5-204ENST00000409909 SPRTNQ9H040 489 aaPredicted RBP17.07■□□□□ 0.32
LSM5-204ENST00000409909 TUBD1Q9UJT1 453 aa17.07■□□□□ 0.32
LSM5-204ENST00000409909 PYCARDQ9ULZ3 195 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms