RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 CHCHD3Q9NX63 227 aaKnown RBP12.81□□□□□ -0.36
PRAME-201ENST00000398741 MTRRQ9UBK8 725 aa12.81□□□□□ -0.36
PRAME-201ENST00000398741 K7ERQ8 282 aa12.81□□□□□ -0.36
PRAME-201ENST00000398741 HOXA2O43364 376 aa12.81□□□□□ -0.36
PRAME-201ENST00000398741 RECQL5O94762 991 aaPredicted RBP12.81□□□□□ -0.36
PRAME-201ENST00000398741 CLDN9O95484 217 aa12.81□□□□□ -0.36
PRAME-201ENST00000398741 TRBC1P01850 177 aa12.81□□□□□ -0.36
PRAME-201ENST00000398741 ANXA5P08758 320 aa12.81□□□□□ -0.36
PRAME-201ENST00000398741 INHBBP09529 407 aa12.81□□□□□ -0.36
PRAME-201ENST00000398741 ZNF12P17014 697 aa12.81□□□□□ -0.36
PRAME-201ENST00000398741 S100A3P33764 101 aa12.81□□□□□ -0.36
PRAME-201ENST00000398741 PLA2G16P53816 162 aa12.81□□□□□ -0.36
PRAME-201ENST00000398741 RAD23AP54725 363 aa12.81□□□□□ -0.36
PRAME-201ENST00000398741 CD47Q08722 323 aa12.81□□□□□ -0.36
PRAME-201ENST00000398741 CPSF6Q16630 551 aaKnown RBP eCLIP12.81□□□□□ -0.36
PRAME-201ENST00000398741 GPRC6AQ5T6X5 926 aa12.81□□□□□ -0.36
PRAME-201ENST00000398741 KIAA1841Q6NSI8 718 aa12.81□□□□□ -0.36
PRAME-201ENST00000398741 MACC1Q6ZN28 852 aa12.81□□□□□ -0.36
PRAME-201ENST00000398741 MBOAT1Q6ZNC8 495 aa12.81□□□□□ -0.36
PRAME-201ENST00000398741 DCAF4L2Q8NA75 395 aa12.81□□□□□ -0.36
PRAME-201ENST00000398741 ZNF296Q8WUU4 475 aaPredicted RBP12.81□□□□□ -0.36
PRAME-201ENST00000398741 SGCDQ92629 289 aa12.81□□□□□ -0.36
PRAME-201ENST00000398741 TANKQ92844 425 aa12.81□□□□□ -0.36
PRAME-201ENST00000398741 USP7Q93009 1102 aa12.81□□□□□ -0.36
PRAME-201ENST00000398741 HTATIP2Q9BUP3 242 aa12.81□□□□□ -0.36
PRAME-201ENST00000398741 SLC29A3Q9BZD2 475 aa12.81□□□□□ -0.36
PRAME-201ENST00000398741 RAD21L1Q9H4I0 556 aa12.81□□□□□ -0.36
PRAME-201ENST00000398741 BAG5Q9UL15 447 aa12.81□□□□□ -0.36
PRAME-201ENST00000398741 PCDHB14Q9Y5E9 798 aa12.81□□□□□ -0.36
PRAME-201ENST00000398741 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.8□□□□□ -0.36
PRAME-201ENST00000398741 NBNO60934 754 aa12.8□□□□□ -0.36
PRAME-201ENST00000398741 SEC24AO95486 1093 aa12.8□□□□□ -0.36
PRAME-201ENST00000398741 BPIP17213 487 aa12.8□□□□□ -0.36
PRAME-201ENST00000398741 HOXB6P17509 224 aaKnown RBP12.8□□□□□ -0.36
PRAME-201ENST00000398741 PRKACGP22612 351 aa12.8□□□□□ -0.36
PRAME-201ENST00000398741 HNF1BP35680 557 aa12.8□□□□□ -0.36
PRAME-201ENST00000398741 SPAM1P38567 509 aa12.8□□□□□ -0.36
PRAME-201ENST00000398741 DCTP40126 519 aa12.8□□□□□ -0.36
PRAME-201ENST00000398741 SMAD3P84022 425 aaKnown RBP12.8□□□□□ -0.36
PRAME-201ENST00000398741 CHRNA6Q15825 494 aa12.8□□□□□ -0.36
PRAME-201ENST00000398741 CTU2Q2VPK5 515 aaKnown RBP12.8□□□□□ -0.36
PRAME-201ENST00000398741 RFX4Q33E94 735 aa12.8□□□□□ -0.36
PRAME-201ENST00000398741 ANKRD34AQ69YU3 496 aa12.8□□□□□ -0.36
PRAME-201ENST00000398741 RETSATQ6NUM9 610 aa12.8□□□□□ -0.36
PRAME-201ENST00000398741 GALNT18Q6P9A2 607 aa12.8□□□□□ -0.36
PRAME-201ENST00000398741 HIPK1Q86Z02 1210 aa12.8□□□□□ -0.36
PRAME-201ENST00000398741 ARL10Q8N8L6 244 aa12.8□□□□□ -0.36
PRAME-201ENST00000398741 SELENOMQ8WWX9 145 aa12.8□□□□□ -0.36
PRAME-201ENST00000398741 POP5Q969H6 163 aaKnown RBP12.8□□□□□ -0.36
PRAME-201ENST00000398741 ITCHQ96J02 903 aa12.8□□□□□ -0.36
PRAME-201ENST00000398741 COX4I2Q96KJ9 171 aa12.8□□□□□ -0.36
PRAME-201ENST00000398741 CCDC90BQ9GZT6 254 aa12.8□□□□□ -0.36
PRAME-201ENST00000398741 KCNH6Q9H252 994 aa12.8□□□□□ -0.36
PRAME-201ENST00000398741 RDH14Q9HBH5 336 aa12.8□□□□□ -0.36
PRAME-201ENST00000398741 U3KQV3 271 aa12.8□□□□□ -0.36
PRAME-201ENST00000398741 A0A096LPI6 279 aa12.8□□□□□ -0.36
PRAME-201ENST00000398741 TRBV5-4A0A0C4DH59 114 aa12.8□□□□□ -0.36
PRAME-201ENST00000398741 A8MX80 341 aa12.8□□□□□ -0.36
PRAME-201ENST00000398741 CLPXO76031 633 aa12.8□□□□□ -0.36
PRAME-201ENST00000398741 AGXTP21549 392 aa12.8□□□□□ -0.36
PRAME-201ENST00000398741 BMXP51813 675 aa12.8□□□□□ -0.36
PRAME-201ENST00000398741 PHEXP78562 749 aa12.8□□□□□ -0.36
PRAME-201ENST00000398741 PIGFQ07326 219 aa12.8□□□□□ -0.36
PRAME-201ENST00000398741 GRAMD4Q6IC98 578 aa12.8□□□□□ -0.36
PRAME-201ENST00000398741 DET1Q7L5Y6 550 aa12.8□□□□□ -0.36
PRAME-201ENST00000398741 NETO1Q8TDF5 533 aa12.8□□□□□ -0.36
PRAME-201ENST00000398741 PYURFQ96I23 114 aa12.8□□□□□ -0.36
PRAME-201ENST00000398741 NODALQ96S42 347 aa12.8□□□□□ -0.36
PRAME-201ENST00000398741 CPPED1Q9BRF8 314 aaPredicted RBP12.8□□□□□ -0.36
PRAME-201ENST00000398741 C2orf49Q9BVC5 232 aaPredicted RBP12.8□□□□□ -0.36
PRAME-201ENST00000398741 ACPTQ9BZG2 426 aa12.8□□□□□ -0.36
PRAME-201ENST00000398741 PALMDQ9NP74 551 aa12.8□□□□□ -0.36
PRAME-201ENST00000398741 ARL15Q9NXU5 204 aa12.8□□□□□ -0.36
PRAME-201ENST00000398741 AFF4Q9UHB7 1163 aaKnown RBP12.8□□□□□ -0.36
PRAME-201ENST00000398741 TRBV5-3A0A0A0MS03 114 aa12.79□□□□□ -0.36
PRAME-201ENST00000398741 A0A1W2PQ45 241 aaPredicted RBP12.79□□□□□ -0.36
PRAME-201ENST00000398741 A0A1W2PQY0 241 aa12.79□□□□□ -0.36
PRAME-201ENST00000398741 PABPN1LA6NDY0 278 aaKnown RBP12.79□□□□□ -0.36
PRAME-201ENST00000398741 PTGES3LE9PB15 166 aa12.79□□□□□ -0.36
PRAME-201ENST00000398741 ARVCFO00192 962 aa12.79□□□□□ -0.36
PRAME-201ENST00000398741 SLC1A7O00341 560 aa12.79□□□□□ -0.36
PRAME-201ENST00000398741 BCKDKO14874 412 aa12.79□□□□□ -0.36
PRAME-201ENST00000398741 PER2O15055 1255 aa12.79□□□□□ -0.36
PRAME-201ENST00000398741 PDYNP01213 254 aa12.79□□□□□ -0.36
PRAME-201ENST00000398741 GSNP06396 782 aa12.79□□□□□ -0.36
PRAME-201ENST00000398741 OCM2P0CE71 109 aa12.79□□□□□ -0.36
PRAME-201ENST00000398741 OCMP0CE72 109 aaPredicted RBP12.79□□□□□ -0.36
PRAME-201ENST00000398741 HOXD10P28358 340 aa12.79□□□□□ -0.36
PRAME-201ENST00000398741 GKP32189 559 aa12.79□□□□□ -0.36
PRAME-201ENST00000398741 SPIDRQ14159 915 aa12.79□□□□□ -0.36
PRAME-201ENST00000398741 NR1D2Q14995 579 aa12.79□□□□□ -0.36
PRAME-201ENST00000398741 VEPH1Q14D04 833 aa12.79□□□□□ -0.36
PRAME-201ENST00000398741 PGS1Q32NB8 556 aa12.79□□□□□ -0.36
PRAME-201ENST00000398741 GPR33Q49SQ1 333 aa12.79□□□□□ -0.36
PRAME-201ENST00000398741 ZNF691Q5VV52 312 aa12.79□□□□□ -0.36
PRAME-201ENST00000398741 GTF2IRD2BQ6EKJ0 949 aa12.79□□□□□ -0.36
PRAME-201ENST00000398741 CRTC3Q6UUV7 619 aa12.79□□□□□ -0.36
PRAME-201ENST00000398741 TMEM179BQ7Z7N9 219 aa12.79□□□□□ -0.36
PRAME-201ENST00000398741 RBM23Q86U06 439 aaKnown RBP12.79□□□□□ -0.36
PRAME-201ENST00000398741 GTF2IRD2Q86UP8 949 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms