RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 CA5AP35218 305 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 ATP5C1P36542 298 aaKnown RBP8.15□□□□□ -1.1
SNX13-201ENST00000409076 CDH12P55289 794 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 COPZ1P61923 177 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 RPS26P62854 115 aaKnown RBP8.15□□□□□ -1.1
SNX13-201ENST00000409076 MAPRE1Q15691 268 aaKnown RBP8.15□□□□□ -1.1
SNX13-201ENST00000409076 CHRNA6Q15825 494 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 AFTPHQ6ULP2 937 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 TMC5Q6UXY8 1006 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 NCCRP1Q6ZVX7 275 aaPredicted RBP8.15□□□□□ -1.1
SNX13-201ENST00000409076 BHLHA9Q7RTU4 235 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 CYP4Z1Q86W10 505 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 AQP12AQ8IXF9 295 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 HM13Q8TCT9 377 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 SCAMP4Q969E2 229 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 SH3KBP1Q96B97 665 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 ART5Q96L15 291 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 UBXN10Q96LJ8 280 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 ZIC5Q96T25 663 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 COPS8Q99627 209 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 UGT2B28Q9BY64 529 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 SMOC2Q9H3U7 446 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 ERVK13-1Q9NX77 482 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 RANBP2P49792 3224 aaKnown RBP8.15□□□□□ -1.11
SNX13-201ENST00000409076 DLGAP1O14490 977 aa8.15□□□□□ -1.11
SNX13-201ENST00000409076 COQ9O75208 318 aa8.15□□□□□ -1.11
SNX13-201ENST00000409076 BMP2P12643 396 aa8.15□□□□□ -1.11
SNX13-201ENST00000409076 EPB42P16452 691 aa8.15□□□□□ -1.11
SNX13-201ENST00000409076 PRIM2P49643 509 aa8.15□□□□□ -1.11
SNX13-201ENST00000409076 NFKB2Q00653 900 aa8.15□□□□□ -1.11
SNX13-201ENST00000409076 TMEM53Q6P2H8 277 aa8.15□□□□□ -1.11
SNX13-201ENST00000409076 CEP68Q76N32 757 aa8.15□□□□□ -1.11
SNX13-201ENST00000409076 SPARTQ8N0X7 666 aa8.15□□□□□ -1.11
SNX13-201ENST00000409076 TTC29Q8NA56 475 aaPredicted RBP8.15□□□□□ -1.11
SNX13-201ENST00000409076 FAM83FQ8NEG4 500 aaPredicted RBP8.15□□□□□ -1.11
SNX13-201ENST00000409076 FAM126AQ9BYI3 521 aaPredicted RBP8.15□□□□□ -1.11
SNX13-201ENST00000409076 SLC2A11Q9BYW1 496 aa8.15□□□□□ -1.11
SNX13-201ENST00000409076 AMBRA1Q9C0C7 1298 aa8.15□□□□□ -1.11
SNX13-201ENST00000409076 FAIMQ9NVQ4 179 aa8.15□□□□□ -1.11
SNX13-201ENST00000409076 C5AR2Q9P296 337 aa8.15□□□□□ -1.11
SNX13-201ENST00000409076 PSME2Q9UL46 239 aa8.15□□□□□ -1.11
SNX13-201ENST00000409076 DUSP12Q9UNI6 340 aa8.15□□□□□ -1.11
SNX13-201ENST00000409076 PCDHGA11Q9Y5H2 935 aa8.15□□□□□ -1.11
SNX13-201ENST00000409076 CLDN25C9JDP6 229 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 PRMT5O14744 637 aaPredicted RBP8.14□□□□□ -1.11
SNX13-201ENST00000409076 RGS14O43566 566 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 NDUFB5O43674 189 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 CREG1O75629 220 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 GSTT2P0CG29 244 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 GSTT2BP0CG30 244 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 RAP2AP10114 183 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 MAGEA8P43361 318 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 PREPP48147 710 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 TGM4P49221 684 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 ALDH3A2P51648 485 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 DNAJB13P59910 316 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 SPIBQ01892 262 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 IRF8Q02556 426 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 SERINC3Q13530 473 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 RFTN1Q14699 578 aaPredicted RBP8.14□□□□□ -1.11
SNX13-201ENST00000409076 USP41Q3LFD5 358 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 C1QTNF12Q5T7M4 302 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 TTC23Q5W5X9 447 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 NADSYN1Q6IA69 706 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 KIAA0408Q6ZU52 694 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 P2RY8Q86VZ1 359 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 NKAPQ8N5F7 415 aaKnown RBP8.14□□□□□ -1.11
SNX13-201ENST00000409076 CAMKK1Q8N5S9 505 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 KIAA1191Q96A73 305 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 ZNF385DQ9H6B1 395 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 HMG20AQ9NP66 347 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 SDR39U1Q9NRG7 319 aaPredicted RBP8.14□□□□□ -1.11
SNX13-201ENST00000409076 INIPQ9NRY2 104 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 CXXC1Q9P0U4 656 aaPredicted RBP8.14□□□□□ -1.11
SNX13-201ENST00000409076 RAB23Q9ULC3 237 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 PCDHB14Q9Y5E9 798 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 MIA3Q5JRA6 1907 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 MYOFQ9NZM1 2061 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 TYW5A2RUC4 315 aaKnown RBP8.14□□□□□ -1.11
SNX13-201ENST00000409076 TAF4O00268 1085 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 SLC1A7O00341 560 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 KPNA4O00629 521 aaPredicted RBP8.14□□□□□ -1.11
SNX13-201ENST00000409076 SNPHO15079 494 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 PAPSS2O95340 614 aaPredicted RBP8.14□□□□□ -1.11
SNX13-201ENST00000409076 AKR1A1P14550 325 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 HLA-DPA1P20036 260 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 S100A5P33763 92 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 GNPDA1P46926 289 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 ALDH3B2P48448 385 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 RPIAP49247 311 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 ST13P50502 369 aaKnown RBP8.14□□□□□ -1.11
SNX13-201ENST00000409076 SCAPQ12770 1279 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 TRAF3Q13114 568 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 PON2Q15165 354 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 XKR6Q5GH73 641 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 RTP2Q5QGT7 225 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 ZNF697Q5TEC3 545 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 MFSD4BQ5TF39 518 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 KANK2Q63ZY3 851 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 ZNF773Q6PK81 442 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms