RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 PCDHGA7Q9Y5G6 932 aa15.52■□□□□ 0.07
SMARCD1-202ENST00000394963 NME4O00746 187 aa15.52■□□□□ 0.07
SMARCD1-202ENST00000394963 CRATP43155 626 aa15.52■□□□□ 0.07
SMARCD1-202ENST00000394963 PRIM2P49643 509 aa15.52■□□□□ 0.07
SMARCD1-202ENST00000394963 DGKEP52429 567 aa15.52■□□□□ 0.07
SMARCD1-202ENST00000394963 TTC33Q6PID6 262 aaPredicted RBP15.52■□□□□ 0.07
SMARCD1-202ENST00000394963 AGTRAPQ6RW13 159 aa15.52■□□□□ 0.07
SMARCD1-202ENST00000394963 OR5AK3PQ8NH89 298 aa15.52■□□□□ 0.07
SMARCD1-202ENST00000394963 C1QTNF3-AMACRE9PGA6 284 aa15.51■□□□□ 0.07
SMARCD1-202ENST00000394963 CYP4B1P13584 511 aa15.51■□□□□ 0.07
SMARCD1-202ENST00000394963 TIMP2P16035 220 aa15.51■□□□□ 0.07
SMARCD1-202ENST00000394963 IST1P53990 364 aa15.51■□□□□ 0.07
SMARCD1-202ENST00000394963 ZNF234Q14588 700 aa15.51■□□□□ 0.07
SMARCD1-202ENST00000394963 ZNF423Q2M1K9 1284 aa15.51■□□□□ 0.07
SMARCD1-202ENST00000394963 ADNP2Q6IQ32 1131 aa15.51■□□□□ 0.07
SMARCD1-202ENST00000394963 SBSNQ6UWP8 590 aa15.51■□□□□ 0.07
SMARCD1-202ENST00000394963 DEFB119Q8N690 84 aa15.51■□□□□ 0.07
SMARCD1-202ENST00000394963 NUS1Q96E22 293 aa15.51■□□□□ 0.07
SMARCD1-202ENST00000394963 L3HYPDHQ96EM0 354 aa15.51■□□□□ 0.07
SMARCD1-202ENST00000394963 ALG14Q96F25 216 aa15.51■□□□□ 0.07
SMARCD1-202ENST00000394963 OR51B4Q9Y5P0 310 aa15.51■□□□□ 0.07
SMARCD1-202ENST00000394963 SPTBP11277 2137 aa15.51■□□□□ 0.07
SMARCD1-202ENST00000394963 MID1O15344 667 aa15.51■□□□□ 0.07
SMARCD1-202ENST00000394963 ACADMP11310 421 aa15.51■□□□□ 0.07
SMARCD1-202ENST00000394963 SLC26A3P40879 764 aa15.51■□□□□ 0.07
SMARCD1-202ENST00000394963 ZNF783Q6ZMS7 281 aa15.51■□□□□ 0.07
SMARCD1-202ENST00000394963 ADIPOR2Q86V24 386 aa15.51■□□□□ 0.07
SMARCD1-202ENST00000394963 OR4K1Q8NGD4 311 aa15.51■□□□□ 0.07
SMARCD1-202ENST00000394963 SPPL2AQ8TCT8 520 aa15.51■□□□□ 0.07
SMARCD1-202ENST00000394963 GLYATL1Q969I3 302 aa15.51■□□□□ 0.07
SMARCD1-202ENST00000394963 PPP1R16AQ96I34 528 aa15.51■□□□□ 0.07
SMARCD1-202ENST00000394963 FERD3LQ96RJ6 166 aa15.51■□□□□ 0.07
SMARCD1-202ENST00000394963 SLC32A1Q9H598 525 aa15.51■□□□□ 0.07
SMARCD1-202ENST00000394963 ADGRE2Q9UHX3 823 aa15.51■□□□□ 0.07
SMARCD1-202ENST00000394963 OTOL1A6NHN0 477 aaPredicted RBP15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 CLCNKAP51800 687 aa15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 PLA2G16P53816 162 aa15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 YBX1P67809 324 aaKnown RBP15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 TIAL1Q01085 375 aaKnown RBP eCLIP15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 HIST2H2ACQ16777 129 aaPredicted RBP15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 UAP1L1Q3KQV9 507 aa15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 HIST2H2AA3Q6FI13 130 aa15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 NANOGP8Q6NSW7 305 aa15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 CLP1Q92989 425 aaKnown RBP15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 RPP25Q9BUL9 199 aaKnown RBP15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 NANOGQ9H9S0 305 aa15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 ANAPC2Q9UJX6 822 aa15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 CNOT6Q9ULM6 557 aaKnown RBP15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 PTGES3LE9PB15 166 aa15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 KIAA0355O15063 1070 aa15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 EIF2S1P05198 315 aaKnown RBP15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 LYNP07948 512 aa15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 C6P13671 934 aa15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 AASDHQ4L235 1098 aaPredicted RBP15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 PIGGQ5H8A4 983 aa15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 LYPLAL1Q5VWZ2 237 aa15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 LILRA6Q6PI73 481 aa15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 Q6ZNB5 142 aa15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 HEATR4Q86WZ0 1026 aa15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 C1orf52Q8N6N3 182 aaKnown RBP15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 FAM47BQ8NA70 645 aa15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 MAGEC3Q8TD91 643 aa15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 SLC13A3Q8WWT9 602 aa15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 PEX13Q92968 403 aa15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 COL26A1Q96A83 441 aa15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 MACROD1Q9BQ69 325 aa15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 TM7SF3Q9NS93 570 aa15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 C1orf109Q9NX04 203 aa15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 MIA3Q5JRA6 1907 aa15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 RTCAO00442 366 aaKnown RBP15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 ARPC2O15144 300 aa15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 VPS4BO75351 444 aa15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 LDLRP01130 860 aa15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 ANXA4P09525 319 aaPredicted RBP15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 EPORP19235 508 aa15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 TACR1P25103 407 aa15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 RPS14P62263 151 aaKnown RBP15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 ZNF542PQ5EBM4 170 aa15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 GALNT5Q7Z7M9 940 aa15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 HMGN2P46Q86SG4 172 aa15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 DSG4Q86SJ6 1040 aa15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 OR2T34Q8NGX1 318 aa15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 OR2T3Q8NH03 318 aa15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 RHBDF1Q96CC6 855 aa15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 OTUB1Q96FW1 271 aaPredicted RBP15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 TRIM4Q9C037 500 aa15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 RHBGQ9H310 441 aa15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 DDX18Q9NVP1 670 aaKnown RBP15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 KLHL20Q9Y2M5 609 aa15.5■□□□□ 0.07
SMARCD1-202ENST00000394963 HS6ST1O60243 411 aa15.49■□□□□ 0.07
SMARCD1-202ENST00000394963 NOBOXO60393 691 aa15.49■□□□□ 0.07
SMARCD1-202ENST00000394963 KAT7O95251 611 aa15.49■□□□□ 0.07
SMARCD1-202ENST00000394963 CLPTM1O96005 669 aa15.49■□□□□ 0.07
SMARCD1-202ENST00000394963 PRKACGP22612 351 aa15.49■□□□□ 0.07
SMARCD1-202ENST00000394963 CDH15P55291 814 aa15.49■□□□□ 0.07
SMARCD1-202ENST00000394963 OR4D2P58180 307 aa15.49■□□□□ 0.07
SMARCD1-202ENST00000394963 PDGFRLQ15198 375 aa15.49■□□□□ 0.07
SMARCD1-202ENST00000394963 Q6ZSR9 355 aa15.49■□□□□ 0.07
SMARCD1-202ENST00000394963 ENDOVQ8N8Q3 282 aaKnown RBP15.49■□□□□ 0.07
SMARCD1-202ENST00000394963 OR7A2PQ8NGA2 310 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms