RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 S1PR5Q9H228 398 aa3.19□□□□□ -1.9
SNORA40.3-201ENST00000390964 P2RY12Q9H244 342 aa3.19□□□□□ -1.9
SNORA40.3-201ENST00000390964 CPVLQ9H3G5 476 aa3.19□□□□□ -1.9
SNORA40.3-201ENST00000390964 SERINC1Q9NRX5 453 aa3.19□□□□□ -1.9
SNORA40.3-201ENST00000390964 RNF186Q9NXI6 227 aa3.19□□□□□ -1.9
SNORA40.3-201ENST00000390964 B3GAT1Q9P2W7 334 aa3.19□□□□□ -1.9
SNORA40.3-201ENST00000390964 LRWD1Q9UFC0 647 aa3.19□□□□□ -1.9
SNORA40.3-201ENST00000390964 COL2A1P02458 1487 aaPredicted RBP3.19□□□□□ -1.9
SNORA40.3-201ENST00000390964 NOTCH3Q9UM47 2321 aa3.19□□□□□ -1.9
SNORA40.3-201ENST00000390964 ANKRD61A6NGH8 418 aa3.18□□□□□ -1.9
SNORA40.3-201ENST00000390964 MSGN1A6NI15 193 aa3.18□□□□□ -1.9
SNORA40.3-201ENST00000390964 GLOD5A6NK44 160 aa3.18□□□□□ -1.9
SNORA40.3-201ENST00000390964 H7C423 109 aa3.18□□□□□ -1.9
SNORA40.3-201ENST00000390964 IPO8O15397 1037 aaKnown RBP3.18□□□□□ -1.9
SNORA40.3-201ENST00000390964 GPIP06744 558 aa3.18□□□□□ -1.9
SNORA40.3-201ENST00000390964 DANCRP0C864 163 aa3.18□□□□□ -1.9
SNORA40.3-201ENST00000390964 IGHV4-31P0DP07 118 aa3.18□□□□□ -1.9
SNORA40.3-201ENST00000390964 EIF2DP41214 584 aaKnown RBP3.18□□□□□ -1.9
SNORA40.3-201ENST00000390964 MAZP56270 477 aaKnown RBP3.18□□□□□ -1.9
SNORA40.3-201ENST00000390964 PSMC6P62333 389 aa3.18□□□□□ -1.9
SNORA40.3-201ENST00000390964 SP3Q02447 781 aa3.18□□□□□ -1.9
SNORA40.3-201ENST00000390964 PDLIM3Q53GG5 364 aaPredicted RBP3.18□□□□□ -1.9
SNORA40.3-201ENST00000390964 ELFN2Q5R3F8 820 aa3.18□□□□□ -1.9
SNORA40.3-201ENST00000390964 C20orf194Q5TEA3 1177 aa3.18□□□□□ -1.9
SNORA40.3-201ENST00000390964 TRIM65Q6PJ69 517 aa3.18□□□□□ -1.9
SNORA40.3-201ENST00000390964 Q6ZSR9 355 aa3.18□□□□□ -1.9
SNORA40.3-201ENST00000390964 STXBP4Q6ZWJ1 553 aa3.18□□□□□ -1.9
SNORA40.3-201ENST00000390964 TMEM139Q8IV31 216 aa3.18□□□□□ -1.9
SNORA40.3-201ENST00000390964 LINC00346Q8IVM7 164 aa3.18□□□□□ -1.9
SNORA40.3-201ENST00000390964 OR4C3Q8NH37 302 aa3.18□□□□□ -1.9
SNORA40.3-201ENST00000390964 SLAMF9Q96A28 289 aa3.18□□□□□ -1.9
SNORA40.3-201ENST00000390964 OLFM1Q99784 485 aa3.18□□□□□ -1.9
SNORA40.3-201ENST00000390964 TRIM51Q9BSJ1 452 aa3.18□□□□□ -1.9
SNORA40.3-201ENST00000390964 NUP85Q9BW27 656 aa3.18□□□□□ -1.9
SNORA40.3-201ENST00000390964 EQTNQ9NQ60 294 aa3.18□□□□□ -1.9
SNORA40.3-201ENST00000390964 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.18□□□□□ -1.9
SNORA40.3-201ENST00000390964 GDE1Q9NZC3 331 aa3.18□□□□□ -1.9
SNORA40.3-201ENST00000390964 MRPL15Q9P015 296 aaKnown RBP3.18□□□□□ -1.9
SNORA40.3-201ENST00000390964 STK26Q9P289 416 aa3.18□□□□□ -1.9
SNORA40.3-201ENST00000390964 CACNG4Q9UBN1 327 aa3.18□□□□□ -1.9
SNORA40.3-201ENST00000390964 GRID1Q9ULK0 1009 aa3.18□□□□□ -1.9
SNORA40.3-201ENST00000390964 TRIM17Q9Y577 477 aa3.18□□□□□ -1.9
SNORA40.3-201ENST00000390964 PCDH11YQ9BZA8 1340 aa3.18□□□□□ -1.9
SNORA40.3-201ENST00000390964 A0A0J9YWU9 116 aa3.17□□□□□ -1.9
SNORA40.3-201ENST00000390964 FEZF1A0PJY2 475 aa3.17□□□□□ -1.9
SNORA40.3-201ENST00000390964 CASP2P42575 452 aa3.17□□□□□ -1.9
SNORA40.3-201ENST00000390964 MATR3P43243 847 aaKnown RBP eCLIP3.17□□□□□ -1.9
SNORA40.3-201ENST00000390964 SLC6A12P48065 614 aa3.17□□□□□ -1.9
SNORA40.3-201ENST00000390964 CBWD6Q4V339 395 aa3.17□□□□□ -1.9
SNORA40.3-201ENST00000390964 CBWD3Q5JTY5 395 aa3.17□□□□□ -1.9
SNORA40.3-201ENST00000390964 TMEM211Q6ICI0 200 aa3.17□□□□□ -1.9
SNORA40.3-201ENST00000390964 ZNF613Q6PF04 617 aa3.17□□□□□ -1.9
SNORA40.3-201ENST00000390964 METTL7BQ6UX53 244 aa3.17□□□□□ -1.9
SNORA40.3-201ENST00000390964 BRINP3Q76B58 766 aa3.17□□□□□ -1.9
SNORA40.3-201ENST00000390964 ZNF440Q8IYI8 595 aa3.17□□□□□ -1.9
SNORA40.3-201ENST00000390964 NIPA2Q8N8Q9 360 aa3.17□□□□□ -1.9
SNORA40.3-201ENST00000390964 APPL2Q8NEU8 664 aa3.17□□□□□ -1.9
SNORA40.3-201ENST00000390964 DBF4BQ8NFT6 615 aa3.17□□□□□ -1.9
SNORA40.3-201ENST00000390964 KBTBD8Q8NFY9 601 aa3.17□□□□□ -1.9
SNORA40.3-201ENST00000390964 OR5AP2Q8NGF4 316 aa3.17□□□□□ -1.9
SNORA40.3-201ENST00000390964 OR52N5Q8NH56 324 aa3.17□□□□□ -1.9
SNORA40.3-201ENST00000390964 ZNF689Q96CS4 500 aaPredicted RBP3.17□□□□□ -1.9
SNORA40.3-201ENST00000390964 TMCO6Q96DC7 493 aa3.17□□□□□ -1.9
SNORA40.3-201ENST00000390964 SPACA9Q96E40 222 aaPredicted RBP3.17□□□□□ -1.9
SNORA40.3-201ENST00000390964 RAD9AQ99638 391 aa3.17□□□□□ -1.9
SNORA40.3-201ENST00000390964 SYT15Q9BQS2 421 aa3.17□□□□□ -1.9
SNORA40.3-201ENST00000390964 SYT11Q9BT88 431 aa3.17□□□□□ -1.9
SNORA40.3-201ENST00000390964 FUCA2Q9BTY2 467 aa3.17□□□□□ -1.9
SNORA40.3-201ENST00000390964 TRIM15Q9C019 465 aa3.17□□□□□ -1.9
SNORA40.3-201ENST00000390964 UBA5Q9GZZ9 404 aa3.17□□□□□ -1.9
SNORA40.3-201ENST00000390964 MIS12Q9H081 205 aa3.17□□□□□ -1.9
SNORA40.3-201ENST00000390964 TBC1D17Q9HA65 648 aa3.17□□□□□ -1.9
SNORA40.3-201ENST00000390964 PDE7BQ9NP56 450 aa3.17□□□□□ -1.9
SNORA40.3-201ENST00000390964 SLC35C2Q9NQQ7 365 aa3.17□□□□□ -1.9
SNORA40.3-201ENST00000390964 DPP3Q9NY33 737 aa3.17□□□□□ -1.9
SNORA40.3-201ENST00000390964 CRNNQ9UBG3 495 aaPredicted RBP3.17□□□□□ -1.9
SNORA40.3-201ENST00000390964 PCDHGB4Q9UN71 923 aa3.17□□□□□ -1.9
SNORA40.3-201ENST00000390964 IGKV3D-20A0A0C4DH25 116 aa3.16□□□□□ -1.9
SNORA40.3-201ENST00000390964 TOMM70O94826 608 aa3.16□□□□□ -1.9
SNORA40.3-201ENST00000390964 PGM3O95394 542 aa3.16□□□□□ -1.9
SNORA40.3-201ENST00000390964 HSPA8P11142 646 aaKnown RBP3.16□□□□□ -1.9
SNORA40.3-201ENST00000390964 NKX2-1P43699 371 aaPredicted RBP3.16□□□□□ -1.9
SNORA40.3-201ENST00000390964 CDH13P55290 713 aa3.16□□□□□ -1.9
SNORA40.3-201ENST00000390964 PRKG2Q13237 762 aa3.16□□□□□ -1.9
SNORA40.3-201ENST00000390964 ODF4Q2M2E3 257 aa3.16□□□□□ -1.9
SNORA40.3-201ENST00000390964 SGSM1Q2NKQ1 1148 aa3.16□□□□□ -1.9
SNORA40.3-201ENST00000390964 PHLDA2Q53GA4 152 aa3.16□□□□□ -1.9
SNORA40.3-201ENST00000390964 KLHL26Q53HC5 615 aa3.16□□□□□ -1.9
SNORA40.3-201ENST00000390964 GTSCR1Q86UQ5 136 aa3.16□□□□□ -1.9
SNORA40.3-201ENST00000390964 DNAAF5Q86Y56 855 aa3.16□□□□□ -1.9
SNORA40.3-201ENST00000390964 KIRREL3Q8IZU9 778 aa3.16□□□□□ -1.9
SNORA40.3-201ENST00000390964 RAB42Q8N4Z0 105 aa3.16□□□□□ -1.9
SNORA40.3-201ENST00000390964 DCLK2Q8N568 766 aa3.16□□□□□ -1.9
SNORA40.3-201ENST00000390964 SYT2Q8N9I0 419 aaPredicted RBP3.16□□□□□ -1.9
SNORA40.3-201ENST00000390964 TSPAN14Q8NG11 270 aa3.16□□□□□ -1.9
SNORA40.3-201ENST00000390964 SSMEM1Q8WWF3 244 aa3.16□□□□□ -1.9
SNORA40.3-201ENST00000390964 KRT12Q99456 494 aa3.16□□□□□ -1.9
SNORA40.3-201ENST00000390964 CHMP4AQ9BY43 222 aa3.16□□□□□ -1.9
SNORA40.3-201ENST00000390964 FGFBP2Q9BYJ0 223 aa3.16□□□□□ -1.9
SNORA40.3-201ENST00000390964 OPA3Q9H6K4 179 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms