RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 DSG4Q86SJ6 1040 aa2.57□□□□□ -2
CD47-203ENST00000398258 TMPRSS11BQ86T26 416 aa2.57□□□□□ -2
CD47-203ENST00000398258 TLK2Q86UE8 772 aa2.57□□□□□ -2
CD47-203ENST00000398258 ZNF611Q8N823 705 aa2.57□□□□□ -2
CD47-203ENST00000398258 TRIML1Q8N9V2 468 aa2.57□□□□□ -2
CD47-203ENST00000398258 NPEPL1Q8NDH3 523 aa2.57□□□□□ -2
CD47-203ENST00000398258 SSMEM1Q8WWF3 244 aa2.57□□□□□ -2
CD47-203ENST00000398258 CORO2AQ92828 525 aa2.57□□□□□ -2
CD47-203ENST00000398258 SECISBP2LQ93073 1101 aaKnown RBP2.57□□□□□ -2
CD47-203ENST00000398258 MR1Q95460 341 aa2.57□□□□□ -2
CD47-203ENST00000398258 MOB3AQ96BX8 217 aa2.57□□□□□ -2
CD47-203ENST00000398258 LINGO1Q96FE5 620 aa2.57□□□□□ -2
CD47-203ENST00000398258 OXNAD1Q96HP4 312 aaPredicted RBP2.57□□□□□ -2
CD47-203ENST00000398258 SFXN2Q96NB2 322 aa2.57□□□□□ -2
CD47-203ENST00000398258 ZNF558Q96NG5 402 aa2.57□□□□□ -2
CD47-203ENST00000398258 GBP5Q96PP8 586 aa2.57□□□□□ -2
CD47-203ENST00000398258 CITED2Q99967 270 aaPredicted RBP2.57□□□□□ -2
CD47-203ENST00000398258 FNDC11Q9BVV2 318 aa2.57□□□□□ -2
CD47-203ENST00000398258 C2orf40Q9H1Z8 148 aa2.57□□□□□ -2
CD47-203ENST00000398258 EVA1AQ9H8M9 152 aa2.57□□□□□ -2
CD47-203ENST00000398258 TBC1D17Q9HA65 648 aa2.57□□□□□ -2
CD47-203ENST00000398258 LRRC4Q9HBW1 653 aa2.57□□□□□ -2
CD47-203ENST00000398258 TCF7L2Q9NQB0 619 aa2.57□□□□□ -2
CD47-203ENST00000398258 SERINC1Q9NRX5 453 aa2.57□□□□□ -2
CD47-203ENST00000398258 ABCF3Q9NUQ8 709 aa2.57□□□□□ -2
CD47-203ENST00000398258 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.57□□□□□ -2
CD47-203ENST00000398258 B3GAT1Q9P2W7 334 aa2.57□□□□□ -2
CD47-203ENST00000398258 POU2F3Q9UKI9 436 aa2.57□□□□□ -2
CD47-203ENST00000398258 MTUS1Q9ULD2 1270 aa2.57□□□□□ -2
CD47-203ENST00000398258 PADI2Q9Y2J8 665 aa2.57□□□□□ -2
CD47-203ENST00000398258 TRIM17Q9Y577 477 aa2.57□□□□□ -2
CD47-203ENST00000398258 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.56□□□□□ -2
CD47-203ENST00000398258 HYKKA2RU49 373 aa2.56□□□□□ -2
CD47-203ENST00000398258 OR6C76A6NM76 312 aa2.56□□□□□ -2
CD47-203ENST00000398258 PRAC2D3DTV9 90 aa2.56□□□□□ -2
CD47-203ENST00000398258 E9PI62 339 aa2.56□□□□□ -2
CD47-203ENST00000398258 IFIT3O14879 490 aaKnown RBP2.56□□□□□ -2
CD47-203ENST00000398258 BUB3O43684 328 aa2.56□□□□□ -2
CD47-203ENST00000398258 STX6O43752 255 aa2.56□□□□□ -2
CD47-203ENST00000398258 GBAP04062 536 aa2.56□□□□□ -2
CD47-203ENST00000398258 SNRNP70P08621 437 aaKnown RBP2.56□□□□□ -2
CD47-203ENST00000398258 CBLP22681 906 aa2.56□□□□□ -2
CD47-203ENST00000398258 SP100P23497 879 aaPredicted RBP2.56□□□□□ -2
CD47-203ENST00000398258 TLX1P31314 330 aaPredicted RBP2.56□□□□□ -2
CD47-203ENST00000398258 CTNNA1P35221 906 aaKnown RBP2.56□□□□□ -2
CD47-203ENST00000398258 PTGER4P35408 488 aa2.56□□□□□ -2
CD47-203ENST00000398258 HOXA1P49639 335 aaPredicted RBP2.56□□□□□ -2
CD47-203ENST00000398258 GMPSP49915 693 aaPredicted RBP2.56□□□□□ -2
CD47-203ENST00000398258 BMXP51813 675 aa2.56□□□□□ -2
CD47-203ENST00000398258 CAPZA1P52907 286 aa2.56□□□□□ -2
CD47-203ENST00000398258 SCN1BQ07699 218 aa2.56□□□□□ -2
CD47-203ENST00000398258 CUL3Q13618 768 aa2.56□□□□□ -2
CD47-203ENST00000398258 CA9Q16790 459 aa2.56□□□□□ -2
CD47-203ENST00000398258 MEP1BQ16820 701 aa2.56□□□□□ -2
CD47-203ENST00000398258 CDO1Q16878 200 aa2.56□□□□□ -2
CD47-203ENST00000398258 ZNF718Q3SXZ3 478 aa2.56□□□□□ -2
CD47-203ENST00000398258 SLC10A5Q5PT55 438 aa2.56□□□□□ -2
CD47-203ENST00000398258 FAM91A1Q658Y4 838 aa2.56□□□□□ -2
CD47-203ENST00000398258 KRT39Q6A163 491 aa2.56□□□□□ -2
CD47-203ENST00000398258 ZBTB49Q6ZSB9 765 aa2.56□□□□□ -2
CD47-203ENST00000398258 FOXL2NBQ6ZUU3 175 aa2.56□□□□□ -2
CD47-203ENST00000398258 LONP2Q86WA8 852 aa2.56□□□□□ -2
CD47-203ENST00000398258 COMMD2Q86X83 199 aa2.56□□□□□ -2
CD47-203ENST00000398258 PLD3Q8IV08 490 aa2.56□□□□□ -2
CD47-203ENST00000398258 CRYBG2Q8N1P7 616 aa2.56□□□□□ -2
CD47-203ENST00000398258 BMPERQ8N8U9 685 aa2.56□□□□□ -2
CD47-203ENST00000398258 OR13J1Q8NGT2 312 aa2.56□□□□□ -2
CD47-203ENST00000398258 ZFAND2BQ8WV99 257 aa2.56□□□□□ -2
CD47-203ENST00000398258 SECTM1Q8WVN6 248 aa2.56□□□□□ -2
CD47-203ENST00000398258 PKP4Q99569 1192 aa2.56□□□□□ -2
CD47-203ENST00000398258 INPP5KQ9BT40 448 aa2.56□□□□□ -2
CD47-203ENST00000398258 THUMPD3Q9BV44 507 aaKnown RBP2.56□□□□□ -2
CD47-203ENST00000398258 Q9H8V8 135 aa2.56□□□□□ -2
CD47-203ENST00000398258 ZNF556Q9HAH1 456 aa2.56□□□□□ -2
CD47-203ENST00000398258 CDH20Q9HBT6 801 aa2.56□□□□□ -2
CD47-203ENST00000398258 APOBEC3GQ9HC16 384 aaKnown RBP2.56□□□□□ -2
CD47-203ENST00000398258 XAB2Q9HCS7 855 aaKnown RBP2.56□□□□□ -2
CD47-203ENST00000398258 TRPC7Q9HCX4 862 aa2.56□□□□□ -2
CD47-203ENST00000398258 MRGBPQ9NV56 204 aa2.56□□□□□ -2
CD47-203ENST00000398258 SPHK1Q9NYA1 384 aa2.56□□□□□ -2
CD47-203ENST00000398258 DNAJB9Q9UBS3 223 aa2.56□□□□□ -2
CD47-203ENST00000398258 RASAL2Q9UJF2 1139 aa2.56□□□□□ -2
CD47-203ENST00000398258 LEF1Q9UJU2 399 aaPredicted RBP2.56□□□□□ -2
CD47-203ENST00000398258 ICAM5Q9UMF0 924 aa2.56□□□□□ -2
CD47-203ENST00000398258 SNX7Q9UNH6 387 aa2.56□□□□□ -2
CD47-203ENST00000398258 LIPT1Q9Y234 373 aa2.56□□□□□ -2
CD47-203ENST00000398258 PCDH11YQ9BZA8 1340 aa2.56□□□□□ -2
CD47-203ENST00000398258 KIF26BQ2KJY2 2108 aa2.56□□□□□ -2
CD47-203ENST00000398258 IGLV5-45A0A087WSX0 123 aa2.55□□□□□ -2
CD47-203ENST00000398258 TRAV34A0A0B4J273 112 aa2.55□□□□□ -2
CD47-203ENST00000398258 A0A1W2PN81 502 aa2.55□□□□□ -2
CD47-203ENST00000398258 ERI2A8K979 691 aaKnown RBP2.55□□□□□ -2
CD47-203ENST00000398258 O00370 1275 aa2.55□□□□□ -2
CD47-203ENST00000398258 DNM1LO00429 736 aa2.55□□□□□ -2
CD47-203ENST00000398258 GAPDHSO14556 408 aaPredicted RBP2.55□□□□□ -2
CD47-203ENST00000398258 AP5Z1O43299 807 aa2.55□□□□□ -2
CD47-203ENST00000398258 PRKNO60260 465 aaPredicted RBP2.55□□□□□ -2
CD47-203ENST00000398258 DIAPH2O60879 1101 aa2.55□□□□□ -2
CD47-203ENST00000398258 SOCS5O75159 536 aa2.55□□□□□ -2
CD47-203ENST00000398258 UMODP07911 640 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms