RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 ZNF224Q9NZL3 707 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 C9IYK1 514 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 FGF19O95750 216 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 DLDP09622 509 aaKnown RBP12.87□□□□□ -0.35
LCA5-202ENST00000392959 TFPIP10646 304 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 RORCP51449 518 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 CLCN4P51793 760 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 GJA9P57773 515 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 TMEM44Q2T9K0 475 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 SFT2D3Q587I9 215 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 ZFP3Q96NJ6 502 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 CDADC1Q9BWV3 514 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 OSER1Q9NX31 292 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 MALT1Q9UDY8 824 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 PTBP2Q9UKA9 531 aaKnown RBP12.87□□□□□ -0.35
LCA5-202ENST00000392959 A0A1W2PRB8 838 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 TYROBPO43914 113 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 PCDH7O60245 1069 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 KRT33AO76009 404 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 VIPP01282 170 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 S100A6P06703 90 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 SLC6A4P31645 630 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 HOXD13P35453 343 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 ZNF155Q12901 538 aaPredicted RBP12.87□□□□□ -0.35
LCA5-202ENST00000392959 OR2T5Q6IEZ7 315 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 ANKRD23Q86SG2 305 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 OR10H4Q8NGA5 316 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 OR2T29Q8NH02 315 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 OR4C6Q8NH72 309 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 SLC35F5Q8WV83 523 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 RNF31Q96EP0 1072 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 C12orf42Q96LP6 360 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 ZNF599Q96NL3 588 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 SPIN1Q9Y657 262 aaPredicted RBP12.87□□□□□ -0.35
LCA5-202ENST00000392959 KAT6AQ92794 2004 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 ACOX3O15254 700 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 EPHX1P07099 455 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 CMPK1P30085 196 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 PLA2G16P53816 162 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 GSCP56915 257 aaPredicted RBP12.87□□□□□ -0.35
LCA5-202ENST00000392959 OR2B6P58173 313 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 ADNP2Q6IQ32 1131 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 SLC39A4Q6P5W5 647 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 POMZP3Q6PJE2 187 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 LGI4Q8N135 537 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 MTMR14Q8NCE2 650 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 TSEN15Q8WW01 171 aaKnown RBP12.87□□□□□ -0.35
LCA5-202ENST00000392959 CTPS2Q9NRF8 586 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 TRBV23OR9-2A0A075B6M9 112 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 A0A0X1KG70 313 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 A0A1W2PP18 115 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 PDPK1O15530 556 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 LDOC1O95751 146 aaPredicted RBP12.86□□□□□ -0.35
LCA5-202ENST00000392959 SLC35G6P0C7Q6 338 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 IL7RP16871 459 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 TUBA4AP68366 448 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 PCLAFQ15004 111 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 RBM20Q5T481 1227 aaKnown RBP12.86□□□□□ -0.35
LCA5-202ENST00000392959 SMARCD3Q6STE5 483 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 PRR23BQ6ZRT6 265 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 GPR135Q8IZ08 494 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 PIGKQ92643 395 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 GPER1Q99527 375 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 MIR1-1HGQ9H1L0 117 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 FLRT1Q9NZU1 646 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 SIRPGQ9P1W8 387 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 VPS29Q9UBQ0 182 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 J3QRK9 145 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 DNAJB1P25685 340 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 CSTF2P33240 577 aaKnown RBP eCLIP12.86□□□□□ -0.35
LCA5-202ENST00000392959 CRB2Q5IJ48 1285 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 UBAP2Q5T6F2 1119 aaKnown RBP12.86□□□□□ -0.35
LCA5-202ENST00000392959 GALNT13Q8IUC8 556 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 ENDOVQ8N8Q3 282 aaKnown RBP12.86□□□□□ -0.35
LCA5-202ENST00000392959 FAM110BQ8TC76 370 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 FBXL8Q96CD0 374 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 BCO2Q9BYV7 579 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 TRIM2Q9C040 744 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 ZCCHC3Q9NUD5 404 aaKnown RBP12.86□□□□□ -0.35
LCA5-202ENST00000392959 COLEC10Q9Y6Z7 277 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 GIMD1P0DJR0 217 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 ITGA3P26006 1051 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 SWI5Q1ZZU3 235 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 PDCD4Q53EL6 469 aaKnown RBP12.86□□□□□ -0.35
LCA5-202ENST00000392959 UBXN11Q5T124 520 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 PLPP4Q5VZY2 271 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 FBXL22Q6P050 247 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 MIPEPQ99797 713 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 SLC2A6Q9UGQ3 507 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 SLC38A8A6NNN8 435 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 HAS3O00219 553 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 PRODHO43272 600 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 TBX18O95935 607 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 CRISP3P54108 245 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 GANABQ14697 944 aaKnown RBP12.86□□□□□ -0.35
LCA5-202ENST00000392959 SIRPB2Q5JXA9 342 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 KCTD13Q8WZ19 329 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 MARCH7Q9H992 704 aa12.86□□□□□ -0.35
LCA5-202ENST00000392959 PAK6Q9NQU5 681 aaPredicted RBP12.86□□□□□ -0.35
LCA5-202ENST00000392959 TBC1D24Q9ULP9 559 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms