RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 MRPS12O15235 138 aaKnown RBP-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 NKX2-8O15522 239 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 SPINT2O43291 252 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 HTRA2O43464 458 aaPredicted RBP-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 TMCC2O75069 709 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 ATP2C2O75185 946 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 ULK1O75385 1050 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 SPAG7O75391 227 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 SERF1AO75920 110 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 NXPH4O95158 308 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 CDRT1O95170 752 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 OR6A2O95222 327 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 FKBP9O95302 570 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 SEC24AO95486 1093 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 SPINK1P00995 79 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 FTLP02792 175 aaPredicted RBP-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 MMP1P03956 469 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 VTNP04004 478 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 TFAP2AP05549 437 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 IGKV5-2P06315 115 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 LIPFP07098 398 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 CYP3A4P08684 503 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 POLR2MP0CAP2 368 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 PPIAL4FP0DN26 164 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 THRBP10828 461 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 IRF1P10914 325 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 ADRB3P13945 408 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 IL1R1P14778 569 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 CBR1P16152 277 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 PECAM1P16284 738 aaPredicted RBP-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 HOXB9P17482 250 aaPredicted RBP-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 TPH1P17752 444 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 ADRA2CP18825 462 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 UGT1A6P19224 532 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 AOC1P19801 751 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 EFNA1P20827 205 aaPredicted RBP-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 CYP3A7P24462 503 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 ACAT1P24752 427 aaKnown RBP-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 BDKRB2P30411 391 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 PKLRP30613 574 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 BTCP35070 178 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 GJC1P36383 396 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 ACVR1BP36896 505 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 ADCYAP1R1P41586 468 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 TECP42680 631 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 GPD2P43304 727 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 BRCC3P46736 316 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 CENPAP49450 140 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 SLC26A2P50443 739 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 CCR3P51677 355 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 NEK4P51957 841 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 NDST2P52849 883 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 PDX1P52945 283 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 SCAND1P57086 179 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 FAM193AP78312 1265 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 CXCL6P80162 114 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 COG7P83436 770 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 FANCCQ00597 558 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 DHODHQ02127 395 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 PRKCZQ05513 592 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 KLHL30Q0D2K2 578 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 GPS1Q13098 491 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 PRDX4Q13162 271 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 RASGRF1Q13972 1273 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 CYLC2Q14093 348 aaPredicted RBP-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 FGL2Q14314 439 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 SLC29A2Q14542 456 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 DHX8Q14562 1220 aaKnown RBP-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 IHHQ14623 411 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 HERPUD1Q15011 391 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 ARHGEF6Q15052 776 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 SIX1Q15475 284 aaPredicted RBP-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 NTRK2Q16620 822 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 KYAT1Q16773 422 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 TMEM44Q2T9K0 475 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 PLEKHG6Q3KR16 790 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 ZNF528Q3MIS6 628 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 C3orf36Q3SXR2 165 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 MMEL1Q495T6 779 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 GXYLT1Q4G148 440 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 COBLL1Q53SF7 1204 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 TMEM196Q5HYL7 178 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 KHDC1LQ5JSQ8 128 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 FBXO47Q5MNV8 452 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 SERTAD4-AS1Q5TG53 156 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 MANEALQ5VSG8 457 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 ZNF57Q68EA5 555 aaPredicted RBP-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 KLC3Q6P597 504 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 TLDC1Q6P9B6 456 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 CCDC174Q6PII3 467 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 BRAT1Q6PJG6 821 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 KLHL17Q6TDP4 642 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 C16orf89Q6UX73 402 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 ZDHHC24Q6UX98 284 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 C2orf66Q6UXQ4 117 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 UNC5DQ6UXZ4 953 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 ZNF783Q6ZMS7 281 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 C3P1Q6ZMU1 363 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 SHISA6Q6ZSJ9 500 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 SLC24A5Q71RS6 500 aa-0.4□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms