RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 CAPN7Q9Y6W3 813 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 PRSS38A1L453 326 aa13.68□□□□□ -0.22
GPNMB-203ENST00000409458 SCAMP1O15126 338 aa13.68□□□□□ -0.22
GPNMB-203ENST00000409458 CHEK2O96017 543 aa13.68□□□□□ -0.22
GPNMB-203ENST00000409458 ESRRAP11474 423 aaPredicted RBP13.68□□□□□ -0.22
GPNMB-203ENST00000409458 HGFP14210 728 aa13.68□□□□□ -0.22
GPNMB-203ENST00000409458 CD1EP15812 388 aa13.68□□□□□ -0.22
GPNMB-203ENST00000409458 GNPDA1P46926 289 aa13.68□□□□□ -0.22
GPNMB-203ENST00000409458 KLF10Q13118 480 aa13.68□□□□□ -0.22
GPNMB-203ENST00000409458 NAA25Q14CX7 972 aa13.68□□□□□ -0.22
GPNMB-203ENST00000409458 XKR7Q5GH72 579 aa13.68□□□□□ -0.22
GPNMB-203ENST00000409458 UNC5DQ6UXZ4 953 aa13.68□□□□□ -0.22
GPNMB-203ENST00000409458 CHSY3Q70JA7 882 aa13.68□□□□□ -0.22
GPNMB-203ENST00000409458 KLHDC8AQ8IYD2 350 aa13.68□□□□□ -0.22
GPNMB-203ENST00000409458 PPFIBP2Q8ND30 876 aa13.68□□□□□ -0.22
GPNMB-203ENST00000409458 OR2T11Q8NH01 316 aa13.68□□□□□ -0.22
GPNMB-203ENST00000409458 METTL6Q8TCB7 284 aa13.68□□□□□ -0.22
GPNMB-203ENST00000409458 RLN3Q8WXF3 142 aa13.68□□□□□ -0.22
GPNMB-203ENST00000409458 ATL1Q8WXF7 558 aa13.68□□□□□ -0.22
GPNMB-203ENST00000409458 KLHL29Q96CT2 875 aa13.68□□□□□ -0.22
GPNMB-203ENST00000409458 MED8Q96G25 268 aa13.68□□□□□ -0.22
GPNMB-203ENST00000409458 SCARF2Q96GP6 870 aaPredicted RBP13.68□□□□□ -0.22
GPNMB-203ENST00000409458 TUBB6Q9BUF5 446 aa13.68□□□□□ -0.22
GPNMB-203ENST00000409458 WSB2Q9NYS7 404 aaPredicted RBP13.68□□□□□ -0.22
GPNMB-203ENST00000409458 TRPS1Q9UHF7 1281 aa13.68□□□□□ -0.22
GPNMB-203ENST00000409458 KCNK6Q9Y257 313 aa13.68□□□□□ -0.22
GPNMB-203ENST00000409458 ASF1AQ9Y294 204 aa13.68□□□□□ -0.22
GPNMB-203ENST00000409458 RNF11Q9Y3C5 154 aa13.68□□□□□ -0.22
GPNMB-203ENST00000409458 GPSM3Q9Y4H4 160 aa13.68□□□□□ -0.22
GPNMB-203ENST00000409458 COL6A3P12111 3177 aa13.68□□□□□ -0.22
GPNMB-203ENST00000409458 PRR19A6NJB7 356 aa13.67□□□□□ -0.22
GPNMB-203ENST00000409458 ALDOCP09972 364 aaKnown RBP13.67□□□□□ -0.22
GPNMB-203ENST00000409458 EBLN1P0CF75 366 aa13.67□□□□□ -0.22
GPNMB-203ENST00000409458 RPL10P27635 214 aaKnown RBP13.67□□□□□ -0.22
GPNMB-203ENST00000409458 PIK3R1P27986 724 aa13.67□□□□□ -0.22
GPNMB-203ENST00000409458 CD6P30203 668 aa13.67□□□□□ -0.22
GPNMB-203ENST00000409458 HMOX2P30519 316 aa13.67□□□□□ -0.22
GPNMB-203ENST00000409458 AKT2P31751 481 aa13.67□□□□□ -0.22
GPNMB-203ENST00000409458 CCR5P51681 352 aa13.67□□□□□ -0.22
GPNMB-203ENST00000409458 KCNJ2P63252 427 aa13.67□□□□□ -0.22
GPNMB-203ENST00000409458 NAE1Q13564 534 aa13.67□□□□□ -0.22
GPNMB-203ENST00000409458 RINLQ6ZS11 566 aa13.67□□□□□ -0.22
GPNMB-203ENST00000409458 THOC6Q86W42 341 aaKnown RBP13.67□□□□□ -0.22
GPNMB-203ENST00000409458 POU5F2Q8N7G0 328 aa13.67□□□□□ -0.22
GPNMB-203ENST00000409458 TMEM145Q8NBT3 493 aa13.67□□□□□ -0.22
GPNMB-203ENST00000409458 OR5AR1Q8NGP9 310 aa13.67□□□□□ -0.22
GPNMB-203ENST00000409458 OR56A3Q8NH54 315 aa13.67□□□□□ -0.22
GPNMB-203ENST00000409458 OR1E3Q8WZA6 343 aa13.67□□□□□ -0.22
GPNMB-203ENST00000409458 TUBGCP3Q96CW5 907 aa13.67□□□□□ -0.22
GPNMB-203ENST00000409458 PDXPQ96GD0 296 aa13.67□□□□□ -0.22
GPNMB-203ENST00000409458 GPR174Q9BXC1 333 aa13.67□□□□□ -0.22
GPNMB-203ENST00000409458 OSGEPL1Q9H4B0 414 aa13.67□□□□□ -0.22
GPNMB-203ENST00000409458 THEGQ9P2T0 379 aa13.67□□□□□ -0.22
GPNMB-203ENST00000409458 WDR37Q9Y2I8 494 aa13.67□□□□□ -0.22
GPNMB-203ENST00000409458 CFAP20Q9Y6A4 193 aaKnown RBP13.67□□□□□ -0.22
GPNMB-203ENST00000409458 LRP4O75096 1905 aa13.67□□□□□ -0.22
GPNMB-203ENST00000409458 KCNE1BA0A087WTH5 132 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 IGHV1OR15-9A0A0B4J2B8 117 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 KLHL33A6NCF5 533 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 FFAR3O14843 346 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 UBDO15205 165 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 GPR42O15529 346 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 PRAMEF4O60810 478 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 HNRNPCL1O60812 293 aaKnown RBP13.66□□□□□ -0.22
GPNMB-203ENST00000409458 SLC35G4P0C7Q5 338 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 PRR35P0CG20 571 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 OXTRP30559 389 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 CLCNKAP51800 687 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 GRB7Q14451 532 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 PRAMEF9Q5VWM5 478 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 DUS1LQ6P1R4 473 aaKnown RBP13.66□□□□□ -0.22
GPNMB-203ENST00000409458 IL27RAQ6UWB1 636 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 ENPP7Q6UWV6 458 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 DCUN1D3Q8IWE4 304 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 FAM160A2Q8N612 972 aaPredicted RBP13.66□□□□□ -0.22
GPNMB-203ENST00000409458 PHC3Q8NDX5 983 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 PJA1Q8NG27 643 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 OR9A1PQ8NGU1 263 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 ZNF480Q8WV37 535 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 BIRC7Q96CA5 298 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 WDR92Q96MX6 357 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 OR2M4Q96R27 311 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 OR4K3Q96R72 315 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 HBEGFQ99075 208 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 NELL2Q99435 816 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 ACTR8Q9H981 624 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 CARS2Q9HA77 564 aaKnown RBP13.66□□□□□ -0.22
GPNMB-203ENST00000409458 INTS7Q9NVH2 962 aaKnown RBP13.66□□□□□ -0.22
GPNMB-203ENST00000409458 PNMA8BQ9ULN7 279 aaPredicted RBP13.66□□□□□ -0.22
GPNMB-203ENST00000409458 PLAGL1Q9UM63 463 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 MEI4A8MW99 385 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 IFRD1O00458 451 aaPredicted RBP13.66□□□□□ -0.22
GPNMB-203ENST00000409458 CLDN9O95484 217 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 PTPN4P29074 926 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 PXNP49023 591 aaPredicted RBP13.66□□□□□ -0.22
GPNMB-203ENST00000409458 TBPL1P62380 186 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 SQLEQ14534 574 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 ABRAXAS2Q15018 415 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 GGTA1PQ4G0N0 100 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 CAPRIN2Q6IMN6 1127 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms