RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 FASTKD5Q7L8L6 764 aaKnown RBP-0.97□□□□□ -2.56
RNU6-540P-201ENST00000384622 PIGZQ86VD9 579 aa-0.97□□□□□ -2.56
RNU6-540P-201ENST00000384622 WDR75Q8IWA0 830 aaKnown RBP-0.97□□□□□ -2.56
RNU6-540P-201ENST00000384622 OR4N4Q8N0Y3 316 aa-0.97□□□□□ -2.56
RNU6-540P-201ENST00000384622 MARVELD2Q8N4S9 558 aa-0.97□□□□□ -2.56
RNU6-540P-201ENST00000384622 DNAJC22Q8N4W6 341 aa-0.97□□□□□ -2.56
RNU6-540P-201ENST00000384622 ARRDC1Q8N5I2 433 aa-0.97□□□□□ -2.56
RNU6-540P-201ENST00000384622 LINC01555Q8NAE3 123 aa-0.97□□□□□ -2.56
RNU6-540P-201ENST00000384622 MAPK15Q8TD08 544 aa-0.97□□□□□ -2.56
RNU6-540P-201ENST00000384622 HSD17B8Q92506 261 aa-0.97□□□□□ -2.56
RNU6-540P-201ENST00000384622 NMD3Q96D46 503 aaKnown RBP-0.97□□□□□ -2.56
RNU6-540P-201ENST00000384622 SERINC2Q96SA4 455 aa-0.97□□□□□ -2.56
RNU6-540P-201ENST00000384622 GFI1Q99684 422 aa-0.97□□□□□ -2.56
RNU6-540P-201ENST00000384622 RBM24Q9BX46 236 aaKnown RBP-0.97□□□□□ -2.56
RNU6-540P-201ENST00000384622 C16orf95Q9H693 158 aa-0.97□□□□□ -2.56
RNU6-540P-201ENST00000384622 HEYLQ9NQ87 328 aaPredicted RBP-0.97□□□□□ -2.56
RNU6-540P-201ENST00000384622 STK32BQ9NY57 414 aa-0.97□□□□□ -2.56
RNU6-540P-201ENST00000384622 UPB1Q9UBR1 384 aa-0.97□□□□□ -2.56
RNU6-540P-201ENST00000384622 ZNF212Q9UDV6 495 aa-0.97□□□□□ -2.56
RNU6-540P-201ENST00000384622 ZNF337Q9Y3M9 751 aa-0.97□□□□□ -2.56
RNU6-540P-201ENST00000384622 U3KQA8 63 aa-0.97□□□□□ -2.56
RNU6-540P-201ENST00000384622 ROS1P08922 2347 aa-0.97□□□□□ -2.56
RNU6-540P-201ENST00000384622 TRRAPQ9Y4A5 3859 aa-0.97□□□□□ -2.56
RNU6-540P-201ENST00000384622 LAMC3Q9Y6N6 1575 aa-0.97□□□□□ -2.56
RNU6-540P-201ENST00000384622 USP19O94966 1318 aa-0.97□□□□□ -2.57
RNU6-540P-201ENST00000384622 KIAA1217Q5T5P2 1943 aa-0.97□□□□□ -2.57
RNU6-540P-201ENST00000384622 RPRD2Q5VT52 1461 aaKnown RBP-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 NEURL4Q96JN8 1562 aa-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 IGKV1D-37A0A075B6S9 117 aa-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 A0A087X0B3 334 aa-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 OR6C76A6NM76 312 aa-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 HCRTO43612 131 aa-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 SCO2O43819 266 aa-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 GPR137BO60478 399 aa-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 UBXN7O94888 489 aa-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 SCELO95171 688 aa-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 VIPP01282 170 aa-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 LIPFP07098 398 aa-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 QDPRP09417 244 aa-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 EPHA8P29322 1005 aaPredicted RBP-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 CCR5P51681 352 aa-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 RAD23BP54727 409 aa-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 DCDC1P59894 354 aa-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 RPS16P62249 146 aaKnown RBP-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 PRPF4BQ13523 1007 aaKnown RBP-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 KIAA0040Q15053 153 aa-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 MPPED2Q15777 294 aa-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 ME3Q16798 604 aa-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 USP41Q3LFD5 358 aa-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 RABL6Q3YEC7 729 aaPredicted RBP-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 GXYLT1Q4G148 440 aa-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 OTPQ5XKR4 325 aa-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 KLHL17Q6TDP4 642 aa-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 ZFP2Q6ZN57 461 aa-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 Q6ZRN7 208 aaPredicted RBP-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 PLPPR4Q7Z2D5 763 aa-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 GPR180Q86V85 440 aa-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 SPICE1Q8N0Z3 855 aa-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 ANKRD13CQ8N6S4 541 aa-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 ZNF709Q8N972 641 aa-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 OR4Q3Q8NH05 313 aa-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 VANGL1Q8TAA9 524 aaPredicted RBP-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 HMGCLL1Q8TB92 370 aa-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 KIAA1524Q8TCG1 905 aa-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 KCNJ9Q92806 393 aa-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 MCRS1Q96EZ8 462 aa-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 RIPOR3Q96MK2 946 aa-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 DGAT2Q96PD7 388 aa-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 STACQ99469 402 aa-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 ZMAT3Q9HA38 289 aaKnown RBP-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 NLKQ9UBE8 527 aa-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 RSPH14Q9UHP6 348 aa-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 PSORS1C2Q9UIG4 136 aa-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 KLHDC2Q9Y2U9 406 aa-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 C5orf42Q9H799 3197 aa-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 SMG6Q86US8 1419 aaKnown RBP-0.98□□□□□ -2.57
RNU6-540P-201ENST00000384622 VCANP13611 3396 aa-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 CACNA1SQ13698 1873 aa-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 IGKV1-27A0A075B6S5 117 aa-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 IGKV1D-13A0A0B4J2D9 117 aa-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 GSAPA4D1B5 854 aa-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 ZFP92A6NM28 416 aa-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 TEX46H3BTG2 121 aa-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 ATP6V0E1O15342 81 aa-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 ADAM20O43506 726 aa-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 ICOSLGO75144 302 aa-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 CTAG2O75638 210 aa-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 IGKV1-13P0DP09 117 aa-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 MYCLP1P12525 358 aaPredicted RBP-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 SRD5A1P18405 259 aa-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 OPRD1P41143 372 aa-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 MATKP42679 507 aa-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 PRELPP51888 382 aa-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 PRMT2P55345 433 aa-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 ITPK1Q13572 414 aa-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 PRSS8Q16651 343 aa-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 GSG1Q2KHT4 349 aa-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 VWC2Q2TAL6 325 aa-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 TKFCQ3LXA3 575 aa-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 SPRNQ5BIV9 151 aa-0.99□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms