RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 TRMT13Q9NUP7 481 aaKnown RBP18.48■□□□□ 0.55
HOXC6-202ENST00000394331 TNFRSF10DQ9UBN6 386 aa18.48■□□□□ 0.55
HOXC6-202ENST00000394331 CPB1P15086 417 aa18.48■□□□□ 0.55
HOXC6-202ENST00000394331 PIK3CBP42338 1070 aa18.48■□□□□ 0.55
HOXC6-202ENST00000394331 SERPINH1P50454 418 aaKnown RBP18.48■□□□□ 0.55
HOXC6-202ENST00000394331 LIMK1P53667 647 aa18.48■□□□□ 0.55
HOXC6-202ENST00000394331 HERVK_113P63132 956 aa18.48■□□□□ 0.55
HOXC6-202ENST00000394331 FAPQ12884 760 aa18.48■□□□□ 0.55
HOXC6-202ENST00000394331 UNC50Q53HI1 259 aa18.48■□□□□ 0.55
HOXC6-202ENST00000394331 RPS27LQ71UM5 84 aaKnown RBP18.48■□□□□ 0.55
HOXC6-202ENST00000394331 ARHGAP12Q8IWW6 846 aa18.48■□□□□ 0.55
HOXC6-202ENST00000394331 C2orf69Q8N8R5 385 aa18.48■□□□□ 0.55
HOXC6-202ENST00000394331 BRSK1Q8TDC3 778 aa18.48■□□□□ 0.55
HOXC6-202ENST00000394331 GIMAP1Q8WWP7 306 aa18.48■□□□□ 0.55
HOXC6-202ENST00000394331 TMEM80Q96HE8 168 aa18.48■□□□□ 0.55
HOXC6-202ENST00000394331 C17orf62Q9BQA9 187 aa18.48■□□□□ 0.55
HOXC6-202ENST00000394331 ERVK-6Q9BXR3 956 aa18.48■□□□□ 0.55
HOXC6-202ENST00000394331 BRINP2Q9C0B6 783 aa18.48■□□□□ 0.55
HOXC6-202ENST00000394331 ENTPD7Q9NQZ7 604 aa18.48■□□□□ 0.55
HOXC6-202ENST00000394331 AIG1Q9NVV5 245 aa18.48■□□□□ 0.55
HOXC6-202ENST00000394331 ENPP3O14638 875 aa18.47■□□□□ 0.55
HOXC6-202ENST00000394331 AZIN1O14977 448 aa18.47■□□□□ 0.55
HOXC6-202ENST00000394331 MATN3O15232 486 aa18.47■□□□□ 0.55
HOXC6-202ENST00000394331 IRAK2O43187 625 aa18.47■□□□□ 0.55
HOXC6-202ENST00000394331 HGFP14210 728 aa18.47■□□□□ 0.55
HOXC6-202ENST00000394331 PAMP19021 973 aa18.47■□□□□ 0.55
HOXC6-202ENST00000394331 TIE1P35590 1138 aa18.47■□□□□ 0.55
HOXC6-202ENST00000394331 DCTP40126 519 aa18.47■□□□□ 0.55
HOXC6-202ENST00000394331 SPESP1Q6UW49 350 aa18.47■□□□□ 0.55
HOXC6-202ENST00000394331 NCLNQ969V3 563 aa18.47■□□□□ 0.55
HOXC6-202ENST00000394331 GABARAPL1Q9H0R8 117 aa18.47■□□□□ 0.55
HOXC6-202ENST00000394331 POLG2Q9UHN1 485 aa18.47■□□□□ 0.55
HOXC6-202ENST00000394331 VPS4AQ9UN37 437 aa18.47■□□□□ 0.55
HOXC6-202ENST00000394331 AUP1Q9Y679 476 aa18.47■□□□□ 0.55
HOXC6-202ENST00000394331 A8MV72 311 aaPredicted RBP18.47■□□□□ 0.55
HOXC6-202ENST00000394331 B3GAT3O94766 335 aa18.47■□□□□ 0.55
HOXC6-202ENST00000394331 HOXC13P31276 330 aa18.47■□□□□ 0.55
HOXC6-202ENST00000394331 FMO3P31513 532 aa18.47■□□□□ 0.55
HOXC6-202ENST00000394331 IL12RB1P42701 662 aa18.47■□□□□ 0.55
HOXC6-202ENST00000394331 RFX2P48378 723 aa18.47■□□□□ 0.55
HOXC6-202ENST00000394331 CSNK2BP67870 215 aa18.47■□□□□ 0.55
HOXC6-202ENST00000394331 EIF4EBP2Q13542 120 aaPredicted RBP18.47■□□□□ 0.55
HOXC6-202ENST00000394331 PLA2G4EQ3MJ16 856 aa18.47■□□□□ 0.55
HOXC6-202ENST00000394331 TOR2AQ5JU69 321 aa18.47■□□□□ 0.55
HOXC6-202ENST00000394331 MRPL10Q7Z7H8 261 aaKnown RBP18.47■□□□□ 0.55
HOXC6-202ENST00000394331 DENND6AQ8IWF6 608 aa18.47■□□□□ 0.55
HOXC6-202ENST00000394331 ZNF540Q8NDQ6 660 aa18.47■□□□□ 0.55
HOXC6-202ENST00000394331 ST13P5Q8NFI4 369 aaPredicted RBP18.47■□□□□ 0.55
HOXC6-202ENST00000394331 LHFPL5Q8TAF8 219 aa18.47■□□□□ 0.55
HOXC6-202ENST00000394331 C8orf48Q96LL4 319 aa18.47■□□□□ 0.55
HOXC6-202ENST00000394331 PAAF1Q9BRP4 392 aa18.47■□□□□ 0.55
HOXC6-202ENST00000394331 SYT17Q9BSW7 474 aa18.47■□□□□ 0.55
HOXC6-202ENST00000394331 FICDQ9BVA6 458 aa18.47■□□□□ 0.55
HOXC6-202ENST00000394331 RANGRFQ9HD47 186 aaPredicted RBP18.47■□□□□ 0.55
HOXC6-202ENST00000394331 ABCC13Q9NSE7 274 aa18.47■□□□□ 0.55
HOXC6-202ENST00000394331 KLHL21Q9UJP4 597 aa18.47■□□□□ 0.55
HOXC6-202ENST00000394331 NEU3Q9UQ49 428 aa18.47■□□□□ 0.55
HOXC6-202ENST00000394331 GPR182O15218 404 aa18.46■□□□□ 0.55
HOXC6-202ENST00000394331 TRIM3O75382 744 aaPredicted RBP18.46■□□□□ 0.55
HOXC6-202ENST00000394331 MT-CYBP00156 380 aaPredicted RBP18.46■□□□□ 0.55
HOXC6-202ENST00000394331 FTH1P02794 183 aa18.46■□□□□ 0.55
HOXC6-202ENST00000394331 DBTP11182 482 aaKnown RBP18.46■□□□□ 0.55
HOXC6-202ENST00000394331 NKX3-2P78367 333 aa18.46■□□□□ 0.55
HOXC6-202ENST00000394331 IKZF1Q13422 519 aa18.46■□□□□ 0.55
HOXC6-202ENST00000394331 TIGD7Q6NT04 549 aaPredicted RBP18.46■□□□□ 0.55
HOXC6-202ENST00000394331 ARHGAP36Q6ZRI8 547 aa18.46■□□□□ 0.55
HOXC6-202ENST00000394331 PYCR2Q96C36 320 aa18.46■□□□□ 0.55
HOXC6-202ENST00000394331 PHF21BQ96EK2 531 aa18.46■□□□□ 0.55
HOXC6-202ENST00000394331 MAGIXQ9H6Y5 334 aa18.46■□□□□ 0.55
HOXC6-202ENST00000394331 PCM1Q15154 2024 aa18.46■□□□□ 0.55
HOXC6-202ENST00000394331 C9JVG2 144 aa18.46■□□□□ 0.55
HOXC6-202ENST00000394331 MAFKO60675 156 aa18.46■□□□□ 0.55
HOXC6-202ENST00000394331 PGLSO95336 258 aa18.46■□□□□ 0.55
HOXC6-202ENST00000394331 RPLP0P05388 317 aaKnown RBP18.46■□□□□ 0.55
HOXC6-202ENST00000394331 CCR1P32246 355 aa18.46■□□□□ 0.55
HOXC6-202ENST00000394331 SH3BP2P78314 561 aa18.46■□□□□ 0.55
HOXC6-202ENST00000394331 GALNT11Q8NCW6 608 aa18.46■□□□□ 0.55
HOXC6-202ENST00000394331 TSPAN17Q96FV3 270 aa18.46■□□□□ 0.55
HOXC6-202ENST00000394331 EXD2Q9NVH0 621 aa18.46■□□□□ 0.55
HOXC6-202ENST00000394331 ZMAT5Q9UDW3 170 aaKnown RBP18.46■□□□□ 0.55
HOXC6-202ENST00000394331 PAGE1O75459 146 aa18.46■□□□□ 0.55
HOXC6-202ENST00000394331 ALPPP05187 535 aa18.46■□□□□ 0.55
HOXC6-202ENST00000394331 ACADMP11310 421 aa18.46■□□□□ 0.55
HOXC6-202ENST00000394331 LIPAP38571 399 aa18.46■□□□□ 0.55
HOXC6-202ENST00000394331 SLC1A2P43004 574 aa18.46■□□□□ 0.55
HOXC6-202ENST00000394331 CTBP1Q13363 440 aa18.46■□□□□ 0.55
HOXC6-202ENST00000394331 EML3Q32P44 896 aa18.46■□□□□ 0.55
HOXC6-202ENST00000394331 DPY19L3Q6ZPD9 716 aa18.46■□□□□ 0.55
HOXC6-202ENST00000394331 OR10T2Q8NGX3 314 aa18.46■□□□□ 0.55
HOXC6-202ENST00000394331 TUBGCP3Q96CW5 907 aa18.46■□□□□ 0.55
HOXC6-202ENST00000394331 SLC39A8Q9C0K1 460 aa18.46■□□□□ 0.55
HOXC6-202ENST00000394331 INTS7Q9NVH2 962 aaKnown RBP18.46■□□□□ 0.55
HOXC6-202ENST00000394331 ZIM2Q9NZV7 527 aa18.46■□□□□ 0.55
HOXC6-202ENST00000394331 FBXO10Q9UK96 956 aa18.46■□□□□ 0.55
HOXC6-202ENST00000394331 BTRCQ9Y297 605 aa18.46■□□□□ 0.55
HOXC6-202ENST00000394331 HCN4Q9Y3Q4 1203 aa18.46■□□□□ 0.55
HOXC6-202ENST00000394331 PLK4O00444 970 aa18.45■□□□□ 0.54
HOXC6-202ENST00000394331 GNGT2O14610 69 aa18.45■□□□□ 0.54
HOXC6-202ENST00000394331 PLK1P53350 603 aa18.45■□□□□ 0.54
HOXC6-202ENST00000394331 DDR2Q16832 855 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms