RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 SPNP16150 400 aa13.62□□□□□ -0.23
NUP98-204ENST00000397004 THPOP40225 353 aa13.62□□□□□ -0.23
NUP98-204ENST00000397004 CLLU1OSQ5K130 101 aa13.62□□□□□ -0.23
NUP98-204ENST00000397004 FAM171A1Q5VUB5 890 aa13.62□□□□□ -0.23
NUP98-204ENST00000397004 AGAP7PQ5VUJ5 663 aa13.62□□□□□ -0.23
NUP98-204ENST00000397004 Q6ZPB1 254 aaPredicted RBP13.62□□□□□ -0.23
NUP98-204ENST00000397004 PRR23BQ6ZRT6 265 aa13.62□□□□□ -0.23
NUP98-204ENST00000397004 ZCCHC7Q8N3Z6 543 aaKnown RBP13.62□□□□□ -0.23
NUP98-204ENST00000397004 SVOPLQ8N434 492 aa13.62□□□□□ -0.23
NUP98-204ENST00000397004 REXO5Q96IC2 774 aaKnown RBP13.62□□□□□ -0.23
NUP98-204ENST00000397004 ABCG8Q9H221 673 aa13.62□□□□□ -0.23
NUP98-204ENST00000397004 SIAEQ9HAT2 523 aa13.62□□□□□ -0.23
NUP98-204ENST00000397004 SEPT3Q9UH03 358 aa13.62□□□□□ -0.23
NUP98-204ENST00000397004 RAI2Q9Y5P3 530 aa13.62□□□□□ -0.23
NUP98-204ENST00000397004 PIKFYVEQ9Y2I7 2098 aa13.61□□□□□ -0.23
NUP98-204ENST00000397004 DYTNA2CJ06 578 aa13.61□□□□□ -0.23
NUP98-204ENST00000397004 GNGT2O14610 69 aa13.61□□□□□ -0.23
NUP98-204ENST00000397004 LPOP22079 712 aaPredicted RBP13.61□□□□□ -0.23
NUP98-204ENST00000397004 CTGFP29279 349 aa13.61□□□□□ -0.23
NUP98-204ENST00000397004 GRK5P34947 590 aa13.61□□□□□ -0.23
NUP98-204ENST00000397004 MAGEA2P43356 314 aa13.61□□□□□ -0.23
NUP98-204ENST00000397004 CRYBA2P53672 197 aa13.61□□□□□ -0.23
NUP98-204ENST00000397004 SOWAHCQ53LP3 525 aaPredicted RBP13.61□□□□□ -0.23
NUP98-204ENST00000397004 SYT6Q5T7P8 510 aaPredicted RBP13.61□□□□□ -0.23
NUP98-204ENST00000397004 EFL1Q7Z2Z2 1120 aaKnown RBP13.61□□□□□ -0.23
NUP98-204ENST00000397004 SLC22A16Q86VW1 577 aa13.61□□□□□ -0.23
NUP98-204ENST00000397004 RNF175Q8N4F7 328 aa13.61□□□□□ -0.23
NUP98-204ENST00000397004 OR52E4Q8NGH9 312 aa13.61□□□□□ -0.23
NUP98-204ENST00000397004 FBXO32Q969P5 355 aa13.61□□□□□ -0.23
NUP98-204ENST00000397004 MIR1-1HGQ9H1L0 117 aa13.61□□□□□ -0.23
NUP98-204ENST00000397004 GIN1Q9NXP7 522 aa13.61□□□□□ -0.23
NUP98-204ENST00000397004 PRG3Q9Y2Y8 225 aaPredicted RBP13.61□□□□□ -0.23
NUP98-204ENST00000397004 DHRS7Q9Y394 339 aa13.61□□□□□ -0.23
NUP98-204ENST00000397004 PER2O15055 1255 aa13.61□□□□□ -0.23
NUP98-204ENST00000397004 GSTA4O15217 222 aa13.61□□□□□ -0.23
NUP98-204ENST00000397004 OXSR1O95747 527 aaPredicted RBP13.61□□□□□ -0.23
NUP98-204ENST00000397004 FADS2O95864 444 aaKnown RBP13.61□□□□□ -0.23
NUP98-204ENST00000397004 JUNDP17535 347 aa13.61□□□□□ -0.23
NUP98-204ENST00000397004 VAC14Q08AM6 782 aa13.61□□□□□ -0.23
NUP98-204ENST00000397004 AP5M1Q9H0R1 490 aa13.61□□□□□ -0.23
NUP98-204ENST00000397004 RNF167Q9H6Y7 350 aa13.61□□□□□ -0.23
NUP98-204ENST00000397004 C16orf96A6NNT2 1141 aa13.61□□□□□ -0.23
NUP98-204ENST00000397004 LOC730098B7Z3J9 87 aa13.61□□□□□ -0.23
NUP98-204ENST00000397004 CELF2O95319 508 aaKnown RBP13.61□□□□□ -0.23
NUP98-204ENST00000397004 ALPIP09923 528 aa13.61□□□□□ -0.23
NUP98-204ENST00000397004 PABPC1P11940 636 aaKnown RBP13.61□□□□□ -0.23
NUP98-204ENST00000397004 BCKDHAP12694 445 aa13.61□□□□□ -0.23
NUP98-204ENST00000397004 CD9P21926 228 aa13.61□□□□□ -0.23
NUP98-204ENST00000397004 MAPKAPK2P49137 400 aa13.61□□□□□ -0.23
NUP98-204ENST00000397004 TPD52P55327 224 aaPredicted RBP13.61□□□□□ -0.23
NUP98-204ENST00000397004 VLDLRP98155 873 aa13.61□□□□□ -0.23
NUP98-204ENST00000397004 IQCCQ4KMZ1 466 aa13.61□□□□□ -0.23
NUP98-204ENST00000397004 GNASQ5JWF2 1037 aa13.61□□□□□ -0.23
NUP98-204ENST00000397004 CAPN13Q6MZZ7 669 aaPredicted RBP13.61□□□□□ -0.23
NUP98-204ENST00000397004 CCDC81Q6ZN84 652 aa13.61□□□□□ -0.23
NUP98-204ENST00000397004 PLEKHG7Q6ZR37 379 aa13.61□□□□□ -0.23
NUP98-204ENST00000397004 VTCN1Q7Z7D3 282 aa13.61□□□□□ -0.23
NUP98-204ENST00000397004 Q8N9G6 341 aaPredicted RBP13.61□□□□□ -0.23
NUP98-204ENST00000397004 GLMNQ92990 594 aa13.61□□□□□ -0.23
NUP98-204ENST00000397004 OR52E6Q96RD3 313 aa13.61□□□□□ -0.23
NUP98-204ENST00000397004 ACPTQ9BZG2 426 aa13.61□□□□□ -0.23
NUP98-204ENST00000397004 CIPCQ9C0C6 399 aa13.61□□□□□ -0.23
NUP98-204ENST00000397004 ACOT13Q9NPJ3 140 aa13.61□□□□□ -0.23
NUP98-204ENST00000397004 M0QZ92 97 aa13.6□□□□□ -0.23
NUP98-204ENST00000397004 RETP07949 1114 aa13.6□□□□□ -0.23
NUP98-204ENST00000397004 FCGRTP55899 365 aa13.6□□□□□ -0.23
NUP98-204ENST00000397004 ARF5P84085 180 aa13.6□□□□□ -0.23
NUP98-204ENST00000397004 KDM4DQ6B0I6 523 aa13.6□□□□□ -0.23
NUP98-204ENST00000397004 KATNAL1Q9BW62 490 aa13.6□□□□□ -0.23
NUP98-204ENST00000397004 HMG20AQ9NP66 347 aa13.6□□□□□ -0.23
NUP98-204ENST00000397004 TMEM184CQ9NVA4 438 aa13.6□□□□□ -0.23
NUP98-204ENST00000397004 NUDT4Q9NZJ9 180 aa13.6□□□□□ -0.23
NUP98-204ENST00000397004 MBD1Q9UIS9 605 aaPredicted RBP13.6□□□□□ -0.23
NUP98-204ENST00000397004 C3orf18Q9UK00 162 aa13.6□□□□□ -0.23
NUP98-204ENST00000397004 E9PQ18 207 aa13.6□□□□□ -0.23
NUP98-204ENST00000397004 SCAMP3O14828 347 aaKnown RBP13.6□□□□□ -0.23
NUP98-204ENST00000397004 PCDHGA12O60330 932 aa13.6□□□□□ -0.23
NUP98-204ENST00000397004 PRAMEF4O60810 478 aa13.6□□□□□ -0.23
NUP98-204ENST00000397004 CNOT3O75175 753 aaKnown RBP13.6□□□□□ -0.23
NUP98-204ENST00000397004 KRT20P35900 424 aa13.6□□□□□ -0.23
NUP98-204ENST00000397004 LIPAP38571 399 aa13.6□□□□□ -0.23
NUP98-204ENST00000397004 CLCN4P51793 760 aa13.6□□□□□ -0.23
NUP98-204ENST00000397004 NEK2P51955 445 aa13.6□□□□□ -0.23
NUP98-204ENST00000397004 PRAMEF9Q5VWM5 478 aa13.6□□□□□ -0.23
NUP98-204ENST00000397004 PSD4Q8NDX1 1056 aa13.6□□□□□ -0.23
NUP98-204ENST00000397004 PYURFQ96I23 114 aa13.6□□□□□ -0.23
NUP98-204ENST00000397004 CLSTN3Q9BQT9 956 aa13.6□□□□□ -0.23
NUP98-204ENST00000397004 ZBTB20Q9HC78 741 aaPredicted RBP13.6□□□□□ -0.23
NUP98-204ENST00000397004 C2orf81A6NN90 581 aa13.6□□□□□ -0.23
NUP98-204ENST00000397004 YY2O15391 372 aa13.6□□□□□ -0.23
NUP98-204ENST00000397004 KCNK2O95069 426 aa13.6□□□□□ -0.23
NUP98-204ENST00000397004 GJB5O95377 273 aa13.6□□□□□ -0.23
NUP98-204ENST00000397004 ITGAMP11215 1152 aa13.6□□□□□ -0.23
NUP98-204ENST00000397004 TTPAP49638 278 aa13.6□□□□□ -0.23
NUP98-204ENST00000397004 CRISP3P54108 245 aa13.6□□□□□ -0.23
NUP98-204ENST00000397004 FAM189BP81408 668 aa13.6□□□□□ -0.23
NUP98-204ENST00000397004 DSC1Q08554 894 aa13.6□□□□□ -0.23
NUP98-204ENST00000397004 C5orf22Q49AR2 442 aa13.6□□□□□ -0.23
NUP98-204ENST00000397004 TAS2R42Q7RTR8 314 aa13.6□□□□□ -0.23
NUP98-204ENST00000397004 TRIM46Q7Z4K8 759 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms