RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 POLR3BQ9NW08 1133 aaPredicted RBP12.95□□□□□ -0.34
NFKB1-202ENST00000394820 FAM118AQ9NWS6 357 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 USP34Q70CQ2 3546 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 EFCAB10A6NFE3 127 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 MGAT4DA6NG13 374 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 ADAM23O75077 832 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 SNX4O95219 450 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 OR1D2P34982 312 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 ALDH3B2P48448 385 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 SREBF2Q12772 1141 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 ABRQ12979 859 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 SEMA3AQ14563 771 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 STARD3Q14849 445 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 ZNF605Q86T29 641 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 PROSER1Q86XN7 944 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 SPARTQ8N0X7 666 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 TSPAN18Q96SJ8 248 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 RBM4BQ9BQ04 359 aaKnown RBP12.95□□□□□ -0.34
NFKB1-202ENST00000394820 RBM4Q9BWF3 364 aaKnown RBP12.95□□□□□ -0.34
NFKB1-202ENST00000394820 ADGRE3Q9BY15 652 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 KRT6AP02538 564 aa12.94□□□□□ -0.34
NFKB1-202ENST00000394820 KRT6BP04259 564 aa12.94□□□□□ -0.34
NFKB1-202ENST00000394820 HTR1BP28222 390 aa12.94□□□□□ -0.34
NFKB1-202ENST00000394820 MAGEA8P43361 318 aa12.94□□□□□ -0.34
NFKB1-202ENST00000394820 GNPDA1P46926 289 aa12.94□□□□□ -0.34
NFKB1-202ENST00000394820 KRT6CP48668 564 aa12.94□□□□□ -0.34
NFKB1-202ENST00000394820 RFX4Q33E94 735 aa12.94□□□□□ -0.34
NFKB1-202ENST00000394820 RNASE12Q5GAN4 147 aaKnown RBP12.94□□□□□ -0.34
NFKB1-202ENST00000394820 CD300LGQ6UXG3 332 aa12.94□□□□□ -0.34
NFKB1-202ENST00000394820 Q6ZNX1 250 aa12.94□□□□□ -0.34
NFKB1-202ENST00000394820 TMCO2Q7Z6W1 182 aaPredicted RBP12.94□□□□□ -0.34
NFKB1-202ENST00000394820 PIANPQ8IYJ0 282 aa12.94□□□□□ -0.34
NFKB1-202ENST00000394820 SCML4Q8N228 414 aa12.94□□□□□ -0.34
NFKB1-202ENST00000394820 TMEM199Q8N511 208 aa12.94□□□□□ -0.34
NFKB1-202ENST00000394820 OR13J1Q8NGT2 312 aa12.94□□□□□ -0.34
NFKB1-202ENST00000394820 ERVK13-1Q9NX77 482 aa12.94□□□□□ -0.34
NFKB1-202ENST00000394820 PCDHB8Q9UN66 801 aa12.94□□□□□ -0.34
NFKB1-202ENST00000394820 Q9Y3F1 56 aa12.94□□□□□ -0.34
NFKB1-202ENST00000394820 ASB1Q9Y576 335 aa12.94□□□□□ -0.34
NFKB1-202ENST00000394820 SLC22A2O15244 555 aa12.94□□□□□ -0.34
NFKB1-202ENST00000394820 ADCK2Q7Z695 626 aa12.94□□□□□ -0.34
NFKB1-202ENST00000394820 CD99L2Q8TCZ2 262 aa12.94□□□□□ -0.34
NFKB1-202ENST00000394820 NACC2Q96BF6 587 aa12.94□□□□□ -0.34
NFKB1-202ENST00000394820 BIRC8Q96P09 236 aa12.94□□□□□ -0.34
NFKB1-202ENST00000394820 ASB2Q96Q27 587 aa12.94□□□□□ -0.34
NFKB1-202ENST00000394820 RNF38Q9H0F5 515 aa12.94□□□□□ -0.34
NFKB1-202ENST00000394820 CRISPLD1Q9H336 500 aa12.94□□□□□ -0.34
NFKB1-202ENST00000394820 KLHL20Q9Y2M5 609 aa12.94□□□□□ -0.34
NFKB1-202ENST00000394820 LOC730098B7Z3J9 87 aa12.94□□□□□ -0.34
NFKB1-202ENST00000394820 ZNF623O75123 536 aa12.94□□□□□ -0.34
NFKB1-202ENST00000394820 CDH1P12830 882 aa12.94□□□□□ -0.34
NFKB1-202ENST00000394820 SLC11A2P49281 568 aa12.94□□□□□ -0.34
NFKB1-202ENST00000394820 ATP6AP1Q15904 470 aa12.94□□□□□ -0.34
NFKB1-202ENST00000394820 LETMD1Q6P1Q0 360 aa12.94□□□□□ -0.34
NFKB1-202ENST00000394820 SETD9Q8NE22 299 aa12.94□□□□□ -0.34
NFKB1-202ENST00000394820 PHF21AQ96BD5 680 aa12.94□□□□□ -0.34
NFKB1-202ENST00000394820 Q96MT0 163 aa12.94□□□□□ -0.34
NFKB1-202ENST00000394820 FAM126AQ9BYI3 521 aaPredicted RBP12.94□□□□□ -0.34
NFKB1-202ENST00000394820 WDR12Q9GZL7 423 aaKnown RBP12.94□□□□□ -0.34
NFKB1-202ENST00000394820 RMND5AQ9H871 391 aa12.94□□□□□ -0.34
NFKB1-202ENST00000394820 MOSPD1Q9UJG1 213 aa12.94□□□□□ -0.34
NFKB1-202ENST00000394820 ZFP37Q9Y6Q3 630 aaPredicted RBP12.94□□□□□ -0.34
NFKB1-202ENST00000394820 A0A0G2JMZ2 1700 aa12.94□□□□□ -0.34
NFKB1-202ENST00000394820 CAPN15O75808 1086 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 GJB5O95377 273 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 RHOQP17081 205 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 CTSKP43235 329 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 CD97P48960 835 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 ERVPABLB-1P60509 514 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 IRF8Q02556 426 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 RUNDC3AQ59EK9 446 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 NIPAL1Q6NVV3 410 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 ELMSAN1Q6PJG2 1045 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 TAS1R1Q7RTX1 841 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 AMER2Q8N7J2 671 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 CNPPD1Q9BV87 410 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 DNAJB9Q9UBS3 223 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 RAB23Q9ULC3 237 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 CLEC4AQ9UMR7 237 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 SPO11Q9Y5K1 396 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 SBF1O95248 1867 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 LOC285556D6RIA3 1793 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 MUSKO15146 869 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 NDST3O95803 873 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 FGF1P05230 155 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 PGRP06401 933 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 PFKLP17858 780 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 SLC16A1P53985 500 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 CDH12P55289 794 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 PLD1Q13393 1074 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 SPDYE7PQ495Y7 208 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 CCDC80Q76M96 950 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 SPATA19Q7Z5L4 167 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 MRPL10Q7Z7H8 261 aaKnown RBP12.93□□□□□ -0.34
NFKB1-202ENST00000394820 TMEM173Q86WV6 379 aaPredicted RBP12.93□□□□□ -0.34
NFKB1-202ENST00000394820 EGLN2Q96KS0 407 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 BTN2A3PQ96KV6 586 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 VPS35Q96QK1 796 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 AARSD1Q9BTE6 412 aaKnown RBP12.93□□□□□ -0.34
NFKB1-202ENST00000394820 TIGARQ9NQ88 270 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms