RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 RAB7BQ96AH8 199 aa24.04■■□□□ 1.44
DNMT3A-206ENST00000406659 MAGEB10Q96LZ2 347 aaPredicted RBP24.04■■□□□ 1.44
DNMT3A-206ENST00000406659 CCDC138Q96M89 665 aa24.04■■□□□ 1.44
DNMT3A-206ENST00000406659 ELOVL6Q9H5J4 265 aa24.04■■□□□ 1.44
DNMT3A-206ENST00000406659 C1orf109Q9NX04 203 aa24.04■■□□□ 1.44
DNMT3A-206ENST00000406659 CMTM6Q9NX76 183 aa24.04■■□□□ 1.44
DNMT3A-206ENST00000406659 NPPAP01160 153 aa24.03■■□□□ 1.44
DNMT3A-206ENST00000406659 PDYNP01213 254 aa24.03■■□□□ 1.44
DNMT3A-206ENST00000406659 APODP05090 189 aa24.03■■□□□ 1.44
DNMT3A-206ENST00000406659 C8BP07358 591 aa24.03■■□□□ 1.44
DNMT3A-206ENST00000406659 JAK1P23458 1154 aa24.03■■□□□ 1.44
DNMT3A-206ENST00000406659 PEX2P28328 305 aa24.03■■□□□ 1.44
DNMT3A-206ENST00000406659 GDI1P31150 447 aa24.03■■□□□ 1.44
DNMT3A-206ENST00000406659 GTF2H3Q13889 308 aa24.03■■□□□ 1.44
DNMT3A-206ENST00000406659 C6orf10Q5SRN2 563 aa24.03■■□□□ 1.44
DNMT3A-206ENST00000406659 SLC22A15Q8IZD6 547 aa24.03■■□□□ 1.44
DNMT3A-206ENST00000406659 HCN2Q9UL51 889 aa24.03■■□□□ 1.44
DNMT3A-206ENST00000406659 LRRK1Q38SD2 2015 aa24.03■■□□□ 1.44
DNMT3A-206ENST00000406659 COL4A3Q01955 1670 aa24.03■■□□□ 1.44
DNMT3A-206ENST00000406659 KCNE1BA0A087WTH5 132 aa24.03■■□□□ 1.44
DNMT3A-206ENST00000406659 ANTXRLA6NF34 631 aa24.03■■□□□ 1.44
DNMT3A-206ENST00000406659 GRXCR2A6NFK2 248 aa24.03■■□□□ 1.44
DNMT3A-206ENST00000406659 ANKRD28O15084 1053 aa24.03■■□□□ 1.44
DNMT3A-206ENST00000406659 DNAJA2O60884 412 aa24.03■■□□□ 1.44
DNMT3A-206ENST00000406659 HSD17B1P14061 328 aa24.03■■□□□ 1.44
DNMT3A-206ENST00000406659 HALP42357 657 aa24.03■■□□□ 1.44
DNMT3A-206ENST00000406659 PFN3P60673 137 aa24.03■■□□□ 1.44
DNMT3A-206ENST00000406659 CNTN1Q12860 1018 aa24.03■■□□□ 1.44
DNMT3A-206ENST00000406659 ADGRE1Q14246 886 aa24.03■■□□□ 1.44
DNMT3A-206ENST00000406659 EEF1AKMT2Q5JPI9 291 aaKnown RBP24.03■■□□□ 1.44
DNMT3A-206ENST00000406659 TRAPPC5Q8IUR0 188 aa24.03■■□□□ 1.44
DNMT3A-206ENST00000406659 DNAJB14Q8TBM8 379 aa24.03■■□□□ 1.44
DNMT3A-206ENST00000406659 ELSPBP1Q96BH3 223 aa24.03■■□□□ 1.44
DNMT3A-206ENST00000406659 ACTL8Q9H568 366 aa24.03■■□□□ 1.44
DNMT3A-206ENST00000406659 COPS7BQ9H9Q2 264 aaPredicted RBP24.03■■□□□ 1.44
DNMT3A-206ENST00000406659 TRIM39Q9HCM9 518 aa24.03■■□□□ 1.44
DNMT3A-206ENST00000406659 PCDHA9Q9Y5H5 950 aa24.03■■□□□ 1.44
DNMT3A-206ENST00000406659 PRSS51A0A1B0GVH4 220 aa24.02■■□□□ 1.44
DNMT3A-206ENST00000406659 H3BM21 787 aa24.02■■□□□ 1.44
DNMT3A-206ENST00000406659 PEX1O43933 1283 aa24.02■■□□□ 1.44
DNMT3A-206ENST00000406659 CLNS1AP54105 237 aaKnown RBP24.02■■□□□ 1.44
DNMT3A-206ENST00000406659 RHDQ02161 417 aa24.02■■□□□ 1.44
DNMT3A-206ENST00000406659 BNIP2Q12982 314 aa24.02■■□□□ 1.44
DNMT3A-206ENST00000406659 ITPRIPL2Q3MIP1 535 aa24.02■■□□□ 1.44
DNMT3A-206ENST00000406659 CYP2R1Q6VVX0 501 aa24.02■■□□□ 1.44
DNMT3A-206ENST00000406659 PLCD3Q8N3E9 789 aa24.02■■□□□ 1.44
DNMT3A-206ENST00000406659 LIX1Q8N485 282 aa24.02■■□□□ 1.44
DNMT3A-206ENST00000406659 TMEM125Q96AQ2 219 aa24.02■■□□□ 1.44
DNMT3A-206ENST00000406659 CHFRQ96EP1 664 aa24.02■■□□□ 1.44
DNMT3A-206ENST00000406659 ASIC5Q9NY37 505 aa24.02■■□□□ 1.44
DNMT3A-206ENST00000406659 GMPR2Q9P2T1 348 aaKnown RBP24.02■■□□□ 1.44
DNMT3A-206ENST00000406659 FADS3Q9Y5Q0 445 aa24.02■■□□□ 1.44
DNMT3A-206ENST00000406659 LIN7AO14910 233 aaPredicted RBP24.01■■□□□ 1.43
DNMT3A-206ENST00000406659 VARSP26640 1264 aaKnown RBP24.01■■□□□ 1.43
DNMT3A-206ENST00000406659 PDHA2P29803 388 aa24.01■■□□□ 1.43
DNMT3A-206ENST00000406659 BDKRB1P46663 353 aa24.01■■□□□ 1.43
DNMT3A-206ENST00000406659 CHIT1Q13231 466 aa24.01■■□□□ 1.43
DNMT3A-206ENST00000406659 GRAMD1BQ3KR37 738 aa24.01■■□□□ 1.43
DNMT3A-206ENST00000406659 OGFRL1Q5TC84 451 aaPredicted RBP24.01■■□□□ 1.43
DNMT3A-206ENST00000406659 CES5AQ6NT32 575 aa24.01■■□□□ 1.43
DNMT3A-206ENST00000406659 SLC2A7Q6PXP3 512 aa24.01■■□□□ 1.43
DNMT3A-206ENST00000406659 PARM1Q6UWI2 310 aa24.01■■□□□ 1.43
DNMT3A-206ENST00000406659 THOC6Q86W42 341 aaKnown RBP24.01■■□□□ 1.43
DNMT3A-206ENST00000406659 PDSS2Q86YH6 399 aa24.01■■□□□ 1.43
DNMT3A-206ENST00000406659 GALNT13Q8IUC8 556 aa24.01■■□□□ 1.43
DNMT3A-206ENST00000406659 TMEM126BQ8IUX1 230 aa24.01■■□□□ 1.43
DNMT3A-206ENST00000406659 CFAP206Q8IYR0 622 aa24.01■■□□□ 1.43
DNMT3A-206ENST00000406659 DPP10Q8N608 796 aa24.01■■□□□ 1.43
DNMT3A-206ENST00000406659 ZUFSPQ96AP4 578 aa24.01■■□□□ 1.43
DNMT3A-206ENST00000406659 ACPTQ9BZG2 426 aa24.01■■□□□ 1.43
DNMT3A-206ENST00000406659 DPY30Q9C005 99 aa24.01■■□□□ 1.43
DNMT3A-206ENST00000406659 TRIM15Q9C019 465 aa24.01■■□□□ 1.43
DNMT3A-206ENST00000406659 AP4S1Q9Y587 144 aa24.01■■□□□ 1.43
DNMT3A-206ENST00000406659 STON1Q9Y6Q2 735 aa24.01■■□□□ 1.43
DNMT3A-206ENST00000406659 TCRBV3S1A0A5B6 114 aa24.01■■□□□ 1.43
DNMT3A-206ENST00000406659 ARNTLO00327 626 aa24.01■■□□□ 1.43
DNMT3A-206ENST00000406659 SLC44A4Q53GD3 710 aa24.01■■□□□ 1.43
DNMT3A-206ENST00000406659 AGTRAPQ6RW13 159 aa24.01■■□□□ 1.43
DNMT3A-206ENST00000406659 FOXJ1Q92949 421 aa24.01■■□□□ 1.43
DNMT3A-206ENST00000406659 ZNF514Q96K75 400 aaPredicted RBP24.01■■□□□ 1.43
DNMT3A-206ENST00000406659 STOX2Q9P2F5 926 aaPredicted RBP24.01■■□□□ 1.43
DNMT3A-206ENST00000406659 ATXN10Q9UBB4 475 aa24.01■■□□□ 1.43
DNMT3A-206ENST00000406659 ZFC3H1O60293 1989 aaKnown RBP24■■□□□ 1.43
DNMT3A-206ENST00000406659 LILRB5O75023 590 aa24■■□□□ 1.43
DNMT3A-206ENST00000406659 RSL1D1O76021 490 aaKnown RBP24■■□□□ 1.43
DNMT3A-206ENST00000406659 LAMP2P13473 410 aa24■■□□□ 1.43
DNMT3A-206ENST00000406659 WASP42768 502 aa24■■□□□ 1.43
DNMT3A-206ENST00000406659 NEK2P51955 445 aa24■■□□□ 1.43
DNMT3A-206ENST00000406659 DGKQP52824 942 aa24■■□□□ 1.43
DNMT3A-206ENST00000406659 IRF8Q02556 426 aa24■■□□□ 1.43
DNMT3A-206ENST00000406659 NAE1Q13564 534 aa24■■□□□ 1.43
DNMT3A-206ENST00000406659 SFT2D3Q587I9 215 aa24■■□□□ 1.43
DNMT3A-206ENST00000406659 MED8Q96G25 268 aa24■■□□□ 1.43
DNMT3A-206ENST00000406659 PKP4Q99569 1192 aa24■■□□□ 1.43
DNMT3A-206ENST00000406659 TRMT61BQ9BVS5 477 aaKnown RBP24■■□□□ 1.43
DNMT3A-206ENST00000406659 RIMS3Q9UJD0 308 aa24■■□□□ 1.43
DNMT3A-206ENST00000406659 DOCK8Q8NF50 2099 aa24■■□□□ 1.43
DNMT3A-206ENST00000406659 C15orf38-AP3S2A0A0A6YYH1 394 aa23.99■■□□□ 1.43
DNMT3A-206ENST00000406659 CLGNO14967 610 aa23.99■■□□□ 1.43
DNMT3A-206ENST00000406659 JUPP14923 745 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms