RNA–Protein interactions for RNA: ENST00000393561.5

LAMB1-204, Transcript of laminin subunit beta 1, humanhuman

TSL 5 BASIC

Gene LAMB1, Length 5,766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-204ENST00000393561 PITRM1Q5JRX3 1037 aa11.48□□□□□ -0.57
LAMB1-204ENST00000393561 ATP6V1C2Q8NEY4 427 aa11.48□□□□□ -0.57
LAMB1-204ENST00000393561 KAT2AQ92830 837 aa11.48□□□□□ -0.57
LAMB1-204ENST00000393561 FBXL18Q96ME1 805 aa11.48□□□□□ -0.57
LAMB1-204ENST00000393561 MTERF1Q99551 399 aaKnown RBP11.48□□□□□ -0.57
LAMB1-204ENST00000393561 FEM1AQ9BSK4 669 aa11.48□□□□□ -0.57
LAMB1-204ENST00000393561 Q9Y3F1 56 aa11.48□□□□□ -0.57
LAMB1-204ENST00000393561 RPL36Q9Y3U8 105 aaKnown RBP11.48□□□□□ -0.57
LAMB1-204ENST00000393561 DPPA5A6NC42 116 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 MYCLP1P12525 358 aaPredicted RBP11.47□□□□□ -0.57
LAMB1-204ENST00000393561 MPIP34949 423 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 NCBP2P52298 156 aaKnown RBP eCLIP11.47□□□□□ -0.57
LAMB1-204ENST00000393561 PRKCZQ05513 592 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 KCNJ11Q14654 390 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 USP43Q70EL4 1123 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 IFT27Q9BW83 186 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 MED28Q9H204 178 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 EBF3Q9H4W6 596 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 PIGVQ9NUD9 493 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 ANKRD26Q9UPS8 1709 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 ECI2O75521 394 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 RGS20O76081 388 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 NDUFS1P28331 727 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 RPS24P62847 133 aaKnown RBP11.47□□□□□ -0.57
LAMB1-204ENST00000393561 FCHO2Q0JRZ9 810 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 SIRPB2Q5JXA9 342 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 NUP54Q7Z3B4 507 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 GALNT7Q86SF2 657 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 ADGRG6Q86SQ4 1221 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 CHST4Q8NCG5 386 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 ZSCAN5AQ9BUG6 496 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 BCO2Q9BYV7 579 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 TVP23BQ9NYZ1 205 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 ZIM2Q9NZV7 527 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 VPS29Q9UBQ0 182 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 UPB1Q9UBR1 384 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 PCDHGB7Q9Y5F8 929 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 CPSF4LA6NMK7 179 aaKnown RBP11.47□□□□□ -0.57
LAMB1-204ENST00000393561 CA12O43570 354 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 CBSLP0DN79 551 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 MAGP20916 626 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 CBSP35520 551 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 TIE1P35590 1138 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 AP1S2P56377 157 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 TARDBPQ13148 414 aaKnown RBP eCLIP11.47□□□□□ -0.57
LAMB1-204ENST00000393561 SWI5Q1ZZU3 235 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 SPIN4Q56A73 249 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 CWF19L1Q69YN2 538 aaKnown RBP11.47□□□□□ -0.57
LAMB1-204ENST00000393561 FBXL22Q6P050 247 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 ASB9Q96DX5 294 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 CDKN2AIPNLQ96HQ2 116 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 MGME1Q9BQP7 344 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 BHLHE41Q9C0J9 482 aaPredicted RBP11.47□□□□□ -0.57
LAMB1-204ENST00000393561 YIPF1Q9Y548 306 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 WASF2Q9Y6W5 498 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 A8MT66 165 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 C9IYK1 514 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 HAS3O00219 553 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 RBMXL2O75526 392 aaKnown RBP11.47□□□□□ -0.57
LAMB1-204ENST00000393561 SERPINA3P01011 423 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 ALPPL2P10696 532 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 ZNF823P16415 610 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 EFNA1P20827 205 aaPredicted RBP11.47□□□□□ -0.57
LAMB1-204ENST00000393561 WDR4P57081 412 aaKnown RBP11.47□□□□□ -0.57
LAMB1-204ENST00000393561 GJA9P57773 515 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 UBAP2Q5T6F2 1119 aaKnown RBP11.47□□□□□ -0.57
LAMB1-204ENST00000393561 PDE12Q6L8Q7 609 aaKnown RBP11.47□□□□□ -0.57
LAMB1-204ENST00000393561 OR10H4Q8NGA5 316 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 WDR26Q9H7D7 661 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 PTTG2Q9NZH5 202 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 SPATA7Q9P0W8 599 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 ZNF536O15090 1300 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 NOBOXO60393 691 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 NIPSNAP2O75323 286 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 H6PDO95479 791 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 ATP5A1P25705 553 aaKnown RBP11.47□□□□□ -0.57
LAMB1-204ENST00000393561 MAT2AP31153 395 aaKnown RBP11.47□□□□□ -0.57
LAMB1-204ENST00000393561 ARF5P84085 180 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 SH3D19Q5HYK7 790 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 PRR23BQ6ZRT6 265 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 GPR151Q8TDV0 419 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 SLC29A3Q9BZD2 475 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 SLC32A1Q9H598 525 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 PFDN2Q9UHV9 154 aa11.47□□□□□ -0.57
LAMB1-204ENST00000393561 NDRG2Q9UN36 371 aaKnown RBP11.47□□□□□ -0.57
LAMB1-204ENST00000393561 TMA7Q9Y2S6 64 aaKnown RBP11.47□□□□□ -0.57
LAMB1-204ENST00000393561 OR51F1A6NGY5 319 aa11.46□□□□□ -0.57
LAMB1-204ENST00000393561 AGR2O95994 175 aa11.46□□□□□ -0.57
LAMB1-204ENST00000393561 GNALP38405 381 aa11.46□□□□□ -0.57
LAMB1-204ENST00000393561 CLCN7P51798 805 aa11.46□□□□□ -0.57
LAMB1-204ENST00000393561 DAG1Q14118 895 aa11.46□□□□□ -0.57
LAMB1-204ENST00000393561 SLBPQ14493 270 aaKnown RBP eCLIP11.46□□□□□ -0.57
LAMB1-204ENST00000393561 IQCCQ4KMZ1 466 aa11.46□□□□□ -0.57
LAMB1-204ENST00000393561 DCAF12L1Q5VU92 463 aa11.46□□□□□ -0.57
LAMB1-204ENST00000393561 TNFAIP8L2Q6P589 184 aaPredicted RBP11.46□□□□□ -0.57
LAMB1-204ENST00000393561 BRAT1Q6PJG6 821 aa11.46□□□□□ -0.57
LAMB1-204ENST00000393561 PACRGLQ8N7B6 248 aa11.46□□□□□ -0.57
LAMB1-204ENST00000393561 CEP295NLQ96MC4 621 aa11.46□□□□□ -0.57
LAMB1-204ENST00000393561 POLR2J3Q9H1A7 115 aaKnown RBP11.46□□□□□ -0.57
LAMB1-204ENST00000393561 SP140LQ9H930 580 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms