RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 KIAA0895LQ68EN5 471 aa20.46■□□□□ 0.87
TPM1-208ENST00000404484 GALNT13Q8IUC8 556 aa20.46■□□□□ 0.87
TPM1-208ENST00000404484 ATP6V1E2Q96A05 226 aa20.46■□□□□ 0.87
TPM1-208ENST00000404484 ESAMQ96AP7 390 aa20.46■□□□□ 0.87
TPM1-208ENST00000404484 NMUR2Q9GZQ4 415 aa20.46■□□□□ 0.87
TPM1-208ENST00000404484 SLC32A1Q9H598 525 aa20.46■□□□□ 0.87
TPM1-208ENST00000404484 NOL11Q9H8H0 719 aaKnown RBP20.46■□□□□ 0.87
TPM1-208ENST00000404484 MEAF6Q9HAF1 191 aa20.46■□□□□ 0.87
TPM1-208ENST00000404484 PARD6AQ9NPB6 346 aa20.46■□□□□ 0.87
TPM1-208ENST00000404484 TXLNGQ9NUQ3 528 aa20.46■□□□□ 0.87
TPM1-208ENST00000404484 C10orf142B7Z368 130 aa20.46■□□□□ 0.87
TPM1-208ENST00000404484 EPN2O95208 641 aa20.46■□□□□ 0.87
TPM1-208ENST00000404484 RPN2P04844 631 aa20.46■□□□□ 0.87
TPM1-208ENST00000404484 CEACAM5P06731 702 aa20.46■□□□□ 0.87
TPM1-208ENST00000404484 UROSP10746 265 aa20.46■□□□□ 0.87
TPM1-208ENST00000404484 EPB42P16452 691 aa20.46■□□□□ 0.87
TPM1-208ENST00000404484 HTR1BP28222 390 aa20.46■□□□□ 0.87
TPM1-208ENST00000404484 CD6P30203 668 aa20.46■□□□□ 0.87
TPM1-208ENST00000404484 CCNG1P51959 295 aa20.46■□□□□ 0.87
TPM1-208ENST00000404484 YPEL5P62699 121 aa20.46■□□□□ 0.87
TPM1-208ENST00000404484 BTKQ06187 659 aa20.46■□□□□ 0.87
TPM1-208ENST00000404484 BNIP1Q12981 228 aa20.46■□□□□ 0.87
TPM1-208ENST00000404484 NFATC4Q14934 902 aa20.46■□□□□ 0.87
TPM1-208ENST00000404484 KRT72Q14CN4 511 aa20.46■□□□□ 0.87
TPM1-208ENST00000404484 METRNLQ641Q3 311 aa20.46■□□□□ 0.87
TPM1-208ENST00000404484 MBOAT1Q6ZNC8 495 aa20.46■□□□□ 0.87
TPM1-208ENST00000404484 LPCAT2Q7L5N7 544 aa20.46■□□□□ 0.87
TPM1-208ENST00000404484 PDZD3Q86UT5 571 aa20.46■□□□□ 0.87
TPM1-208ENST00000404484 KIAA2013Q8IYS2 634 aa20.46■□□□□ 0.87
TPM1-208ENST00000404484 DEFB119Q8N690 84 aa20.46■□□□□ 0.87
TPM1-208ENST00000404484 ACTRT2Q8TDY3 377 aa20.46■□□□□ 0.87
TPM1-208ENST00000404484 TOE1Q96GM8 510 aaKnown RBP20.46■□□□□ 0.87
TPM1-208ENST00000404484 MAELQ96JY0 434 aaKnown RBP20.46■□□□□ 0.87
TPM1-208ENST00000404484 CCT7Q99832 543 aa20.46■□□□□ 0.87
TPM1-208ENST00000404484 MYOCQ99972 504 aa20.46■□□□□ 0.87
TPM1-208ENST00000404484 IPPKQ9H8X2 491 aa20.46■□□□□ 0.87
TPM1-208ENST00000404484 TNFRSF12AQ9NP84 129 aa20.46■□□□□ 0.87
TPM1-208ENST00000404484 ASB1Q9Y576 335 aa20.46■□□□□ 0.87
TPM1-208ENST00000404484 HS3ST3A1Q9Y663 406 aa20.46■□□□□ 0.87
TPM1-208ENST00000404484 CEP250Q9BV73 2442 aa20.45■□□□□ 0.86
TPM1-208ENST00000404484 DOCK9Q9BZ29 2069 aa20.45■□□□□ 0.86
TPM1-208ENST00000404484 SKAP2O75563 359 aaPredicted RBP20.45■□□□□ 0.86
TPM1-208ENST00000404484 ENO1P06733 434 aaKnown RBP20.45■□□□□ 0.86
TPM1-208ENST00000404484 SLC6A12P48065 614 aa20.45■□□□□ 0.86
TPM1-208ENST00000404484 DHPSP49366 369 aaPredicted RBP20.45■□□□□ 0.86
TPM1-208ENST00000404484 CCDC6Q16204 474 aa20.45■□□□□ 0.86
TPM1-208ENST00000404484 C18orf21Q32NC0 220 aaPredicted RBP20.45■□□□□ 0.86
TPM1-208ENST00000404484 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.45■□□□□ 0.86
TPM1-208ENST00000404484 CLEC6AQ6EIG7 209 aa20.45■□□□□ 0.86
TPM1-208ENST00000404484 SLC36A4Q6YBV0 504 aa20.45■□□□□ 0.86
TPM1-208ENST00000404484 SYVN1Q86TM6 617 aa20.45■□□□□ 0.86
TPM1-208ENST00000404484 CEP70Q8NHQ1 597 aa20.45■□□□□ 0.86
TPM1-208ENST00000404484 SCARF2Q96GP6 870 aaPredicted RBP20.45■□□□□ 0.86
TPM1-208ENST00000404484 OR52A5Q9H2C5 316 aa20.45■□□□□ 0.86
TPM1-208ENST00000404484 WSB2Q9NYS7 404 aaPredicted RBP20.45■□□□□ 0.86
TPM1-208ENST00000404484 SLC12A4Q9UP95 1085 aa20.45■□□□□ 0.86
TPM1-208ENST00000404484 PRKAB1Q9Y478 270 aa20.45■□□□□ 0.86
TPM1-208ENST00000404484 DMXL1Q9Y485 3027 aa20.45■□□□□ 0.86
TPM1-208ENST00000404484 LAMA1P25391 3075 aa20.44■□□□□ 0.86
TPM1-208ENST00000404484 RALGAPA1Q6GYQ0 2036 aa20.44■□□□□ 0.86
TPM1-208ENST00000404484 GOLGA8QA0A0J9YX86 632 aa20.44■□□□□ 0.86
TPM1-208ENST00000404484 GOLGA8OA6NCC3 632 aa20.44■□□□□ 0.86
TPM1-208ENST00000404484 GOLGA8NF8WBI6 632 aa20.44■□□□□ 0.86
TPM1-208ENST00000404484 PRAMEF26H0Y7S4 382 aa20.44■□□□□ 0.86
TPM1-208ENST00000404484 IFRD1O00458 451 aaPredicted RBP20.44■□□□□ 0.86
TPM1-208ENST00000404484 PPP6CO00743 305 aa20.44■□□□□ 0.86
TPM1-208ENST00000404484 SDHDO14521 159 aa20.44■□□□□ 0.86
TPM1-208ENST00000404484 HNRNPCL1O60812 293 aaKnown RBP20.44■□□□□ 0.86
TPM1-208ENST00000404484 C1orf105O95561 183 aa20.44■□□□□ 0.86
TPM1-208ENST00000404484 ACADLP28330 430 aa20.44■□□□□ 0.86
TPM1-208ENST00000404484 EPHA3P29320 983 aa20.44■□□□□ 0.86
TPM1-208ENST00000404484 ARL1P40616 181 aaPredicted RBP20.44■□□□□ 0.86
TPM1-208ENST00000404484 RPL6Q02878 288 aaKnown RBP20.44■□□□□ 0.86
TPM1-208ENST00000404484 XKR5Q6UX68 686 aa20.44■□□□□ 0.86
TPM1-208ENST00000404484 TWIST2Q8WVJ9 160 aa20.44■□□□□ 0.86
TPM1-208ENST00000404484 C19orf60Q96EN9 201 aa20.44■□□□□ 0.86
TPM1-208ENST00000404484 MAGEB10Q96LZ2 347 aaPredicted RBP20.44■□□□□ 0.86
TPM1-208ENST00000404484 WDR92Q96MX6 357 aa20.44■□□□□ 0.86
TPM1-208ENST00000404484 OR52B2Q96RD2 323 aa20.44■□□□□ 0.86
TPM1-208ENST00000404484 WDR55Q9H6Y2 383 aaPredicted RBP20.44■□□□□ 0.86
TPM1-208ENST00000404484 PCYT1BQ9Y5K3 369 aaPredicted RBP20.44■□□□□ 0.86
TPM1-208ENST00000404484 PLXND1Q9Y4D7 1925 aa20.44■□□□□ 0.86
TPM1-208ENST00000404484 POM121BA6NF01 834 aa20.43■□□□□ 0.86
TPM1-208ENST00000404484 VPS4BO75351 444 aa20.43■□□□□ 0.86
TPM1-208ENST00000404484 SLC35G4P0C7Q5 338 aa20.43■□□□□ 0.86
TPM1-208ENST00000404484 PFN3P60673 137 aa20.43■□□□□ 0.86
TPM1-208ENST00000404484 LSM12Q3MHD2 195 aaKnown RBP20.43■□□□□ 0.86
TPM1-208ENST00000404484 UGT3A2Q3SY77 523 aa20.43■□□□□ 0.86
TPM1-208ENST00000404484 PYCR3Q53H96 274 aa20.43■□□□□ 0.86
TPM1-208ENST00000404484 NXNQ6DKJ4 435 aa20.43■□□□□ 0.86
TPM1-208ENST00000404484 FAM83HQ6ZRV2 1179 aaPredicted RBP20.43■□□□□ 0.86
TPM1-208ENST00000404484 ARMCX6Q7L4S7 300 aa20.43■□□□□ 0.86
TPM1-208ENST00000404484 KLHDC8AQ8IYD2 350 aa20.43■□□□□ 0.86
TPM1-208ENST00000404484 NTMT1Q9BV86 223 aa20.43■□□□□ 0.86
TPM1-208ENST00000404484 C6orf106Q9H6K1 298 aaPredicted RBP20.43■□□□□ 0.86
TPM1-208ENST00000404484 SEMA4GQ9NTN9 838 aa20.43■□□□□ 0.86
TPM1-208ENST00000404484 DNAJC11Q9NVH1 559 aa20.43■□□□□ 0.86
TPM1-208ENST00000404484 SLC23A2Q9UGH3 650 aa20.43■□□□□ 0.86
TPM1-208ENST00000404484 MOSPD1Q9UJG1 213 aa20.43■□□□□ 0.86
TPM1-208ENST00000404484 PCDHGA5Q9Y5G8 931 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms