RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 HMGCS1Q01581 520 aa20.74■□□□□ 0.91
SKI-201ENST00000378536 MTAPQ13126 283 aa20.74■□□□□ 0.91
SKI-201ENST00000378536 PTCHD3Q3KNS1 767 aa20.74■□□□□ 0.91
SKI-201ENST00000378536 PAQR9Q6ZVX9 377 aa20.74■□□□□ 0.91
SKI-201ENST00000378536 RNF44Q7L0R7 432 aa20.74■□□□□ 0.91
SKI-201ENST00000378536 LPGAT1Q92604 370 aa20.74■□□□□ 0.91
SKI-201ENST00000378536 ZFRQ96KR1 1074 aaKnown RBP20.74■□□□□ 0.91
SKI-201ENST00000378536 ZDHHC2Q9UIJ5 367 aa20.74■□□□□ 0.91
SKI-201ENST00000378536 LYVE1Q9Y5Y7 322 aa20.74■□□□□ 0.91
SKI-201ENST00000378536 PIAS3Q9Y6X2 628 aa20.74■□□□□ 0.91
SKI-201ENST00000378536 TGFB1P01137 390 aa20.74■□□□□ 0.91
SKI-201ENST00000378536 ZNF37AP17032 561 aaPredicted RBP20.74■□□□□ 0.91
SKI-201ENST00000378536 TOP3AQ13472 1001 aaPredicted RBP20.74■□□□□ 0.91
SKI-201ENST00000378536 EPHX4Q8IUS5 362 aa20.74■□□□□ 0.91
SKI-201ENST00000378536 OR4F6Q8NGB9 312 aa20.74■□□□□ 0.91
SKI-201ENST00000378536 FAM83CQ9BQN1 747 aa20.74■□□□□ 0.91
SKI-201ENST00000378536 MOCS1Q9NZB8 636 aa20.74■□□□□ 0.91
SKI-201ENST00000378536 CHRM1P11229 460 aaPredicted RBP20.74■□□□□ 0.91
SKI-201ENST00000378536 GSTM5P46439 218 aa20.74■□□□□ 0.91
SKI-201ENST00000378536 NR1D2Q14995 579 aa20.74■□□□□ 0.91
SKI-201ENST00000378536 PCLAFQ15004 111 aa20.74■□□□□ 0.91
SKI-201ENST00000378536 AKTIPQ9H8T0 292 aa20.74■□□□□ 0.91
SKI-201ENST00000378536 LY75O60449 1722 aa20.73■□□□□ 0.91
SKI-201ENST00000378536 DRGXA6NNA5 263 aa20.73■□□□□ 0.91
SKI-201ENST00000378536 RGS5O15539 181 aa20.73■□□□□ 0.91
SKI-201ENST00000378536 OAS1P00973 400 aaKnown RBP20.73■□□□□ 0.91
SKI-201ENST00000378536 GDF5P43026 501 aa20.73■□□□□ 0.91
SKI-201ENST00000378536 CREB5Q02930 508 aa20.73■□□□□ 0.91
SKI-201ENST00000378536 FAAH2Q6GMR7 532 aa20.73■□□□□ 0.91
SKI-201ENST00000378536 DEFB119Q8N690 84 aa20.73■□□□□ 0.91
SKI-201ENST00000378536 DNAJB8Q8NHS0 232 aa20.73■□□□□ 0.91
SKI-201ENST00000378536 SLC38A2Q96QD8 506 aa20.73■□□□□ 0.91
SKI-201ENST00000378536 SRCP12931 536 aa20.73■□□□□ 0.91
SKI-201ENST00000378536 NEDD8Q15843 81 aa20.73■□□□□ 0.91
SKI-201ENST00000378536 SPIN4Q56A73 249 aa20.73■□□□□ 0.91
SKI-201ENST00000378536 ABHD13Q7L211 337 aa20.73■□□□□ 0.91
SKI-201ENST00000378536 POMGNT2Q8NAT1 580 aa20.73■□□□□ 0.91
SKI-201ENST00000378536 OR9A1PQ8NGU1 263 aa20.73■□□□□ 0.91
SKI-201ENST00000378536 ZBED6CLQ96FA7 236 aaPredicted RBP20.73■□□□□ 0.91
SKI-201ENST00000378536 IKZF3Q9UKT9 509 aa20.73■□□□□ 0.91
SKI-201ENST00000378536 CHURC1-FNTBB4DL54 471 aa20.73■□□□□ 0.91
SKI-201ENST00000378536 LOC730098B7Z3J9 87 aa20.73■□□□□ 0.91
SKI-201ENST00000378536 UGT2B17O75795 530 aa20.73■□□□□ 0.91
SKI-201ENST00000378536 NTSR1P30989 418 aa20.73■□□□□ 0.91
SKI-201ENST00000378536 ARRB1P49407 418 aaPredicted RBP20.73■□□□□ 0.91
SKI-201ENST00000378536 KCNC3Q14003 757 aa20.73■□□□□ 0.91
SKI-201ENST00000378536 HTR3DQ70Z44 454 aa20.73■□□□□ 0.91
SKI-201ENST00000378536 RGMAQ96B86 450 aa20.73■□□□□ 0.91
SKI-201ENST00000378536 CMTM7Q96FZ5 175 aa20.73■□□□□ 0.91
SKI-201ENST00000378536 LZTS1Q9Y250 596 aa20.73■□□□□ 0.91
SKI-201ENST00000378536 RFPL1O75677 317 aa20.73■□□□□ 0.91
SKI-201ENST00000378536 BMP7P18075 431 aa20.73■□□□□ 0.91
SKI-201ENST00000378536 LARS2Q15031 903 aaKnown RBP20.73■□□□□ 0.91
SKI-201ENST00000378536 RFX4Q33E94 735 aa20.73■□□□□ 0.91
SKI-201ENST00000378536 CYS1Q717R9 158 aa20.73■□□□□ 0.91
SKI-201ENST00000378536 DEPDC4Q8N2C3 294 aa20.73■□□□□ 0.91
SKI-201ENST00000378536 VANGL1Q8TAA9 524 aaPredicted RBP20.73■□□□□ 0.91
SKI-201ENST00000378536 ACSL5Q9ULC5 683 aa20.73■□□□□ 0.91
SKI-201ENST00000378536 A0A087WXM4 84 aa20.72■□□□□ 0.91
SKI-201ENST00000378536 WASH4PA8MWX3 477 aa20.72■□□□□ 0.91
SKI-201ENST00000378536 BHMG1C9JSJ3 638 aaPredicted RBP20.72■□□□□ 0.91
SKI-201ENST00000378536 FAM189A1O60320 539 aa20.72■□□□□ 0.91
SKI-201ENST00000378536 RNGTTO60942 597 aaKnown RBP20.72■□□□□ 0.91
SKI-201ENST00000378536 VARSP26640 1264 aaKnown RBP20.72■□□□□ 0.91
SKI-201ENST00000378536 LUZP2Q86TE4 346 aa20.72■□□□□ 0.91
SKI-201ENST00000378536 SLC9B2Q86UD5 537 aa20.72■□□□□ 0.91
SKI-201ENST00000378536 HEATR4Q86WZ0 1026 aa20.72■□□□□ 0.91
SKI-201ENST00000378536 RNF168Q8IYW5 571 aaPredicted RBP20.72■□□□□ 0.91
SKI-201ENST00000378536 LMX1AQ8TE12 382 aa20.72■□□□□ 0.91
SKI-201ENST00000378536 MGME1Q9BQP7 344 aa20.72■□□□□ 0.91
SKI-201ENST00000378536 CD244Q9BZW8 370 aa20.72■□□□□ 0.91
SKI-201ENST00000378536 SLC24A3Q9HC58 644 aa20.72■□□□□ 0.91
SKI-201ENST00000378536 ANKHQ9HCJ1 492 aa20.72■□□□□ 0.91
SKI-201ENST00000378536 G3V2T6 193 aa20.72■□□□□ 0.91
SKI-201ENST00000378536 TIPRLO75663 272 aa20.72■□□□□ 0.91
SKI-201ENST00000378536 S1PR4O95977 384 aa20.72■□□□□ 0.91
SKI-201ENST00000378536 PRPS1L1P21108 318 aa20.72■□□□□ 0.91
SKI-201ENST00000378536 KIAA0319Q5VV43 1072 aa20.72■□□□□ 0.91
SKI-201ENST00000378536 STEAP4Q687X5 459 aa20.72■□□□□ 0.91
SKI-201ENST00000378536 GALNT18Q6P9A2 607 aa20.72■□□□□ 0.91
SKI-201ENST00000378536 PQLC1Q8N2U9 271 aa20.72■□□□□ 0.91
SKI-201ENST00000378536 CPXM2Q8N436 756 aa20.72■□□□□ 0.91
SKI-201ENST00000378536 S100A14Q9HCY8 104 aa20.72■□□□□ 0.91
SKI-201ENST00000378536 ZNF282Q9UDV7 671 aaPredicted RBP20.72■□□□□ 0.91
SKI-201ENST00000378536 CNOT6Q9ULM6 557 aaKnown RBP20.72■□□□□ 0.91
SKI-201ENST00000378536 SLC6A4P31645 630 aa20.72■□□□□ 0.91
SKI-201ENST00000378536 HMGCLP35914 325 aa20.72■□□□□ 0.91
SKI-201ENST00000378536 RPL4P36578 427 aaKnown RBP20.72■□□□□ 0.91
SKI-201ENST00000378536 FAM189BP81408 668 aa20.72■□□□□ 0.91
SKI-201ENST00000378536 SLC13A2Q13183 592 aa20.72■□□□□ 0.91
SKI-201ENST00000378536 TMEM245Q9H330 911 aa20.72■□□□□ 0.91
SKI-201ENST00000378536 CD207Q9UJ71 328 aa20.72■□□□□ 0.91
SKI-201ENST00000378536 TMEM233B4DJY2 109 aa20.72■□□□□ 0.91
SKI-201ENST00000378536 SCELO95171 688 aa20.72■□□□□ 0.91
SKI-201ENST00000378536 EBLN1P0CF75 366 aa20.72■□□□□ 0.91
SKI-201ENST00000378536 CD68P34810 354 aaPredicted RBP20.72■□□□□ 0.91
SKI-201ENST00000378536 DEFA1P59665 94 aa20.72■□□□□ 0.91
SKI-201ENST00000378536 DEFA3P59666 94 aa20.72■□□□□ 0.91
SKI-201ENST00000378536 OR4E2Q8NGC2 313 aa20.72■□□□□ 0.91
SKI-201ENST00000378536 CLN6Q9NWW5 311 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms