RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 FNBP1Q96RU3 617 aa3.62□□□□□ -1.83
PMS1-203ENST00000409593 SYT15Q9BQS2 421 aa3.62□□□□□ -1.83
PMS1-203ENST00000409593 MCRIP2Q9BUT9 160 aaKnown RBP3.62□□□□□ -1.83
PMS1-203ENST00000409593 MXD3Q9BW11 206 aa3.62□□□□□ -1.83
PMS1-203ENST00000409593 OPA3Q9H6K4 179 aa3.62□□□□□ -1.83
PMS1-203ENST00000409593 SLC35C2Q9NQQ7 365 aa3.62□□□□□ -1.83
PMS1-203ENST00000409593 GKN1Q9NS71 199 aa3.62□□□□□ -1.83
PMS1-203ENST00000409593 FGF21Q9NSA1 209 aa3.62□□□□□ -1.83
PMS1-203ENST00000409593 CPSF2Q9P2I0 782 aaKnown RBP3.62□□□□□ -1.83
PMS1-203ENST00000409593 CHORDC1Q9UHD1 332 aaPredicted RBP3.62□□□□□ -1.83
PMS1-203ENST00000409593 RNF215Q9Y6U7 377 aa3.62□□□□□ -1.83
PMS1-203ENST00000409593 ZNF541Q9H0D2 1346 aa3.61□□□□□ -1.83
PMS1-203ENST00000409593 NOTCH3Q9UM47 2321 aa3.61□□□□□ -1.83
PMS1-203ENST00000409593 IGKV3D-20A0A0C4DH25 116 aa3.61□□□□□ -1.83
PMS1-203ENST00000409593 ERI2A8K979 691 aaKnown RBP3.61□□□□□ -1.83
PMS1-203ENST00000409593 GPIP06744 558 aa3.61□□□□□ -1.83
PMS1-203ENST00000409593 HSPA8P11142 646 aaKnown RBP3.61□□□□□ -1.83
PMS1-203ENST00000409593 MNDAP41218 407 aa3.61□□□□□ -1.83
PMS1-203ENST00000409593 RPL21P46778 160 aaKnown RBP3.61□□□□□ -1.83
PMS1-203ENST00000409593 KRTAP10-12P60413 245 aa3.61□□□□□ -1.83
PMS1-203ENST00000409593 LMOD3Q0VAK6 560 aa3.61□□□□□ -1.83
PMS1-203ENST00000409593 SQLEQ14534 574 aa3.61□□□□□ -1.83
PMS1-203ENST00000409593 MAPRE1Q15691 268 aaKnown RBP3.61□□□□□ -1.83
PMS1-203ENST00000409593 SNAPC1Q16533 368 aa3.61□□□□□ -1.83
PMS1-203ENST00000409593 UGP2Q16851 508 aa3.61□□□□□ -1.83
PMS1-203ENST00000409593 SGSM1Q2NKQ1 1148 aa3.61□□□□□ -1.83
PMS1-203ENST00000409593 RNASEH2BQ5TBB1 312 aaKnown RBP3.61□□□□□ -1.83
PMS1-203ENST00000409593 MZT2BQ6NZ67 158 aa3.61□□□□□ -1.83
PMS1-203ENST00000409593 PSRC1Q6PGN9 363 aaPredicted RBP3.61□□□□□ -1.83
PMS1-203ENST00000409593 RTN4RL2Q86UN3 420 aa3.61□□□□□ -1.83
PMS1-203ENST00000409593 EID3Q8N140 333 aa3.61□□□□□ -1.83
PMS1-203ENST00000409593 NIPA2Q8N8Q9 360 aa3.61□□□□□ -1.83
PMS1-203ENST00000409593 DBF4BQ8NFT6 615 aa3.61□□□□□ -1.83
PMS1-203ENST00000409593 PHLDA1Q8WV24 401 aaPredicted RBP3.61□□□□□ -1.83
PMS1-203ENST00000409593 DYRK2Q92630 601 aa3.61□□□□□ -1.83
PMS1-203ENST00000409593 PTERQ96BW5 349 aa3.61□□□□□ -1.83
PMS1-203ENST00000409593 SPDL1Q96EA4 605 aa3.61□□□□□ -1.83
PMS1-203ENST00000409593 TRIM51Q9BSJ1 452 aa3.61□□□□□ -1.83
PMS1-203ENST00000409593 CCDC68Q9H2F9 335 aa3.61□□□□□ -1.83
PMS1-203ENST00000409593 EQTNQ9NQ60 294 aa3.61□□□□□ -1.83
PMS1-203ENST00000409593 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.61□□□□□ -1.83
PMS1-203ENST00000409593 SERINC1Q9NRX5 453 aa3.61□□□□□ -1.83
PMS1-203ENST00000409593 NSMCE4AQ9NXX6 385 aa3.61□□□□□ -1.83
PMS1-203ENST00000409593 TAB2Q9NYJ8 693 aa3.61□□□□□ -1.83
PMS1-203ENST00000409593 STK26Q9P289 416 aa3.61□□□□□ -1.83
PMS1-203ENST00000409593 EPHA6Q9UF33 1036 aa3.61□□□□□ -1.83
PMS1-203ENST00000409593 PPIEQ9UNP9 301 aaKnown RBP3.61□□□□□ -1.83
PMS1-203ENST00000409593 NME7Q9Y5B8 376 aa3.61□□□□□ -1.83
PMS1-203ENST00000409593 GLOD5A6NK44 160 aa3.6□□□□□ -1.83
PMS1-203ENST00000409593 BEST1O76090 585 aa3.6□□□□□ -1.83
PMS1-203ENST00000409593 KRT5P13647 590 aa3.6□□□□□ -1.83
PMS1-203ENST00000409593 JAK1P23458 1154 aa3.6□□□□□ -1.83
PMS1-203ENST00000409593 KRTAP10-5P60370 271 aa3.6□□□□□ -1.83
PMS1-203ENST00000409593 KLHL26Q53HC5 615 aa3.6□□□□□ -1.83
PMS1-203ENST00000409593 LACC1Q8IV20 430 aa3.6□□□□□ -1.83
PMS1-203ENST00000409593 ZNF595Q8IYB9 648 aa3.6□□□□□ -1.83
PMS1-203ENST00000409593 ZNF614Q8N883 585 aa3.6□□□□□ -1.83
PMS1-203ENST00000409593 MAPK1IP1LQ8NDC0 245 aa3.6□□□□□ -1.83
PMS1-203ENST00000409593 SSMEM1Q8WWF3 244 aa3.6□□□□□ -1.83
PMS1-203ENST00000409593 NXNL1Q96CM4 212 aa3.6□□□□□ -1.83
PMS1-203ENST00000409593 SFXN2Q96NB2 322 aa3.6□□□□□ -1.83
PMS1-203ENST00000409593 IWS1Q96ST2 819 aa3.6□□□□□ -1.83
PMS1-203ENST00000409593 CLEC7AQ9BXN2 247 aa3.6□□□□□ -1.83
PMS1-203ENST00000409593 MRPL1Q9BYD6 325 aaKnown RBP3.6□□□□□ -1.83
PMS1-203ENST00000409593 TRIM15Q9C019 465 aa3.6□□□□□ -1.83
PMS1-203ENST00000409593 ZNF701Q9NV72 531 aaPredicted RBP3.6□□□□□ -1.83
PMS1-203ENST00000409593 P4HTMQ9NXG6 502 aa3.6□□□□□ -1.83
PMS1-203ENST00000409593 WDR37Q9Y2I8 494 aa3.6□□□□□ -1.83
PMS1-203ENST00000409593 PRSS21Q9Y6M0 314 aa3.6□□□□□ -1.83
PMS1-203ENST00000409593 CACNA1FO60840 1977 aa3.6□□□□□ -1.83
PMS1-203ENST00000409593 PCDH11YQ9BZA8 1340 aa3.6□□□□□ -1.83
PMS1-203ENST00000409593 H7C423 109 aa3.59□□□□□ -1.83
PMS1-203ENST00000409593 ZNF195O14628 629 aa3.59□□□□□ -1.83
PMS1-203ENST00000409593 DFFBO76075 338 aa3.59□□□□□ -1.83
PMS1-203ENST00000409593 CLDN1O95832 211 aa3.59□□□□□ -1.83
PMS1-203ENST00000409593 IGHV4-31P0DP07 118 aa3.59□□□□□ -1.83
PMS1-203ENST00000409593 CDH3P22223 829 aa3.59□□□□□ -1.83
PMS1-203ENST00000409593 LMAN1P49257 510 aa3.59□□□□□ -1.83
PMS1-203ENST00000409593 ZNF415Q09FC8 603 aa3.59□□□□□ -1.83
PMS1-203ENST00000409593 E2F5Q15329 346 aa3.59□□□□□ -1.83
PMS1-203ENST00000409593 ODF4Q2M2E3 257 aa3.59□□□□□ -1.83
PMS1-203ENST00000409593 XKR6Q5GH73 641 aa3.59□□□□□ -1.83
PMS1-203ENST00000409593 SPATA1Q5VX52 437 aa3.59□□□□□ -1.83
PMS1-203ENST00000409593 DNAAF5Q86Y56 855 aa3.59□□□□□ -1.83
PMS1-203ENST00000409593 LSMEM2Q8N112 164 aa3.59□□□□□ -1.83
PMS1-203ENST00000409593 SYN2Q92777 582 aaPredicted RBP3.59□□□□□ -1.83
PMS1-203ENST00000409593 SLAMF9Q96A28 289 aa3.59□□□□□ -1.83
PMS1-203ENST00000409593 TMCO6Q96DC7 493 aa3.59□□□□□ -1.83
PMS1-203ENST00000409593 SPACA9Q96E40 222 aaPredicted RBP3.59□□□□□ -1.83
PMS1-203ENST00000409593 C18orf12Q96KH6 178 aa3.59□□□□□ -1.83
PMS1-203ENST00000409593 ABHD1Q96SE0 405 aa3.59□□□□□ -1.83
PMS1-203ENST00000409593 FUCA2Q9BTY2 467 aa3.59□□□□□ -1.83
PMS1-203ENST00000409593 MAF1Q9H063 256 aa3.59□□□□□ -1.83
PMS1-203ENST00000409593 MIS12Q9H081 205 aa3.59□□□□□ -1.83
PMS1-203ENST00000409593 GOLPH3LQ9H4A5 285 aa3.59□□□□□ -1.83
PMS1-203ENST00000409593 RNF186Q9NXI6 227 aa3.59□□□□□ -1.83
PMS1-203ENST00000409593 SPHK1Q9NYA1 384 aa3.59□□□□□ -1.83
PMS1-203ENST00000409593 RPS6KA6Q9UK32 745 aa3.59□□□□□ -1.83
PMS1-203ENST00000409593 TNNQ9UQP3 1299 aa3.59□□□□□ -1.83
PMS1-203ENST00000409593 SNX8Q9Y5X2 465 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms