RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 TBX4P57082 545 aa13.69□□□□□ -0.22
APOB-202ENST00000399256 PRAMEF19Q5SWL8 479 aa13.69□□□□□ -0.22
APOB-202ENST00000399256 CAPN13Q6MZZ7 669 aaPredicted RBP13.69□□□□□ -0.22
APOB-202ENST00000399256 AFTPHQ6ULP2 937 aa13.69□□□□□ -0.22
APOB-202ENST00000399256 SPATC1Q76KD6 591 aa13.69□□□□□ -0.22
APOB-202ENST00000399256 GLT6D1Q7Z4J2 308 aa13.69□□□□□ -0.22
APOB-202ENST00000399256 MILR1Q7Z6M3 343 aa13.69□□□□□ -0.22
APOB-202ENST00000399256 CCDC103Q8IW40 242 aa13.69□□□□□ -0.22
APOB-202ENST00000399256 PEX13Q92968 403 aa13.69□□□□□ -0.22
APOB-202ENST00000399256 PYURFQ96I23 114 aa13.69□□□□□ -0.22
APOB-202ENST00000399256 NEK6Q9HC98 313 aa13.69□□□□□ -0.22
APOB-202ENST00000399256 OR2A25A4D2G3 310 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 AGAP5A6NIR3 686 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 F2P00734 622 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 RETP07949 1114 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 ALOX12P18054 663 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 LIPAP38571 399 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 GTF2H2Q13888 395 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 ZNF181Q2M3W8 571 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 FBXL22Q6P050 247 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 GTF2H2CQ6P1K8 395 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 VASH1Q7L8A9 365 aaPredicted RBP13.68□□□□□ -0.22
APOB-202ENST00000399256 TTC29Q8NA56 475 aaPredicted RBP13.68□□□□□ -0.22
APOB-202ENST00000399256 ATL1Q8WXF7 558 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 PROX1Q92786 737 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 B3GALT6Q96L58 329 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 C1orf74Q96LT6 269 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 OR52E6Q96RD3 313 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 CLSTN3Q9BQT9 956 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 MAGIXQ9H6Y5 334 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 EIF3LQ9Y262 564 aaKnown RBP13.68□□□□□ -0.22
APOB-202ENST00000399256 A0A0U1RQS6 177 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 ILVBLA1L0T0 632 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 E5RI56 91 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 hCG_2039718K7EN88 272 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 GPR39O43194 453 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 DYRK3O43781 588 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 GUCA1CO95843 209 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 B3GALT4O96024 378 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 PBX3P40426 434 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 IL10RBQ08334 325 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 EFEMP1Q12805 493 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 MAD2L1BPQ15013 274 aaPredicted RBP13.68□□□□□ -0.22
APOB-202ENST00000399256 UPP1Q16831 310 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 PRSS36Q5K4E3 855 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 RSBN1Q5VWQ0 802 aaPredicted RBP13.68□□□□□ -0.22
APOB-202ENST00000399256 GALNT10Q86SR1 603 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 SPATA2LQ8IUW3 424 aaPredicted RBP13.68□□□□□ -0.22
APOB-202ENST00000399256 PSD4Q8NDX1 1056 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 EXOC2Q96KP1 924 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 PKMYT1Q99640 499 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 APOL4Q9BPW4 351 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 IPPKQ9H8X2 491 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 BPIFA1Q9NP55 256 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 FAM105AQ9NUU6 356 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 FNIP2Q9P278 1114 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 PABPN1LA6NDY0 278 aaKnown RBP13.68□□□□□ -0.22
APOB-202ENST00000399256 METTL15A6NJ78 407 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 TNFRSF10BO14763 440 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 GPR182O15218 404 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 AIREO43918 545 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 POMCP01189 267 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 SLC10A3P09131 477 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 PLEKHG6Q3KR16 790 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 ANKRD46Q86W74 232 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 CELF2-AS1Q8N7Q2 184 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 MDGA1Q8NFP4 955 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 ELMO1Q92556 727 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 C1orf109Q9NX04 203 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 DNAH12Q6ZR08 3092 aa13.68□□□□□ -0.22
APOB-202ENST00000399256 MANSC4A6NHS7 340 aaPredicted RBP13.67□□□□□ -0.22
APOB-202ENST00000399256 TBX18O95935 607 aa13.67□□□□□ -0.22
APOB-202ENST00000399256 SERPINF2P08697 491 aa13.67□□□□□ -0.22
APOB-202ENST00000399256 HSPA7P48741 367 aa13.67□□□□□ -0.22
APOB-202ENST00000399256 SERINC3Q13530 473 aa13.67□□□□□ -0.22
APOB-202ENST00000399256 KEAP1Q14145 624 aa13.67□□□□□ -0.22
APOB-202ENST00000399256 PTPRRQ15256 657 aa13.67□□□□□ -0.22
APOB-202ENST00000399256 ZRANB3Q5FWF4 1079 aa13.67□□□□□ -0.22
APOB-202ENST00000399256 HEATR4Q86WZ0 1026 aa13.67□□□□□ -0.22
APOB-202ENST00000399256 MIB1Q86YT6 1006 aa13.67□□□□□ -0.22
APOB-202ENST00000399256 FATE1Q969F0 183 aa13.67□□□□□ -0.22
APOB-202ENST00000399256 CCDC97Q96F63 343 aaPredicted RBP13.67□□□□□ -0.22
APOB-202ENST00000399256 PPP3R2Q96LZ3 170 aa13.67□□□□□ -0.22
APOB-202ENST00000399256 RPRD1AQ96P16 312 aaPredicted RBP13.67□□□□□ -0.22
APOB-202ENST00000399256 SH3GL1Q99961 368 aa13.67□□□□□ -0.22
APOB-202ENST00000399256 MOV10Q9HCE1 1003 aaKnown RBP13.67□□□□□ -0.22
APOB-202ENST00000399256 FKBPLQ9UIM3 349 aa13.67□□□□□ -0.22
APOB-202ENST00000399256 TLR6Q9Y2C9 796 aa13.67□□□□□ -0.22
APOB-202ENST00000399256 ANKRD34BA5PLL1 514 aa13.67□□□□□ -0.22
APOB-202ENST00000399256 CLDN24A6NM45 220 aa13.67□□□□□ -0.22
APOB-202ENST00000399256 F8W810 466 aa13.67□□□□□ -0.22
APOB-202ENST00000399256 RECQL5O94762 991 aaPredicted RBP13.67□□□□□ -0.22
APOB-202ENST00000399256 KRT75O95678 551 aa13.67□□□□□ -0.22
APOB-202ENST00000399256 GADD45AP24522 165 aa13.67□□□□□ -0.22
APOB-202ENST00000399256 OR1E1P30953 314 aa13.67□□□□□ -0.22
APOB-202ENST00000399256 TPRG1LQ5T0D9 272 aa13.67□□□□□ -0.22
APOB-202ENST00000399256 OVOS1Q6IE37 1185 aa13.67□□□□□ -0.22
APOB-202ENST00000399256 SUSD1Q6UWL2 747 aa13.67□□□□□ -0.22
APOB-202ENST00000399256 CCDC71Q8IV32 467 aaPredicted RBP13.67□□□□□ -0.22
APOB-202ENST00000399256 METTL4Q8N3J2 472 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms