RNA–Protein interactions for RNA: ENST00000404744.1

CDPF1-204, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3 BASIC

Gene CDPF1, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-204ENST00000404744 PRPF4O43172 522 aaKnown RBP eCLIP15.3■□□□□ 0.04
CDPF1-204ENST00000404744 NUDT21O43809 227 aaKnown RBP15.3■□□□□ 0.04
CDPF1-204ENST00000404744 TYROBPO43914 113 aa15.3■□□□□ 0.04
CDPF1-204ENST00000404744 GFAPP14136 432 aa15.3■□□□□ 0.04
CDPF1-204ENST00000404744 NCF1P14598 390 aaPredicted RBP15.3■□□□□ 0.04
CDPF1-204ENST00000404744 HPDP32754 393 aaPredicted RBP15.3■□□□□ 0.04
CDPF1-204ENST00000404744 HSD17B2P37059 387 aa15.3■□□□□ 0.04
CDPF1-204ENST00000404744 CDKL1Q00532 357 aa15.3■□□□□ 0.04
CDPF1-204ENST00000404744 GPR18Q14330 331 aa15.3■□□□□ 0.04
CDPF1-204ENST00000404744 PPP1R3AQ16821 1122 aa15.3■□□□□ 0.04
CDPF1-204ENST00000404744 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.3■□□□□ 0.04
CDPF1-204ENST00000404744 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.3■□□□□ 0.04
CDPF1-204ENST00000404744 STPG1Q5TH74 334 aa15.3■□□□□ 0.04
CDPF1-204ENST00000404744 TMEM26Q6ZUK4 368 aa15.3■□□□□ 0.04
CDPF1-204ENST00000404744 OR52E1Q8NGJ3 308 aa15.3■□□□□ 0.04
CDPF1-204ENST00000404744 LCN9Q8WX39 176 aa15.3■□□□□ 0.04
CDPF1-204ENST00000404744 ATOH8Q96SQ7 321 aa15.3■□□□□ 0.04
CDPF1-204ENST00000404744 NKIRAS1Q9NYS0 192 aa15.3■□□□□ 0.04
CDPF1-204ENST00000404744 NUDT4Q9NZJ9 180 aa15.3■□□□□ 0.04
CDPF1-204ENST00000404744 SPATA7Q9P0W8 599 aa15.3■□□□□ 0.04
CDPF1-204ENST00000404744 FTSJ1Q9UET6 329 aa15.3■□□□□ 0.04
CDPF1-204ENST00000404744 TMCO1Q9UM00 188 aa15.3■□□□□ 0.04
CDPF1-204ENST00000404744 PLAGL1Q9UM63 463 aa15.3■□□□□ 0.04
CDPF1-204ENST00000404744 BTBD3Q9Y2F9 522 aa15.3■□□□□ 0.04
CDPF1-204ENST00000404744 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.29■□□□□ 0.04
CDPF1-204ENST00000404744 CPED1A4D0V7 1026 aa15.29■□□□□ 0.04
CDPF1-204ENST00000404744 UBXN8O00124 270 aa15.29■□□□□ 0.04
CDPF1-204ENST00000404744 TK2O00142 265 aa15.29■□□□□ 0.04
CDPF1-204ENST00000404744 MYO1CO00159 1063 aa15.29■□□□□ 0.04
CDPF1-204ENST00000404744 PPM1DO15297 605 aa15.29■□□□□ 0.04
CDPF1-204ENST00000404744 TM9SF1O15321 606 aa15.29■□□□□ 0.04
CDPF1-204ENST00000404744 SH3BP5O60239 455 aa15.29■□□□□ 0.04
CDPF1-204ENST00000404744 GDF9O60383 454 aa15.29■□□□□ 0.04
CDPF1-204ENST00000404744 GFRA3O60609 400 aa15.29■□□□□ 0.04
CDPF1-204ENST00000404744 ZWINTO95229 277 aa15.29■□□□□ 0.04
CDPF1-204ENST00000404744 CD59P13987 128 aa15.29■□□□□ 0.04
CDPF1-204ENST00000404744 SHMT2P34897 504 aa15.29■□□□□ 0.04
CDPF1-204ENST00000404744 RPA3P35244 121 aaPredicted RBP15.29■□□□□ 0.04
CDPF1-204ENST00000404744 KCNC1P48547 511 aa15.29■□□□□ 0.04
CDPF1-204ENST00000404744 CCSMST1Q4G0I0 132 aa15.29■□□□□ 0.04
CDPF1-204ENST00000404744 RASGRP3Q8IV61 690 aa15.29■□□□□ 0.04
CDPF1-204ENST00000404744 NAXDQ8IW45 347 aa15.29■□□□□ 0.04
CDPF1-204ENST00000404744 TCAIMQ8N3R3 496 aa15.29■□□□□ 0.04
CDPF1-204ENST00000404744 FBXO39Q8N4B4 442 aa15.29■□□□□ 0.04
CDPF1-204ENST00000404744 ANKRD42Q8N9B4 389 aa15.29■□□□□ 0.04
CDPF1-204ENST00000404744 ARMC2Q8NEN0 867 aa15.29■□□□□ 0.04
CDPF1-204ENST00000404744 NAT6Q93015 286 aa15.29■□□□□ 0.04
CDPF1-204ENST00000404744 CNDP2Q96KP4 475 aaKnown RBP15.29■□□□□ 0.04
CDPF1-204ENST00000404744 FAM111AQ96PZ2 611 aa15.29■□□□□ 0.04
CDPF1-204ENST00000404744 SRMSQ9H3Y6 488 aa15.29■□□□□ 0.04
CDPF1-204ENST00000404744 UCK1Q9HA47 277 aa15.29■□□□□ 0.04
CDPF1-204ENST00000404744 RNF215Q9Y6U7 377 aa15.29■□□□□ 0.04
CDPF1-204ENST00000404744 ZFHX2Q9C0A1 2572 aaPredicted RBP15.28■□□□□ 0.04
CDPF1-204ENST00000404744 TMEM120BA0PK00 339 aa15.28■□□□□ 0.04
CDPF1-204ENST00000404744 PLIN3O60664 434 aa15.28■□□□□ 0.04
CDPF1-204ENST00000404744 PROCP04070 461 aa15.28■□□□□ 0.04
CDPF1-204ENST00000404744 MYL2P10916 166 aa15.28■□□□□ 0.04
CDPF1-204ENST00000404744 MYF5P13349 255 aa15.28■□□□□ 0.04
CDPF1-204ENST00000404744 AMD1P17707 334 aa15.28■□□□□ 0.04
CDPF1-204ENST00000404744 ALDH4A1P30038 563 aa15.28■□□□□ 0.04
CDPF1-204ENST00000404744 HNMTP50135 292 aa15.28■□□□□ 0.04
CDPF1-204ENST00000404744 RAB28P51157 221 aa15.28■□□□□ 0.04
CDPF1-204ENST00000404744 ARHGAP19Q14CB8 494 aa15.28■□□□□ 0.04
CDPF1-204ENST00000404744 CDKL4Q5MAI5 379 aa15.28■□□□□ 0.04
CDPF1-204ENST00000404744 SULT1C3Q6IMI6 304 aa15.28■□□□□ 0.04
CDPF1-204ENST00000404744 KLHL35Q6PF15 583 aa15.28■□□□□ 0.04
CDPF1-204ENST00000404744 RAB44Q7Z6P3 723 aaPredicted RBP15.28■□□□□ 0.04
CDPF1-204ENST00000404744 AMIGO1Q86WK6 493 aa15.28■□□□□ 0.04
CDPF1-204ENST00000404744 ZNF761Q86XN6 746 aaPredicted RBP15.28■□□□□ 0.04
CDPF1-204ENST00000404744 SYTL1Q8IYJ3 562 aa15.28■□□□□ 0.04
CDPF1-204ENST00000404744 OR4E2Q8NGC2 313 aa15.28■□□□□ 0.04
CDPF1-204ENST00000404744 RDH11Q8TC12 318 aa15.28■□□□□ 0.04
CDPF1-204ENST00000404744 SREK1Q8WXA9 508 aaKnown RBP15.28■□□□□ 0.04
CDPF1-204ENST00000404744 JPH3Q8WXH2 748 aaPredicted RBP15.28■□□□□ 0.04
CDPF1-204ENST00000404744 AHCYL2Q96HN2 611 aaKnown RBP15.28■□□□□ 0.04
CDPF1-204ENST00000404744 C12orf65Q9H3J6 166 aaKnown RBP15.28■□□□□ 0.04
CDPF1-204ENST00000404744 XKR8Q9H6D3 395 aa15.28■□□□□ 0.04
CDPF1-204ENST00000404744 KCNK4Q9NYG8 393 aa15.28■□□□□ 0.04
CDPF1-204ENST00000404744 WWOXQ9NZC7 414 aa15.28■□□□□ 0.04
CDPF1-204ENST00000404744 SLC17A7Q9P2U7 560 aa15.28■□□□□ 0.04
CDPF1-204ENST00000404744 EMCNQ9ULC0 261 aa15.28■□□□□ 0.04
CDPF1-204ENST00000404744 DMDP11532 3685 aa15.28■□□□□ 0.04
CDPF1-204ENST00000404744 EME2A4GXA9 379 aaPredicted RBP15.27■□□□□ 0.04
CDPF1-204ENST00000404744 SLC16A8O95907 504 aa15.27■□□□□ 0.04
CDPF1-204ENST00000404744 CKMT1AP12532 417 aa15.27■□□□□ 0.04
CDPF1-204ENST00000404744 CPA3P15088 417 aa15.27■□□□□ 0.04
CDPF1-204ENST00000404744 GPR3P46089 330 aa15.27■□□□□ 0.04
CDPF1-204ENST00000404744 PNLIPRP1P54315 467 aa15.27■□□□□ 0.04
CDPF1-204ENST00000404744 TSTA3Q13630 321 aaPredicted RBP15.27■□□□□ 0.04
CDPF1-204ENST00000404744 PFKFB4Q16877 469 aa15.27■□□□□ 0.04
CDPF1-204ENST00000404744 PROX2Q3B8N5 592 aa15.27■□□□□ 0.04
CDPF1-204ENST00000404744 ANKS6Q68DC2 871 aa15.27■□□□□ 0.04
CDPF1-204ENST00000404744 ARMC6Q6NXE6 501 aa15.27■□□□□ 0.04
CDPF1-204ENST00000404744 AGTRAPQ6RW13 159 aa15.27■□□□□ 0.04
CDPF1-204ENST00000404744 FBXL8Q96CD0 374 aa15.27■□□□□ 0.04
CDPF1-204ENST00000404744 CCDC126Q96EE4 140 aa15.27■□□□□ 0.04
CDPF1-204ENST00000404744 IL17FQ96PD4 163 aa15.27■□□□□ 0.04
CDPF1-204ENST00000404744 CDC6Q99741 560 aa15.27■□□□□ 0.04
CDPF1-204ENST00000404744 PAIP2Q9BPZ3 127 aaKnown RBP15.27■□□□□ 0.04
CDPF1-204ENST00000404744 ZMYND15Q9H091 742 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms