RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 MAPRE2Q15555 327 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 DUSP7Q16829 419 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 DGUOKQ16854 277 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 ZNF181Q2M3W8 571 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 CEP78Q5JTW2 689 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 LRRC38Q5VT99 294 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 RSBN1Q5VWQ0 802 aaPredicted RBP5.37□□□□□ -1.55
CLK1-202ENST00000409403 ZNF544Q6NX49 715 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 ZNF773Q6PK81 442 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 XKRXQ6PP77 449 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 TRIM72Q6ZMU5 477 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 SH2D5Q6ZV89 423 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 ENOSF1Q7L5Y1 443 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 LIMS2Q7Z4I7 341 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 RHPN2Q8IUC4 686 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 HERC6Q8IVU3 1022 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 ADHFE1Q8IWW8 467 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 FAM109AQ8N4B1 249 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 TDRD5Q8NAT2 981 aaKnown RBP5.37□□□□□ -1.55
CLK1-202ENST00000409403 FBXO36Q8NEA4 188 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 ABHD11Q8NFV4 315 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 SLC20A1Q8WUM9 679 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 ARNTL2Q8WYA1 636 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 SERAC1Q96JX3 654 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 PRMT6Q96LA8 375 aaPredicted RBP5.37□□□□□ -1.55
CLK1-202ENST00000409403 VPS35Q96QK1 796 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 PSKH2Q96QS6 385 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 TWNKQ96RR1 684 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 UQCC2Q9BRT2 126 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 TMEM121Q9BTD3 319 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 C9orf16Q9BUW7 83 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 CNPPD1Q9BV87 410 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 HERC2P3Q9BVR0 1158 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 KRTAP4-11Q9BYQ6 195 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 REXO4Q9GZR2 422 aaKnown RBP5.37□□□□□ -1.55
CLK1-202ENST00000409403 COQ10BQ9H8M1 238 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 NANOGQ9H9S0 305 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 EFCAB1Q9HAE3 211 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 C12orf4Q9NQ89 552 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 SERHLQ9NQF3 203 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 FBXO8Q9NRD0 319 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 MAD2L2Q9UI95 211 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 MID2Q9UJV3 735 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 NOCTQ9UK39 431 aaKnown RBP5.37□□□□□ -1.55
CLK1-202ENST00000409403 UGT2A1Q9Y4X1 527 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 OTOGLQ3ZCN5 2332 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 A0A087WWL8 130 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 A0A1W2PPC4 97 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 TRIM49D1C9J1S8 452 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 E9PLN8 166 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 SLCO1B7G3V0H7 640 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 SGK1O00141 431 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 PAPSS1O43252 624 aaPredicted RBP5.37□□□□□ -1.55
CLK1-202ENST00000409403 TOM1L1O75674 476 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 SEC14L2O76054 403 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 PRSS23O95084 383 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 TRIM16O95361 564 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 PDGFBP01127 241 aaPredicted RBP5.37□□□□□ -1.55
CLK1-202ENST00000409403 APOA1P02647 267 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 ERBB2P04626 1255 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 CA3P07451 260 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 WEE2P0C1S8 567 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 TRAPPC2P0DI81 140 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 TRAPPC2BP0DI82 140 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 MBL2P11226 248 aaPredicted RBP5.37□□□□□ -1.55
CLK1-202ENST00000409403 CKBP12277 381 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 STMN1P16949 149 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 ZNF182P17025 639 aaPredicted RBP5.37□□□□□ -1.55
CLK1-202ENST00000409403 NAGAP17050 411 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 DDX5P17844 614 aaKnown RBP5.37□□□□□ -1.55
CLK1-202ENST00000409403 CCND2P30279 289 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 PPM1AP35813 382 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 OPRL1P41146 370 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 CASP3P42574 277 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 SLC1A6P48664 564 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 NUMBP49757 651 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 SLC26A2P50443 739 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 ATXN1P54253 815 aaKnown RBP5.37□□□□□ -1.55
CLK1-202ENST00000409403 UCP3P55916 312 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 DEFA1P59665 94 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 DEFA3P59666 94 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 COPZ1P61923 177 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 HTRA4P83105 476 aaPredicted RBP5.37□□□□□ -1.55
CLK1-202ENST00000409403 MPP1Q00013 466 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 PMS2P3Q13401 168 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 PMS2P11Q13670 270 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 ALCAMQ13740 583 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 GALNT3Q14435 633 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 CDK10Q15131 360 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 NPTX1Q15818 432 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 KCTD19Q17RG1 926 aaPredicted RBP5.37□□□□□ -1.55
CLK1-202ENST00000409403 TYSND1Q2T9J0 566 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 NHSL2Q5HYW2 709 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 NOMO2Q5JPE7 1267 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 CCNYL2Q5T2Q4 361 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 RBM20Q5T481 1227 aaKnown RBP5.37□□□□□ -1.55
CLK1-202ENST00000409403 ARHGEF16Q5VV41 709 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 NEK5Q6P3R8 708 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 MOXD1Q6UVY6 613 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 MAMDC4Q6UXC1 1216 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms