RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 MATN4O95460 622 aa24.57■■□□□ 1.52
TSPAN4-207ENST00000397411 ZBTB11O95625 1053 aaPredicted RBP24.57■■□□□ 1.52
TSPAN4-207ENST00000397411 CHRM5P08912 532 aaPredicted RBP24.57■■□□□ 1.52
TSPAN4-207ENST00000397411 RHOXF2BP0C7M4 288 aa24.57■■□□□ 1.52
TSPAN4-207ENST00000397411 NELFEP18615 380 aaKnown RBP24.57■■□□□ 1.52
TSPAN4-207ENST00000397411 STX2P32856 288 aa24.57■■□□□ 1.52
TSPAN4-207ENST00000397411 CDKN2DP55273 166 aa24.57■■□□□ 1.52
TSPAN4-207ENST00000397411 HSD11B2P80365 405 aa24.57■■□□□ 1.52
TSPAN4-207ENST00000397411 ILF2Q12905 390 aaKnown RBP24.57■■□□□ 1.52
TSPAN4-207ENST00000397411 LRRC8EQ6NSJ5 796 aa24.57■■□□□ 1.52
TSPAN4-207ENST00000397411 CYB5D1Q6P9G0 228 aa24.57■■□□□ 1.52
TSPAN4-207ENST00000397411 FBXO38Q6PIJ6 1188 aa24.57■■□□□ 1.52
TSPAN4-207ENST00000397411 CEACAM20Q6UY09 585 aa24.57■■□□□ 1.52
TSPAN4-207ENST00000397411 CYS1Q717R9 158 aa24.57■■□□□ 1.52
TSPAN4-207ENST00000397411 CARFQ8N187 725 aa24.57■■□□□ 1.52
TSPAN4-207ENST00000397411 C2orf73Q8N5S3 287 aaPredicted RBP24.57■■□□□ 1.52
TSPAN4-207ENST00000397411 SNIP1Q8TAD8 396 aaKnown RBP24.57■■□□□ 1.52
TSPAN4-207ENST00000397411 IL17FQ96PD4 163 aa24.57■■□□□ 1.52
TSPAN4-207ENST00000397411 CTRCQ99895 268 aa24.57■■□□□ 1.52
TSPAN4-207ENST00000397411 RHOXF2Q9BQY4 288 aa24.57■■□□□ 1.52
TSPAN4-207ENST00000397411 LRRC4CQ9HCJ2 640 aa24.57■■□□□ 1.52
TSPAN4-207ENST00000397411 FBXO8Q9NRD0 319 aa24.57■■□□□ 1.52
TSPAN4-207ENST00000397411 C1GALT1Q9NS00 363 aa24.57■■□□□ 1.52
TSPAN4-207ENST00000397411 PSAT1Q9Y617 370 aa24.57■■□□□ 1.52
TSPAN4-207ENST00000397411 URB1O60287 2271 aaKnown RBP24.57■■□□□ 1.52
TSPAN4-207ENST00000397411 RASGRF2O14827 1237 aa24.56■■□□□ 1.52
TSPAN4-207ENST00000397411 ZBTB14O43829 449 aa24.56■■□□□ 1.52
TSPAN4-207ENST00000397411 TPBGLP0DKB5 382 aa24.56■■□□□ 1.52
TSPAN4-207ENST00000397411 CD9P21926 228 aa24.56■■□□□ 1.52
TSPAN4-207ENST00000397411 PKLRP30613 574 aa24.56■■□□□ 1.52
TSPAN4-207ENST00000397411 SLC12A2P55011 1212 aa24.56■■□□□ 1.52
TSPAN4-207ENST00000397411 GPX6P59796 221 aa24.56■■□□□ 1.52
TSPAN4-207ENST00000397411 ANKS6Q68DC2 871 aa24.56■■□□□ 1.52
TSPAN4-207ENST00000397411 PAQR3Q6TCH7 311 aa24.56■■□□□ 1.52
TSPAN4-207ENST00000397411 MYO1HQ8N1T3 1032 aa24.56■■□□□ 1.52
TSPAN4-207ENST00000397411 EEF1AKMT1Q8WVE0 214 aa24.56■■□□□ 1.52
TSPAN4-207ENST00000397411 OR6C1Q96RD1 312 aa24.56■■□□□ 1.52
TSPAN4-207ENST00000397411 FMO2Q99518 471 aa24.56■■□□□ 1.52
TSPAN4-207ENST00000397411 DDA1Q9BW61 102 aa24.56■■□□□ 1.52
TSPAN4-207ENST00000397411 B3GNT4Q9C0J1 378 aa24.56■■□□□ 1.52
TSPAN4-207ENST00000397411 ACACAQ13085 2346 aa24.56■■□□□ 1.52
TSPAN4-207ENST00000397411 SLC9B1P1A6NJY1 282 aa24.55■■□□□ 1.52
TSPAN4-207ENST00000397411 SRRM3A6NNA2 597 aaPredicted RBP24.55■■□□□ 1.52
TSPAN4-207ENST00000397411 C9orf172C9J069 976 aa24.55■■□□□ 1.52
TSPAN4-207ENST00000397411 EIF3FO00303 357 aaPredicted RBP24.55■■□□□ 1.52
TSPAN4-207ENST00000397411 PIAS1O75925 651 aa24.55■■□□□ 1.52
TSPAN4-207ENST00000397411 SYF2O95926 243 aaKnown RBP24.55■■□□□ 1.52
TSPAN4-207ENST00000397411 IL2P60568 153 aa24.55■■□□□ 1.52
TSPAN4-207ENST00000397411 SH3BP2P78314 561 aa24.55■■□□□ 1.52
TSPAN4-207ENST00000397411 KIR2DS3Q14952 304 aa24.55■■□□□ 1.52
TSPAN4-207ENST00000397411 ZC3HC1Q86WB0 502 aaKnown RBP24.55■■□□□ 1.52
TSPAN4-207ENST00000397411 BMPERQ8N8U9 685 aa24.55■■□□□ 1.52
TSPAN4-207ENST00000397411 FBF1Q8TES7 1133 aa24.55■■□□□ 1.52
TSPAN4-207ENST00000397411 KCNE4Q8WWG9 221 aa24.55■■□□□ 1.52
TSPAN4-207ENST00000397411 SLC22A18Q96BI1 424 aa24.55■■□□□ 1.52
TSPAN4-207ENST00000397411 VPS39Q96JC1 886 aa24.55■■□□□ 1.52
TSPAN4-207ENST00000397411 TEFMQ96QE5 360 aaKnown RBP24.55■■□□□ 1.52
TSPAN4-207ENST00000397411 PDE7BQ9NP56 450 aa24.55■■□□□ 1.52
TSPAN4-207ENST00000397411 SMYD2Q9NRG4 433 aa24.55■■□□□ 1.52
TSPAN4-207ENST00000397411 SEMA5BQ9P283 1151 aa24.55■■□□□ 1.52
TSPAN4-207ENST00000397411 PCDHGA3Q9Y5H0 932 aa24.55■■□□□ 1.52
TSPAN4-207ENST00000397411 B3GALT1Q9Y5Z6 326 aa24.55■■□□□ 1.52
TSPAN4-207ENST00000397411 IGF2RP11717 2491 aa24.55■■□□□ 1.52
TSPAN4-207ENST00000397411 MAP1BP46821 2468 aaKnown RBP24.55■■□□□ 1.52
TSPAN4-207ENST00000397411 FAM95CA0A1B0GW59 222 aa24.54■■□□□ 1.52
TSPAN4-207ENST00000397411 CXorf49A8MYA2 514 aaPredicted RBP24.54■■□□□ 1.52
TSPAN4-207ENST00000397411 PSIP1O75475 530 aaKnown RBP24.54■■□□□ 1.52
TSPAN4-207ENST00000397411 UGT2B7P16662 529 aa24.54■■□□□ 1.52
TSPAN4-207ENST00000397411 PHBP35232 272 aa24.54■■□□□ 1.52
TSPAN4-207ENST00000397411 EIF2S3P41091 472 aaKnown RBP24.54■■□□□ 1.52
TSPAN4-207ENST00000397411 ACY1Q03154 408 aa24.54■■□□□ 1.52
TSPAN4-207ENST00000397411 GRB7Q14451 532 aa24.54■■□□□ 1.52
TSPAN4-207ENST00000397411 CCSMST1Q4G0I0 132 aa24.54■■□□□ 1.52
TSPAN4-207ENST00000397411 SPESP1Q6UW49 350 aa24.54■■□□□ 1.52
TSPAN4-207ENST00000397411 PIWIL4Q7Z3Z4 852 aaKnown RBP24.54■■□□□ 1.52
TSPAN4-207ENST00000397411 TAX1BP1Q86VP1 789 aa24.54■■□□□ 1.52
TSPAN4-207ENST00000397411 PPM1NQ8N819 430 aa24.54■■□□□ 1.52
TSPAN4-207ENST00000397411 OR9A1PQ8NGU1 263 aa24.54■■□□□ 1.52
TSPAN4-207ENST00000397411 OR2L8Q8NGY9 312 aa24.54■■□□□ 1.52
TSPAN4-207ENST00000397411 SLC41A2Q96JW4 573 aa24.54■■□□□ 1.52
TSPAN4-207ENST00000397411 PPM1MQ96MI6 270 aa24.54■■□□□ 1.52
TSPAN4-207ENST00000397411 CPNE1Q99829 537 aa24.54■■□□□ 1.52
TSPAN4-207ENST00000397411 ZPBPQ9BS86 351 aa24.54■■□□□ 1.52
TSPAN4-207ENST00000397411 RHOJQ9H4E5 214 aa24.54■■□□□ 1.52
TSPAN4-207ENST00000397411 SPHK1Q9NYA1 384 aa24.54■■□□□ 1.52
TSPAN4-207ENST00000397411 FOXJ2Q9P0K8 574 aa24.54■■□□□ 1.52
TSPAN4-207ENST00000397411 CAMSAP3Q9P1Y5 1249 aaPredicted RBP24.54■■□□□ 1.52
TSPAN4-207ENST00000397411 PABPN1LA6NDY0 278 aaKnown RBP24.53■■□□□ 1.52
TSPAN4-207ENST00000397411 FAM159BA6NKW6 160 aa24.53■■□□□ 1.52
TSPAN4-207ENST00000397411 FDXRP22570 491 aa24.53■■□□□ 1.52
TSPAN4-207ENST00000397411 CD82P27701 267 aa24.53■■□□□ 1.52
TSPAN4-207ENST00000397411 TIAL1Q01085 375 aaKnown RBP eCLIP24.53■■□□□ 1.52
TSPAN4-207ENST00000397411 IL11RAQ14626 422 aa24.53■■□□□ 1.52
TSPAN4-207ENST00000397411 KCNAB1Q14722 419 aa24.53■■□□□ 1.52
TSPAN4-207ENST00000397411 CYHR1Q6ZMK1 362 aa24.53■■□□□ 1.52
TSPAN4-207ENST00000397411 UBE2R2Q712K3 238 aaPredicted RBP24.53■■□□□ 1.52
TSPAN4-207ENST00000397411 ZFAND4Q86XD8 727 aa24.53■■□□□ 1.52
TSPAN4-207ENST00000397411 RASGRP3Q8IV61 690 aa24.53■■□□□ 1.52
TSPAN4-207ENST00000397411 SPNS2Q8IVW8 549 aa24.53■■□□□ 1.52
TSPAN4-207ENST00000397411 ASB11Q8WXH4 323 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms