RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 ATP5A1P25705 553 aaKnown RBP8.26□□□□□ -1.09
SCN9A-203ENST00000409672 MMP14P50281 582 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 CDH12P55289 794 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 VAMP2P63027 116 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 CDK16Q00536 496 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 PRKCDQ05655 676 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 VWA5B1Q5TIE3 1220 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 RAET1LQ5VY80 246 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 SLC25A25Q6KCM7 469 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 DEPDC4Q8N2C3 294 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 ZSCAN5AQ9BUG6 496 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 TMCO1Q9UM00 188 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 NOBOXO60393 691 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 PAPSS2O95340 614 aaPredicted RBP8.26□□□□□ -1.09
SCN9A-203ENST00000409672 CD72P21854 359 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 OR3A3P47888 321 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 OR3A2P47893 321 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 CDH4P55283 916 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 TMEM225Q6GV28 225 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 FSTL5Q8N475 847 aaPredicted RBP8.26□□□□□ -1.09
SCN9A-203ENST00000409672 SPERTQ8NA61 448 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 EBNA1BP2Q99848 306 aaKnown RBP8.26□□□□□ -1.09
SCN9A-203ENST00000409672 OR8D2Q9GZM6 311 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 PDZD7Q9H5P4 517 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 PCDH18Q9HCL0 1135 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 RBMX2Q9Y388 322 aaKnown RBP8.26□□□□□ -1.09
SCN9A-203ENST00000409672 PCP4L1A6NKN8 68 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 MID1O15344 667 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 YY2O15391 372 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 ERI3O43414 337 aaKnown RBP8.26□□□□□ -1.09
SCN9A-203ENST00000409672 LRIG2O94898 1065 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 ATP6V1G2O95670 118 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 AKR1D1P51857 326 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 TARDBPQ13148 414 aaKnown RBP eCLIP8.26□□□□□ -1.09
SCN9A-203ENST00000409672 ADGRE1Q14246 886 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 EPS8L1Q8TE68 723 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 AGAP2Q99490 1192 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 TCF7L1Q9HCS4 588 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 C2CD2Q9Y426 696 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 CA12O43570 354 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 FKBP6O75344 327 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 FASLGP48023 281 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 PSME3P61289 254 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 GRIK2Q13002 908 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 SLC51AQ86UW1 340 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 ZFP3Q96NJ6 502 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 UCKL1Q9NWZ5 548 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 MIOSQ9NXC5 875 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.26□□□□□ -1.09
SCN9A-203ENST00000409672 LOXHD1Q8IVV2 1947 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 WNT9AO14904 365 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 SCO2O43819 266 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 PKMP14618 531 aaKnown RBP8.26□□□□□ -1.09
SCN9A-203ENST00000409672 MPIP34949 423 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 KDM7AQ6ZMT4 941 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 KATNAL2Q8IYT4 538 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 ABCA9Q8IUA7 1624 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 A0A1B0GVM2 712 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 A0A1W2PPM1 405 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 TCAF2A6NFQ2 919 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 VNN2O95498 520 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 METTL18O95568 372 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 ALPPP05187 535 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 HOXC6P09630 235 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 CAPGP40121 348 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 CDH11P55287 796 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 FKBP1BP68106 108 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 SLC3A1Q07837 685 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 VSTM1Q6UX27 236 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 EIF1ADQ8N9N8 165 aaKnown RBP8.25□□□□□ -1.09
SCN9A-203ENST00000409672 ZSWIM3Q96MP5 696 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 NPLQ9BXD5 320 aaPredicted RBP8.25□□□□□ -1.09
SCN9A-203ENST00000409672 A0A1W2PP55 124 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 KCNU1A8MYU2 1149 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 PIGXQ8TBF5 258 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 PPP1R14DQ9NXH3 145 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 RNF13O43567 381 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 TPPPO94811 219 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 OR4F21O95013 312 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 CSF2RAP15509 400 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 RAB8AP61006 207 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 PPIDQ08752 370 aaKnown RBP8.25□□□□□ -1.09
SCN9A-203ENST00000409672 CUZD1Q86UP6 607 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 RASGEF1CQ8N431 466 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 TIFAQ96CG3 184 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 KLHDC7BQ96G42 594 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 VCPIP1Q96JH7 1222 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 UCK2Q9BZX2 261 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 KCNH6Q9H252 994 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 BCAS3Q9H6U6 928 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 FBRSL1Q9HCM7 1045 aaKnown RBP8.25□□□□□ -1.09
SCN9A-203ENST00000409672 B3GAT2Q9NPZ5 323 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 ASTN1O14525 1302 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 DHRS12A0PJE2 317 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 SOX1O00570 391 aaPredicted RBP8.25□□□□□ -1.09
SCN9A-203ENST00000409672 LATO43561 262 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 UROSP10746 265 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 CDK7P50613 346 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 ZNF296Q8WUU4 475 aaPredicted RBP8.25□□□□□ -1.09
SCN9A-203ENST00000409672 NR2F6P10588 404 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms