RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 NUFIP1Q9UHK0 495 aaKnown RBP3.05□□□□□ -1.92
RGPD3-202ENST00000409886 CNOT6Q9ULM6 557 aaKnown RBP3.05□□□□□ -1.92
RGPD3-202ENST00000409886 ARHGEF37A1IGU5 675 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 PIPSLA2A3N6 862 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 RRN3P2A6NIE6 340 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 C2CD4BA6NLJ0 364 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 WASHC1A8K0Z3 465 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 H7C0C1 242 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 LUC7L3O95232 432 aaKnown RBP3.05□□□□□ -1.92
RGPD3-202ENST00000409886 NFICP08651 508 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 HLA-EP13747 358 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 DDCP20711 480 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 COL8A2P25067 703 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 E2F1Q01094 437 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 EFR3AQ14156 821 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 CASC4Q6P4E1 433 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 WASH2PQ6VEQ5 465 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 PIWIL4Q7Z3Z4 852 aaKnown RBP3.05□□□□□ -1.92
RGPD3-202ENST00000409886 TMPRSS12Q86WS5 348 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 METTL4Q8N3J2 472 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 GSDMBQ8TAX9 411 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 SYTL5Q8TDW5 730 aaPredicted RBP3.05□□□□□ -1.92
RGPD3-202ENST00000409886 ST8SIA2Q92186 375 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 ATP6V0A1Q93050 837 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 CELF6Q96J87 481 aaKnown RBP3.05□□□□□ -1.92
RGPD3-202ENST00000409886 COX4I2Q96KJ9 171 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 OR5M11Q96RB7 305 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 CITED4Q96RK1 184 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 TIMP4Q99727 224 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 OSBPL10Q9BXB5 764 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 C1QTNF7Q9BXJ2 289 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 TMEM168Q9H0V1 697 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 MMP28Q9H239 520 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 AGO4Q9HCK5 861 aaKnown RBP3.05□□□□□ -1.92
RGPD3-202ENST00000409886 PIGVQ9NUD9 493 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 PAQR5Q9NXK6 330 aaPredicted RBP3.05□□□□□ -1.92
RGPD3-202ENST00000409886 TRPM5Q9NZQ8 1165 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 SRPK3Q9UPE1 567 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 DNAH10Q8IVF4 4471 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 IQANK1A0A1B0GTG1 560 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 HIDE1A8MVS5 230 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 CENPBD1B2RD01 187 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 LAD1O00515 517 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 TFECO14948 347 aaPredicted RBP3.05□□□□□ -1.92
RGPD3-202ENST00000409886 PER2O15055 1255 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 HUS1O60921 280 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 GLRA3O75311 464 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 VAPBO95292 243 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 ENO2P09104 434 aaPredicted RBP3.05□□□□□ -1.92
RGPD3-202ENST00000409886 XBP1P17861 261 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 SLC1A1P43005 524 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 ASPAP45381 313 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 MTPNP58546 118 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 SLC35A2P78381 396 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 C1QBPQ07021 282 aaKnown RBP3.05□□□□□ -1.92
RGPD3-202ENST00000409886 CDH18Q13634 790 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 DSC3Q14574 896 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 KCTD11Q693B1 232 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 PPP4R4Q6NUP7 873 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 CCBE1Q6UXH8 406 aaPredicted RBP3.05□□□□□ -1.92
RGPD3-202ENST00000409886 CENPUQ71F23 418 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 GSTA5Q7RTV2 222 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 PROKR1Q8TCW9 393 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 APH1BQ8WW43 257 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 SEPT1Q8WYJ6 367 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 PPM1MQ96MI6 270 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 OR2A14Q96R47 310 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 SARGQ9BW04 601 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 TMEM206Q9H813 350 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 MCCC2Q9HCC0 563 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 FARSBQ9NSD9 589 aaKnown RBP3.05□□□□□ -1.92
RGPD3-202ENST00000409886 SLC9A2Q9UBY0 812 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 SLC23A1Q9UHI7 598 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 SLC24A2Q9UI40 661 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 DNMT3LQ9UJW3 386 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 PAIP2BQ9ULR5 123 aaKnown RBP3.05□□□□□ -1.92
RGPD3-202ENST00000409886 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.05□□□□□ -1.92
RGPD3-202ENST00000409886 DMTF1Q9Y222 760 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 IFT52Q9Y366 437 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 ATRQ13535 2644 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 LNP1A1A4G5 178 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 ZBTB24O43167 697 aaPredicted RBP3.05□□□□□ -1.92
RGPD3-202ENST00000409886 APOL3O95236 402 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 EGFP01133 1207 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 CDH1P12830 882 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 GPX3P22352 226 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 GNA15P30679 374 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 EVI2BP34910 448 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 DUSP4Q13115 394 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 SETDB1Q15047 1291 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 PON2Q15165 354 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 PCBP1Q15365 356 aaKnown RBP eCLIP3.05□□□□□ -1.92
RGPD3-202ENST00000409886 KRT39Q6A163 491 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 ABHD15Q6UXT9 468 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.05□□□□□ -1.92
RGPD3-202ENST00000409886 ZNF438Q7Z4V0 828 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 MAP4K3Q8IVH8 894 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 RHOT1Q8IXI2 618 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 ZNF567Q8N184 647 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 HDDC3Q8N4P3 179 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms