RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 ANGPTL1O95841 491 aa16.26■□□□□ 0.19
PCDHA1-201ENST00000378133 EOMESO95936 686 aa16.26■□□□□ 0.19
PCDHA1-201ENST00000378133 PSMB9P28065 219 aa16.26■□□□□ 0.19
PCDHA1-201ENST00000378133 RYKP34925 604 aa16.26■□□□□ 0.19
PCDHA1-201ENST00000378133 NR4A2P43354 598 aa16.26■□□□□ 0.19
PCDHA1-201ENST00000378133 NPTX1Q15818 432 aa16.26■□□□□ 0.19
PCDHA1-201ENST00000378133 CLIP4Q8N3C7 705 aa16.26■□□□□ 0.19
PCDHA1-201ENST00000378133 SLC47A1Q96FL8 570 aa16.26■□□□□ 0.19
PCDHA1-201ENST00000378133 ZNF583Q96ND8 569 aa16.26■□□□□ 0.19
PCDHA1-201ENST00000378133 ZNF300Q96RE9 604 aaPredicted RBP16.26■□□□□ 0.19
PCDHA1-201ENST00000378133 C17orf80Q9BSJ5 609 aa16.26■□□□□ 0.19
PCDHA1-201ENST00000378133 SLCO3A1Q9UIG8 710 aa16.26■□□□□ 0.19
PCDHA1-201ENST00000378133 AGO1Q9UL18 857 aaKnown RBP16.26■□□□□ 0.19
PCDHA1-201ENST00000378133 ARIH1Q9Y4X5 557 aaPredicted RBP16.26■□□□□ 0.19
PCDHA1-201ENST00000378133 SYN3O14994 580 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 CA12O43570 354 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 ASNA1O43681 348 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 KDELR3O43731 214 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 CNPP09543 421 aaKnown RBP16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 NR6A1Q15406 480 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 TRIM71Q2Q1W2 868 aaKnown RBP16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 RFTN2Q52LD8 501 aaPredicted RBP16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 MFSD14CQ5VZR4 134 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 CYP20A1Q6UW02 462 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 LACC1Q8IV20 430 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 FAM126BQ8IXS8 530 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 ACTR8Q9H981 624 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 PNMA8BQ9ULN7 279 aaPredicted RBP16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 VPS9D1Q9Y2B5 631 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 RFPL2O75678 378 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 UPK1BO75841 260 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 VNN2O95498 520 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 ACVR2AP27037 513 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 PRR23BQ6ZRT6 265 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 LYSMD2Q8IV50 215 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 DENND1CQ8IV53 801 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 MMAAQ8IVH4 418 aaKnown RBP16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 EID3Q8N140 333 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 AADATQ8N5Z0 425 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 OR2T12Q8NG77 320 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 LINC01599Q8WXQ3 324 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 ITCHQ96J02 903 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 BTBD2Q9BX70 525 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 SLIRPQ9GZT3 109 aaKnown RBP16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 TRIT1Q9H3H1 467 aaKnown RBP16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 GORASP2Q9H8Y8 452 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 MOV10Q9HCE1 1003 aaKnown RBP16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 ZMYM5Q9UJ78 669 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 GABRQQ9UN88 632 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 H3BNC9 293 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 PRMT5O14744 637 aaPredicted RBP16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 BCKDKO14874 412 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 SEPT4O43236 478 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 DLGAP3O95886 979 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 FTH1P02794 183 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 FMO3P31513 532 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 EIF2DP41214 584 aaKnown RBP16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 ST13P50502 369 aaKnown RBP16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 SGSHP51688 502 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 RAPSNQ13702 412 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 MRPL58Q14197 206 aaKnown RBP16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 AP5B1Q2VPB7 878 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 LRIT3Q3SXY7 679 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 TMEM179BQ7Z7N9 219 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 PLD3Q8IV08 490 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 POC5Q8NA72 575 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 OR4F6Q8NGB9 312 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 KCNJ9Q92806 393 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 LGALS12Q96DT0 336 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 ZNF486Q96H40 463 aaPredicted RBP16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 PCDHGA10Q9Y5H3 936 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 ORC6Q9Y5N6 252 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 COMMD10Q9Y6G5 202 aa16.25■□□□□ 0.19
PCDHA1-201ENST00000378133 ISPDA4D126 451 aa16.24■□□□□ 0.19
PCDHA1-201ENST00000378133 CD6P30203 668 aa16.24■□□□□ 0.19
PCDHA1-201ENST00000378133 SEPHS1P49903 392 aa16.24■□□□□ 0.19
PCDHA1-201ENST00000378133 CDH4P55283 916 aa16.24■□□□□ 0.19
PCDHA1-201ENST00000378133 CLCA4Q14CN2 919 aa16.24■□□□□ 0.19
PCDHA1-201ENST00000378133 ABRAXAS2Q15018 415 aa16.24■□□□□ 0.19
PCDHA1-201ENST00000378133 DCP2Q8IU60 420 aaKnown RBP16.24■□□□□ 0.19
PCDHA1-201ENST00000378133 ADHFE1Q8IWW8 467 aa16.24■□□□□ 0.19
PCDHA1-201ENST00000378133 RAVER1Q8IY67 606 aaKnown RBP16.24■□□□□ 0.19
PCDHA1-201ENST00000378133 PEX5LQ8IYB4 626 aa16.24■□□□□ 0.19
PCDHA1-201ENST00000378133 ZNF566Q969W8 418 aa16.24■□□□□ 0.19
PCDHA1-201ENST00000378133 TP63Q9H3D4 680 aaPredicted RBP16.24■□□□□ 0.19
PCDHA1-201ENST00000378133 HEBP1Q9NRV9 189 aa16.24■□□□□ 0.19
PCDHA1-201ENST00000378133 POLR3HQ9Y535 204 aaPredicted RBP16.24■□□□□ 0.19
PCDHA1-201ENST00000378133 U3KQV3 271 aa16.24■□□□□ 0.19
PCDHA1-201ENST00000378133 M0QX08 132 aa16.24■□□□□ 0.19
PCDHA1-201ENST00000378133 OR7A17O14581 309 aa16.24■□□□□ 0.19
PCDHA1-201ENST00000378133 SLC16A6O15403 523 aa16.24■□□□□ 0.19
PCDHA1-201ENST00000378133 GJB5O95377 273 aa16.24■□□□□ 0.19
PCDHA1-201ENST00000378133 KRT75O95678 551 aa16.24■□□□□ 0.19
PCDHA1-201ENST00000378133 F11P03951 625 aa16.24■□□□□ 0.19
PCDHA1-201ENST00000378133 MYCLP1P12525 358 aaPredicted RBP16.24■□□□□ 0.19
PCDHA1-201ENST00000378133 DCTP40126 519 aa16.24■□□□□ 0.19
PCDHA1-201ENST00000378133 PWP1Q13610 501 aa16.24■□□□□ 0.19
PCDHA1-201ENST00000378133 C5orf22Q49AR2 442 aa16.24■□□□□ 0.19
PCDHA1-201ENST00000378133 FAM26DQ5JW98 314 aa16.24■□□□□ 0.19
PCDHA1-201ENST00000378133 LINGO4Q6UY18 593 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms