RNA–Protein interactions for RNA: ENST00000393579.2

PCNPP3-201, Transcript of PEST containing nuclear protein pseudogene 3, humanhuman

BASIC

Gene PCNPP3, Length 471 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNPP3-201ENST00000393579 PTCH1Q13635 1447 aa0.72□□□□□ -2.29
PCNPP3-201ENST00000393579 CADPSQ9ULU8 1353 aa0.71□□□□□ -2.3
PCNPP3-201ENST00000393579 GOLGA6L10A0A0M3HER8 536 aa0.71□□□□□ -2.3
PCNPP3-201ENST00000393579 A0A1B0GTH9 108 aa0.71□□□□□ -2.3
PCNPP3-201ENST00000393579 ELOVL7A1L3X0 281 aa0.71□□□□□ -2.3
PCNPP3-201ENST00000393579 PINLYPA6NC86 204 aa0.71□□□□□ -2.3
PCNPP3-201ENST00000393579 LRCOL1A6NCL2 159 aa0.71□□□□□ -2.3
PCNPP3-201ENST00000393579 TAF4O00268 1085 aa0.71□□□□□ -2.3
PCNPP3-201ENST00000393579 PDHXO00330 501 aa0.71□□□□□ -2.3
PCNPP3-201ENST00000393579 PRDM1O75626 825 aa0.71□□□□□ -2.3
PCNPP3-201ENST00000393579 IGHV4-31P0DP07 118 aa0.71□□□□□ -2.3
PCNPP3-201ENST00000393579 NR2C1P13056 603 aa0.71□□□□□ -2.3
PCNPP3-201ENST00000393579 ACHEP22303 614 aa0.71□□□□□ -2.3
PCNPP3-201ENST00000393579 MATKP42679 507 aa0.71□□□□□ -2.3
PCNPP3-201ENST00000393579 IRX4P78413 519 aa0.71□□□□□ -2.3
PCNPP3-201ENST00000393579 CDH18Q13634 790 aa0.71□□□□□ -2.3
PCNPP3-201ENST00000393579 EFR3AQ14156 821 aa0.71□□□□□ -2.3
PCNPP3-201ENST00000393579 TNIP1Q15025 636 aa0.71□□□□□ -2.3
PCNPP3-201ENST00000393579 SPECC1Q5M775 1068 aa0.71□□□□□ -2.3
PCNPP3-201ENST00000393579 KRT39Q6A163 491 aa0.71□□□□□ -2.3
PCNPP3-201ENST00000393579 ZSCAN25Q6NSZ9 544 aa0.71□□□□□ -2.3
PCNPP3-201ENST00000393579 HSCBQ8IWL3 235 aa0.71□□□□□ -2.3
PCNPP3-201ENST00000393579 CPSF7Q8N684 471 aaKnown RBP0.71□□□□□ -2.3
PCNPP3-201ENST00000393579 TPRX1Q8N7U7 411 aa0.71□□□□□ -2.3
PCNPP3-201ENST00000393579 OR52B6Q8NGF0 335 aa0.71□□□□□ -2.3
PCNPP3-201ENST00000393579 OR1L3Q8NH93 324 aa0.71□□□□□ -2.3
PCNPP3-201ENST00000393579 DHX58Q96C10 678 aa0.71□□□□□ -2.3
PCNPP3-201ENST00000393579 KIF1BPQ96EK5 621 aa0.71□□□□□ -2.3
PCNPP3-201ENST00000393579 SPAG5Q96R06 1193 aa0.71□□□□□ -2.3
PCNPP3-201ENST00000393579 TBX15Q96SF7 602 aa0.71□□□□□ -2.3
PCNPP3-201ENST00000393579 LBHD1Q9BQE6 289 aaPredicted RBP0.71□□□□□ -2.3
PCNPP3-201ENST00000393579 INTS2Q9H0H0 1204 aaKnown RBP0.71□□□□□ -2.3
PCNPP3-201ENST00000393579 CPVLQ9H3G5 476 aa0.71□□□□□ -2.3
PCNPP3-201ENST00000393579 SLA2Q9H6Q3 261 aa0.71□□□□□ -2.3
PCNPP3-201ENST00000393579 FGF21Q9NSA1 209 aa0.71□□□□□ -2.3
PCNPP3-201ENST00000393579 OSGIN1Q9UJX0 560 aa0.71□□□□□ -2.3
PCNPP3-201ENST00000393579 TMEM184BQ9Y519 407 aaPredicted RBP0.71□□□□□ -2.3
PCNPP3-201ENST00000393579 ZNF541Q9H0D2 1346 aa0.7□□□□□ -2.3
PCNPP3-201ENST00000393579 IGLV3-16A0A075B6K0 115 aa0.7□□□□□ -2.3
PCNPP3-201ENST00000393579 SERPINE3A8MV23 424 aa0.7□□□□□ -2.3
PCNPP3-201ENST00000393579 G3V2L1 256 aa0.7□□□□□ -2.3
PCNPP3-201ENST00000393579 GAPDHSO14556 408 aaPredicted RBP0.7□□□□□ -2.3
PCNPP3-201ENST00000393579 MAP2K7O14733 419 aa0.7□□□□□ -2.3
PCNPP3-201ENST00000393579 CAND2O75155 1236 aa0.7□□□□□ -2.3
PCNPP3-201ENST00000393579 WISP3O95389 354 aaPredicted RBP0.7□□□□□ -2.3
PCNPP3-201ENST00000393579 TRUB2O95900 331 aaKnown RBP0.7□□□□□ -2.3
PCNPP3-201ENST00000393579 VTNP04004 478 aa0.7□□□□□ -2.3
PCNPP3-201ENST00000393579 NBPF7P0C2Y1 421 aaPredicted RBP0.7□□□□□ -2.3
PCNPP3-201ENST00000393579 TNFAIP3P21580 790 aa0.7□□□□□ -2.3
PCNPP3-201ENST00000393579 RPL34P49207 117 aaKnown RBP0.7□□□□□ -2.3
PCNPP3-201ENST00000393579 NDUFV3P56181 108 aaKnown RBP0.7□□□□□ -2.3
PCNPP3-201ENST00000393579 UFM1P61960 85 aa0.7□□□□□ -2.3
PCNPP3-201ENST00000393579 MVPQ14764 893 aaKnown RBP0.7□□□□□ -2.3
PCNPP3-201ENST00000393579 ZNF74Q16587 644 aa0.7□□□□□ -2.3
PCNPP3-201ENST00000393579 GCNT6Q5T4J0 391 aa0.7□□□□□ -2.3
PCNPP3-201ENST00000393579 AGBL2Q5U5Z8 902 aa0.7□□□□□ -2.3
PCNPP3-201ENST00000393579 ARHGAP12Q8IWW6 846 aa0.7□□□□□ -2.3
PCNPP3-201ENST00000393579 PCYOX1LQ8NBM8 494 aa0.7□□□□□ -2.3
PCNPP3-201ENST00000393579 GTF3C6Q969F1 213 aa0.7□□□□□ -2.3
PCNPP3-201ENST00000393579 RILPL2Q969X0 211 aa0.7□□□□□ -2.3
PCNPP3-201ENST00000393579 NTNG2Q96CW9 530 aa0.7□□□□□ -2.3
PCNPP3-201ENST00000393579 MAGEB18Q96M61 343 aa0.7□□□□□ -2.3
PCNPP3-201ENST00000393579 GFI1Q99684 422 aa0.7□□□□□ -2.3
PCNPP3-201ENST00000393579 CCDC28BQ9BUN5 200 aa0.7□□□□□ -2.3
PCNPP3-201ENST00000393579 ABHD6Q9BV23 337 aa0.7□□□□□ -2.3
PCNPP3-201ENST00000393579 PANK2Q9BZ23 570 aa0.7□□□□□ -2.3
PCNPP3-201ENST00000393579 ASAH2Q9NR71 780 aa0.7□□□□□ -2.3
PCNPP3-201ENST00000393579 RSPH14Q9UHP6 348 aa0.7□□□□□ -2.3
PCNPP3-201ENST00000393579 LNPEPQ9UIQ6 1025 aa0.7□□□□□ -2.3
PCNPP3-201ENST00000393579 ABCG2Q9UNQ0 655 aa0.7□□□□□ -2.3
PCNPP3-201ENST00000393579 K7EQD1 137 aa0.69□□□□□ -2.3
PCNPP3-201ENST00000393579 TSPAN3O60637 253 aa0.69□□□□□ -2.3
PCNPP3-201ENST00000393579 GLRA3O75311 464 aa0.69□□□□□ -2.3
PCNPP3-201ENST00000393579 CDK2AP2O75956 126 aa0.69□□□□□ -2.3
PCNPP3-201ENST00000393579 APBB3O95704 486 aa0.69□□□□□ -2.3
PCNPP3-201ENST00000393579 ACTL6AO96019 429 aa0.69□□□□□ -2.3
PCNPP3-201ENST00000393579 MT-ND1P03886 318 aa0.69□□□□□ -2.3
PCNPP3-201ENST00000393579 COX7A2P14406 83 aa0.69□□□□□ -2.3
PCNPP3-201ENST00000393579 RBMXP38159 391 aaKnown RBP0.69□□□□□ -2.3
PCNPP3-201ENST00000393579 SLC22A6Q4U2R8 563 aa0.69□□□□□ -2.3
PCNPP3-201ENST00000393579 CXorf66Q5JRM2 361 aaPredicted RBP0.69□□□□□ -2.3
PCNPP3-201ENST00000393579 LINC00242Q5T6M2 205 aa0.69□□□□□ -2.3
PCNPP3-201ENST00000393579 GARNL3Q5VVW2 1013 aa0.69□□□□□ -2.3
PCNPP3-201ENST00000393579 JMJD6Q6NYC1 403 aaPredicted RBP0.69□□□□□ -2.3
PCNPP3-201ENST00000393579 PAMR1Q6UXH9 720 aa0.69□□□□□ -2.3
PCNPP3-201ENST00000393579 TMUB2Q71RG4 321 aa0.69□□□□□ -2.3
PCNPP3-201ENST00000393579 GSTA5Q7RTV2 222 aa0.69□□□□□ -2.3
PCNPP3-201ENST00000393579 SPPL2AQ8TCT8 520 aa0.69□□□□□ -2.3
PCNPP3-201ENST00000393579 PHLDA1Q8WV24 401 aaPredicted RBP0.69□□□□□ -2.3
PCNPP3-201ENST00000393579 APOBEC4Q8WW27 367 aaKnown RBP0.69□□□□□ -2.3
PCNPP3-201ENST00000393579 ITLN1Q8WWA0 313 aa0.69□□□□□ -2.3
PCNPP3-201ENST00000393579 MTERF3Q96E29 417 aa0.69□□□□□ -2.3
PCNPP3-201ENST00000393579 COG8Q96MW5 612 aa0.69□□□□□ -2.3
PCNPP3-201ENST00000393579 PHF7Q9BWX1 381 aaPredicted RBP0.69□□□□□ -2.3
PCNPP3-201ENST00000393579 DEFB126Q9BYW3 111 aa0.69□□□□□ -2.3
PCNPP3-201ENST00000393579 OCR1Q9BZK8 76 aa0.69□□□□□ -2.3
PCNPP3-201ENST00000393579 THAP2Q9H0W7 228 aa0.69□□□□□ -2.3
PCNPP3-201ENST00000393579 EPB41L5Q9HCM4 733 aa0.69□□□□□ -2.3
PCNPP3-201ENST00000393579 RASSF1Q9NS23 344 aa0.69□□□□□ -2.3
PCNPP3-201ENST00000393579 HCN3Q9P1Z3 774 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms