RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 FAM186AA6NE01 2351 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 H0YJX3 145 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 SYN3O14994 580 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 DMPKQ09013 629 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 CYBRD1Q53TN4 286 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 GALNT18Q6P9A2 607 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 DPY19L3Q6ZPD9 716 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 CCDC80Q76M96 950 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 GOLGA7Q7Z5G4 137 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 OR5AK3PQ8NH89 298 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 NRBF2Q96F24 287 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 ZNF599Q96NL3 588 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 SEZ6LQ9BYH1 1024 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 ABCD2Q9UBJ2 740 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 ADGRE2Q9UHX3 823 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 ZNF225Q9UK10 706 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 VPS4BO75351 444 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 BCL10O95999 233 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 EPB42P16452 691 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 OGNP20774 298 aaKnown RBP13.1□□□□□ -0.31
COL6A2-204ENST00000409416 SHMT2P34897 504 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 IRF8Q02556 426 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 RCAN2Q14206 197 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 SLC14A2Q15849 920 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 MEP1AQ16819 746 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 ATP13A5Q4VNC0 1218 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 SFRP1Q8N474 314 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 DDHD1Q8NEL9 900 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 OR2T12Q8NG77 320 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 ZNF461Q8TAF7 563 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 PSKH2Q96QS6 385 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 UHRF1Q96T88 793 aaPredicted RBP13.1□□□□□ -0.31
COL6A2-204ENST00000409416 LRRC3Q9BY71 257 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 KIF17Q9P2E2 1029 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 SPAG17Q6Q759 2223 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 TBC1D4O60343 1298 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 C1QCP02747 245 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 ANXA6P08133 673 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 HRH2P25021 359 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 SLC26A3P40879 764 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 RFX3P48380 749 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 EMP3P54852 163 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 NFKB2Q00653 900 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 LMAN2Q12907 356 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 PCBP2Q15366 365 aaKnown RBP eCLIP13.09□□□□□ -0.31
COL6A2-204ENST00000409416 ADNP2Q6IQ32 1131 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 ZNF555Q8NEP9 628 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 RHEBL1Q8TAI7 183 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 SPPL2AQ8TCT8 520 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 PROKR1Q8TCW9 393 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 IGSF21Q96ID5 467 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 COPS8Q99627 209 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 COMMD8Q9NX08 183 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 RAPGEFL1Q9UHV5 662 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 EIF3LQ9Y262 564 aaKnown RBP13.09□□□□□ -0.31
COL6A2-204ENST00000409416 Q9Y3F1 56 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.09□□□□□ -0.31
COL6A2-204ENST00000409416 NPIPB15A6NHN6 443 aaPredicted RBP13.09□□□□□ -0.31
COL6A2-204ENST00000409416 G3V2T6 193 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 ACOX3O15254 700 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 THRBP10828 461 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 TCF3P15923 654 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 SERPINA4P29622 427 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 NNMTP40261 264 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 ETV3P41162 512 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 RNF144AP50876 292 aaPredicted RBP13.09□□□□□ -0.31
COL6A2-204ENST00000409416 DSC1Q08554 894 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 ELAVL2Q12926 359 aaKnown RBP13.09□□□□□ -0.31
COL6A2-204ENST00000409416 EIF4EBP2Q13542 120 aaPredicted RBP13.09□□□□□ -0.31
COL6A2-204ENST00000409416 XKR6Q5GH73 641 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 HID1Q8IV36 788 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 OTULINQ96BN8 352 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 TOR3AQ9H497 397 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 INTS10Q9NVR2 710 aaKnown RBP13.09□□□□□ -0.31
COL6A2-204ENST00000409416 MBD1Q9UIS9 605 aaPredicted RBP13.09□□□□□ -0.31
COL6A2-204ENST00000409416 PNMA8CA0A1B0GUJ8 204 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 FAM234BA2RU67 622 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 LZTS3O60299 673 aaPredicted RBP13.09□□□□□ -0.31
COL6A2-204ENST00000409416 FTH1P02794 183 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 CCNA2P20248 432 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 ARSFP54793 590 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 NR1D2Q14995 579 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 PERM1Q5SV97 790 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 C6orf183Q5T699 404 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 OR4F3Q6IEY1 312 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 PLD3Q8IV08 490 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 MFSD2AQ8NA29 543 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 FNDC8Q8TC99 324 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 ABHD8Q96I13 439 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 CGREF1Q99674 301 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 RBMX2Q9Y388 322 aaKnown RBP13.09□□□□□ -0.31
COL6A2-204ENST00000409416 SNX5Q9Y5X3 404 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 HCFC2Q9Y5Z7 792 aa13.09□□□□□ -0.31
COL6A2-204ENST00000409416 ZNF236Q9UL36 1845 aa13.08□□□□□ -0.32
COL6A2-204ENST00000409416 XYLBO75191 536 aa13.08□□□□□ -0.32
COL6A2-204ENST00000409416 MATN4O95460 622 aa13.08□□□□□ -0.32
COL6A2-204ENST00000409416 IGSF6O95976 241 aa13.08□□□□□ -0.32
COL6A2-204ENST00000409416 OCM2P0CE71 109 aa13.08□□□□□ -0.32
COL6A2-204ENST00000409416 OCMP0CE72 109 aaPredicted RBP13.08□□□□□ -0.32
COL6A2-204ENST00000409416 HSMCR30P0CW71 290 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms