RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 CXCR6O00574 342 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 RPLP0P05388 317 aaKnown RBP5.35□□□□□ -1.55
VPS13C-204ENST00000395898 S100A6P06703 90 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 ANXA8P13928 327 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 SLC7A1P30825 629 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 FSTL1Q12841 308 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 PAMR1Q6UXH9 720 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 LRRTM4Q86VH4 590 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 ANKRD46Q86W74 232 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 PNLDC1Q8NA58 520 aaKnown RBP5.35□□□□□ -1.55
VPS13C-204ENST00000395898 RPL10LQ96L21 214 aaKnown RBP5.35□□□□□ -1.55
VPS13C-204ENST00000395898 ZSWIM3Q96MP5 696 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 GORASP1Q9BQQ3 440 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 CCM2Q9BSQ5 444 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 FGFBP2Q9BYJ0 223 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 DNAJB9Q9UBS3 223 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 PEX16Q9Y5Y5 336 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 TMEM150CB9EJG8 249 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 COQ9O75208 318 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 SNAPC5O75971 98 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 NR2C1P13056 603 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 RORCP51449 518 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 SCRN3Q0VDG4 424 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 SIM2Q14190 667 aaPredicted RBP5.35□□□□□ -1.55
VPS13C-204ENST00000395898 ARSIQ5FYB1 569 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 ULK3Q6PHR2 472 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 CYP2U1Q7Z449 544 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 CELF5Q8N6W0 485 aaKnown RBP5.35□□□□□ -1.55
VPS13C-204ENST00000395898 SIDT2Q8NBJ9 832 aaKnown RBP5.35□□□□□ -1.55
VPS13C-204ENST00000395898 DGAT2Q96PD7 388 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 TMEM175Q9BSA9 504 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 MRM3Q9HC36 420 aaKnown RBP5.35□□□□□ -1.55
VPS13C-204ENST00000395898 POLR3BQ9NW08 1133 aaPredicted RBP5.35□□□□□ -1.55
VPS13C-204ENST00000395898 AASSQ9UDR5 926 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 SCML2Q9UQR0 700 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 RPL36Q9Y3U8 105 aaKnown RBP5.35□□□□□ -1.55
VPS13C-204ENST00000395898 C2orf71A6NGG8 1288 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 CLDN25C9JDP6 229 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 E7ENX8 843 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 AGRPO00253 132 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 COL6A1P12109 1028 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 ECHS1P30084 290 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 GNALP38405 381 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 SLC1A2P43004 574 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 PYHIN1Q6K0P9 492 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 TMEM17Q86X19 198 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 HID1Q8IV36 788 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 GPR65Q8IYL9 337 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 ASB9Q96DX5 294 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 RETREG1Q9H6L5 497 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 METTL21EPA6NDL7 271 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 IQCF5A8MTL0 148 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 ANKRD66B4E2M5 251 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 H0YJX3 145 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 KMOO15229 486 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 DNASE1L1P49184 302 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 GBX2P52951 348 aaPredicted RBP5.35□□□□□ -1.55
VPS13C-204ENST00000395898 SEMA3AQ14563 771 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 EML3Q32P44 896 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 CARD16Q5EG05 197 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 ADNP2Q6IQ32 1131 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 SLC29A4Q7RTT9 530 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 LRRC70Q7Z2Q7 622 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 PYROXD2Q8N2H3 581 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 BANPQ8N9N5 519 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 SCGB3A2Q96PL1 93 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 BHLHE41Q9C0J9 482 aaPredicted RBP5.35□□□□□ -1.55
VPS13C-204ENST00000395898 ANKHQ9HCJ1 492 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 FARSBQ9NSD9 589 aaKnown RBP5.35□□□□□ -1.55
VPS13C-204ENST00000395898 FLRT1Q9NZU1 646 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 EIF2B4Q9UI10 523 aaKnown RBP5.35□□□□□ -1.55
VPS13C-204ENST00000395898 POMPQ9Y244 141 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 PCDHB11Q9Y5F2 797 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 RGPD1P0DJD0 1748 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 NEMP2A6NFY4 417 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 UGT1A3P35503 534 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 TAS2R50P59544 299 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 AHSA2Q719I0 299 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 TMEM139Q8IV31 216 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 PARP8Q8N3A8 854 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 NETO2Q8NC67 525 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 C9orf43Q8TAL5 461 aaPredicted RBP5.35□□□□□ -1.55
VPS13C-204ENST00000395898 DNAJA4Q8WW22 397 aaPredicted RBP5.35□□□□□ -1.55
VPS13C-204ENST00000395898 GEMIN6Q8WXD5 167 aaKnown RBP5.35□□□□□ -1.55
VPS13C-204ENST00000395898 LRRC58Q96CX6 371 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 CMTM7Q96FZ5 175 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 ERMAPQ96PL5 475 aaPredicted RBP5.35□□□□□ -1.55
VPS13C-204ENST00000395898 TUBGCP5Q96RT8 1024 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 LGR4Q9BXB1 951 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 MKKSQ9NPJ1 570 aaPredicted RBP5.35□□□□□ -1.55
VPS13C-204ENST00000395898 SDHAF3Q9NRP4 125 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 SEC14L4Q9UDX3 406 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 MKL2Q9ULH7 1088 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 LAMA4Q16363 1823 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 ANXA2P2A6NMY6 339 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 ENPP3O14638 875 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 NRP1O14786 923 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 PCDH7O60245 1069 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 CCNKO75909 580 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 APOC1P02654 83 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms