RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 ACTL8Q9H568 366 aa20.18■□□□□ 0.82
USP39-203ENST00000409470 EPHX3Q9H6B9 360 aa20.18■□□□□ 0.82
USP39-203ENST00000409470 COPS7BQ9H9Q2 264 aaPredicted RBP20.18■□□□□ 0.82
USP39-203ENST00000409470 CMTM6Q9NX76 183 aa20.18■□□□□ 0.82
USP39-203ENST00000409470 GMPR2Q9P2T1 348 aaKnown RBP20.18■□□□□ 0.82
USP39-203ENST00000409470 KIF26AQ9ULI4 1882 aaPredicted RBP20.18■□□□□ 0.82
USP39-203ENST00000409470 CASQ2O14958 399 aaPredicted RBP20.17■□□□□ 0.82
USP39-203ENST00000409470 P2RY2P41231 377 aa20.17■□□□□ 0.82
USP39-203ENST00000409470 GRIA2P42262 883 aa20.17■□□□□ 0.82
USP39-203ENST00000409470 HALP42357 657 aa20.17■□□□□ 0.82
USP39-203ENST00000409470 CLNS1AP54105 237 aaKnown RBP20.17■□□□□ 0.82
USP39-203ENST00000409470 GTF2H3Q13889 308 aa20.17■□□□□ 0.82
USP39-203ENST00000409470 CACHD1Q5VU97 1274 aa20.17■□□□□ 0.82
USP39-203ENST00000409470 FOXJ1Q92949 421 aa20.17■□□□□ 0.82
USP39-203ENST00000409470 ZBTB18Q99592 522 aa20.17■□□□□ 0.82
USP39-203ENST00000409470 HDAC8Q9BY41 377 aa20.17■□□□□ 0.82
USP39-203ENST00000409470 C1orf109Q9NX04 203 aa20.17■□□□□ 0.82
USP39-203ENST00000409470 HCN2Q9UL51 889 aa20.17■□□□□ 0.82
USP39-203ENST00000409470 MYO9BQ13459 2157 aa20.17■□□□□ 0.82
USP39-203ENST00000409470 CEP290O15078 2479 aa20.17■□□□□ 0.82
USP39-203ENST00000409470 ANKRD28O15084 1053 aa20.17■□□□□ 0.82
USP39-203ENST00000409470 APODP05090 189 aa20.17■□□□□ 0.82
USP39-203ENST00000409470 C8BP07358 591 aa20.17■□□□□ 0.82
USP39-203ENST00000409470 JAK1P23458 1154 aa20.17■□□□□ 0.82
USP39-203ENST00000409470 EIF2DP41214 584 aaKnown RBP20.17■□□□□ 0.82
USP39-203ENST00000409470 MAPK9P45984 424 aa20.17■□□□□ 0.82
USP39-203ENST00000409470 BDKRB1P46663 353 aa20.17■□□□□ 0.82
USP39-203ENST00000409470 PFN3P60673 137 aa20.17■□□□□ 0.82
USP39-203ENST00000409470 CNTN1Q12860 1018 aa20.17■□□□□ 0.82
USP39-203ENST00000409470 GRAMD1BQ3KR37 738 aa20.17■□□□□ 0.82
USP39-203ENST00000409470 BCL7AQ4VC05 210 aa20.17■□□□□ 0.82
USP39-203ENST00000409470 FAM46CQ5VWP2 391 aa20.17■□□□□ 0.82
USP39-203ENST00000409470 SLC2A7Q6PXP3 512 aa20.17■□□□□ 0.82
USP39-203ENST00000409470 NUDT18Q6ZVK8 323 aa20.17■□□□□ 0.82
USP39-203ENST00000409470 SLC22A15Q8IZD6 547 aa20.17■□□□□ 0.82
USP39-203ENST00000409470 L3MBTL4Q8NA19 623 aa20.17■□□□□ 0.82
USP39-203ENST00000409470 ATL1Q8WXF7 558 aa20.17■□□□□ 0.82
USP39-203ENST00000409470 CHFRQ96EP1 664 aa20.17■□□□□ 0.82
USP39-203ENST00000409470 CCDC138Q96M89 665 aa20.17■□□□□ 0.82
USP39-203ENST00000409470 ACPTQ9BZG2 426 aa20.17■□□□□ 0.82
USP39-203ENST00000409470 H3BM21 787 aa20.16■□□□□ 0.82
USP39-203ENST00000409470 PDHA2P29803 388 aa20.16■□□□□ 0.82
USP39-203ENST00000409470 WASP42768 502 aa20.16■□□□□ 0.82
USP39-203ENST00000409470 RHDQ02161 417 aa20.16■□□□□ 0.82
USP39-203ENST00000409470 DPTQ07507 201 aa20.16■□□□□ 0.82
USP39-203ENST00000409470 ADGRE1Q14246 886 aa20.16■□□□□ 0.82
USP39-203ENST00000409470 PTGR1Q14914 329 aa20.16■□□□□ 0.82
USP39-203ENST00000409470 PARM1Q6UWI2 310 aa20.16■□□□□ 0.82
USP39-203ENST00000409470 CACUL1Q86Y37 369 aa20.16■□□□□ 0.82
USP39-203ENST00000409470 CFAP206Q8IYR0 622 aa20.16■□□□□ 0.82
USP39-203ENST00000409470 LIX1Q8N485 282 aa20.16■□□□□ 0.82
USP39-203ENST00000409470 RAB7BQ96AH8 199 aa20.16■□□□□ 0.82
USP39-203ENST00000409470 TRIM8Q9BZR9 551 aa20.16■□□□□ 0.82
USP39-203ENST00000409470 TRIM39Q9HCM9 518 aa20.16■□□□□ 0.82
USP39-203ENST00000409470 CIDEBQ9UHD4 219 aa20.16■□□□□ 0.82
USP39-203ENST00000409470 PCDHA9Q9Y5H5 950 aa20.16■□□□□ 0.82
USP39-203ENST00000409470 DOCK8Q8NF50 2099 aa20.16■□□□□ 0.82
USP39-203ENST00000409470 ZFC3H1O60293 1989 aaKnown RBP20.16■□□□□ 0.82
USP39-203ENST00000409470 KCNE1BA0A087WTH5 132 aa20.15■□□□□ 0.82
USP39-203ENST00000409470 PRSS51A0A1B0GVH4 220 aa20.15■□□□□ 0.82
USP39-203ENST00000409470 IFRD1O00458 451 aaPredicted RBP20.15■□□□□ 0.82
USP39-203ENST00000409470 CLGNO14967 610 aa20.15■□□□□ 0.82
USP39-203ENST00000409470 RSL1D1O76021 490 aaKnown RBP20.15■□□□□ 0.82
USP39-203ENST00000409470 HSD17B1P14061 328 aa20.15■□□□□ 0.82
USP39-203ENST00000409470 VARSP26640 1264 aaKnown RBP20.15■□□□□ 0.82
USP39-203ENST00000409470 NEK2P51955 445 aa20.15■□□□□ 0.82
USP39-203ENST00000409470 YBX1P67809 324 aaKnown RBP20.15■□□□□ 0.82
USP39-203ENST00000409470 CHIT1Q13231 466 aa20.15■□□□□ 0.82
USP39-203ENST00000409470 CES5AQ6NT32 575 aa20.15■□□□□ 0.82
USP39-203ENST00000409470 PDSS2Q86YH6 399 aa20.15■□□□□ 0.82
USP39-203ENST00000409470 PLCD3Q8N3E9 789 aa20.15■□□□□ 0.82
USP39-203ENST00000409470 TMEM125Q96AQ2 219 aa20.15■□□□□ 0.82
USP39-203ENST00000409470 ELSPBP1Q96BH3 223 aa20.15■□□□□ 0.82
USP39-203ENST00000409470 MED8Q96G25 268 aa20.15■□□□□ 0.82
USP39-203ENST00000409470 MAGEB10Q96LZ2 347 aaPredicted RBP20.15■□□□□ 0.82
USP39-203ENST00000409470 DPY30Q9C005 99 aa20.15■□□□□ 0.82
USP39-203ENST00000409470 SLAMF8Q9P0V8 285 aa20.15■□□□□ 0.82
USP39-203ENST00000409470 FADS3Q9Y5Q0 445 aa20.15■□□□□ 0.82
USP39-203ENST00000409470 STON1Q9Y6Q2 735 aa20.15■□□□□ 0.82
USP39-203ENST00000409470 NPPAP01160 153 aa20.15■□□□□ 0.82
USP39-203ENST00000409470 DGKQP52824 942 aa20.15■□□□□ 0.82
USP39-203ENST00000409470 BNIP2Q12982 314 aa20.15■□□□□ 0.82
USP39-203ENST00000409470 NAE1Q13564 534 aa20.15■□□□□ 0.82
USP39-203ENST00000409470 AAK1Q2M2I8 961 aa20.15■□□□□ 0.82
USP39-203ENST00000409470 ITPRIPL2Q3MIP1 535 aa20.15■□□□□ 0.82
USP39-203ENST00000409470 CCSMST1Q4G0I0 132 aa20.15■□□□□ 0.82
USP39-203ENST00000409470 RABL3Q5HYI8 236 aa20.15■□□□□ 0.82
USP39-203ENST00000409470 OGFRL1Q5TC84 451 aaPredicted RBP20.15■□□□□ 0.82
USP39-203ENST00000409470 AGTRAPQ6RW13 159 aa20.15■□□□□ 0.82
USP39-203ENST00000409470 THOC6Q86W42 341 aaKnown RBP20.15■□□□□ 0.82
USP39-203ENST00000409470 CHPFQ8IZ52 775 aa20.15■□□□□ 0.82
USP39-203ENST00000409470 FGF14Q92915 247 aa20.15■□□□□ 0.82
USP39-203ENST00000409470 TRIM15Q9C019 465 aa20.15■□□□□ 0.82
USP39-203ENST00000409470 STOX2Q9P2F5 926 aaPredicted RBP20.15■□□□□ 0.82
USP39-203ENST00000409470 ATXN10Q9UBB4 475 aa20.15■□□□□ 0.82
USP39-203ENST00000409470 AP4S1Q9Y587 144 aa20.15■□□□□ 0.82
USP39-203ENST00000409470 LIN7AO14910 233 aaPredicted RBP20.14■□□□□ 0.81
USP39-203ENST00000409470 IRF8Q02556 426 aa20.14■□□□□ 0.81
USP39-203ENST00000409470 SPATS1Q496A3 300 aa20.14■□□□□ 0.81
USP39-203ENST00000409470 SFT2D3Q587I9 215 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms