RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 ANKRD61A6NGH8 418 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 LRRIQ3A6PVS8 624 aaPredicted RBP3.47□□□□□ -1.85
XRN1-202ENST00000392981 ZNF879B4DU55 563 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 TMEM189-UBE2V1I3L0A0 370 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 HIP1O00291 1037 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 SLC16A3O15427 465 aaKnown RBP3.47□□□□□ -1.85
XRN1-202ENST00000392981 TMPRSS11DO60235 418 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 BAG3O95817 575 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 SLC16A8O95907 504 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 C1RP00736 705 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 EGFP01133 1207 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 GH2P01242 217 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 PGK2P07205 417 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 GLI4P10075 376 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 CETPP11597 493 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 KHKP50053 298 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 RGS8P57771 180 aaPredicted RBP3.47□□□□□ -1.85
XRN1-202ENST00000392981 CRHR2Q13324 411 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 UBE2V1Q13404 147 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 NR1I3Q14994 352 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 TRIP10Q15642 601 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 PRAMEF19Q5SWL8 479 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 PM20D1Q6GTS8 502 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 DPY19L4Q7Z388 723 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 TSPAN33Q86UF1 283 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 ZBTB2Q8N680 514 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 ZNF398Q8TD17 642 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 DAZAP1Q96EP5 407 aaKnown RBP3.47□□□□□ -1.85
XRN1-202ENST00000392981 PXMP2Q9NR77 195 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 EXTL2Q9UBQ6 330 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 PCDHA12Q9UN75 941 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 REXO2Q9Y3B8 237 aaKnown RBP3.47□□□□□ -1.85
XRN1-202ENST00000392981 DISP1Q96F81 1524 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 TERTO14746 1132 aaKnown RBP3.47□□□□□ -1.85
XRN1-202ENST00000392981 PPP1R2P9O14990 202 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 EXTL3O43909 919 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 MFAP3LO75121 409 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 KAT7O95251 611 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 TGM6O95932 706 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 ONECUT2O95948 504 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 FSTP19883 344 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 HMOX2P30519 316 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 CD97P48960 835 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 CCR4P51679 360 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 EFNA5P52803 228 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 PSMD4P55036 377 aaKnown RBP3.47□□□□□ -1.85
XRN1-202ENST00000392981 HADHBP55084 474 aaKnown RBP3.47□□□□□ -1.85
XRN1-202ENST00000392981 MRPL49Q13405 166 aaKnown RBP3.47□□□□□ -1.85
XRN1-202ENST00000392981 OLIG2Q13516 323 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 HIST2H2BCQ6DN03 193 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 HIST2H2BDQ6DRA6 164 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 GJB7Q6PEY0 223 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 USP30Q70CQ3 517 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 ZNF605Q86T29 641 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 ACOT1Q86TX2 421 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 STX12Q86Y82 276 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 LRRC17Q8N6Y2 441 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 TMEM217Q8N7C4 229 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 ATP8B4Q8TF62 1192 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 PTPMT1Q8WUK0 201 aaPredicted RBP3.47□□□□□ -1.85
XRN1-202ENST00000392981 MCUR1Q96AQ8 359 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 CHFRQ96EP1 664 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 SENP8Q96LD8 212 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 KXD1Q9BQD3 176 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 MXRA8Q9BRK3 442 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 WDR83Q9BRX9 315 aaKnown RBP3.47□□□□□ -1.85
XRN1-202ENST00000392981 OR10A2Q9H208 303 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 WDR76Q9H967 626 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 GDE1Q9NZC3 331 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 B3GALT5Q9Y2C3 310 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 CEPT1Q9Y6K0 416 aa3.47□□□□□ -1.85
XRN1-202ENST00000392981 NSD2O96028 1365 aa3.46□□□□□ -1.85
XRN1-202ENST00000392981 ADCY10Q96PN6 1610 aa3.46□□□□□ -1.85
XRN1-202ENST00000392981 A0A087WUV0 522 aaPredicted RBP3.46□□□□□ -1.86
XRN1-202ENST00000392981 NPIPA5A0A0B4J1W7 369 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 NPIPA5E9PKD4 350 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 NPIPA3F8WFD2 350 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 OGTO15294 1046 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 BBOX1O75936 387 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 KRT36O76013 467 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 MFN2O95140 757 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 VSIG10L2P0DP72 767 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 NID1P14543 1247 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 CD40LGP29965 261 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 GPR143P51810 404 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 NLRP11P59045 1033 aaKnown RBP3.46□□□□□ -1.86
XRN1-202ENST00000392981 TLE3Q04726 772 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 TP53BP2Q13625 1128 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 ZMAT1Q5H9K5 638 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 ZNF704Q6ZNC4 412 aaPredicted RBP3.46□□□□□ -1.86
XRN1-202ENST00000392981 C10orf67Q8IYJ2 551 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 OR9K2Q8NGE7 335 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 LRRC8CQ8TDW0 803 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 CA5BP1Q8WTZ4 195 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 OVCA2Q8WZ82 227 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 PRMT6Q96LA8 375 aaPredicted RBP3.46□□□□□ -1.86
XRN1-202ENST00000392981 INPP4AQ96PE3 977 aaPredicted RBP3.46□□□□□ -1.86
XRN1-202ENST00000392981 FIZ1Q96SL8 496 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 URM1Q9BTM9 101 aaKnown RBP3.46□□□□□ -1.86
XRN1-202ENST00000392981 PRMT8Q9NR22 394 aaPredicted RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms