RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 IMP3Q9NV31 184 aaKnown RBP4.84□□□□□ -1.63
PCDH9-201ENST00000377861 COL20A1Q9P218 1284 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 LRRC37A3O60309 1634 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 TBC1D3KA0A087X1G2 549 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 TBC1D3BA6NDS4 549 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 TBC1D3FA6NER0 549 aaPredicted RBP4.84□□□□□ -1.63
PCDH9-201ENST00000377861 GLUD1P00367 558 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 ADAP00813 363 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 UQCRC1P31930 480 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 PPP3R1P63098 170 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 SLC25A3Q00325 362 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 TBC1D3GQ6DHY5 549 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 CES3Q6UWW8 571 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 GGTA1PQ4G0N0 100 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 ASB18Q6ZVZ8 466 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 ARMCX1Q9P291 453 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 NADKO95544 446 aaPredicted RBP4.84□□□□□ -1.63
PCDH9-201ENST00000377861 LGALS2P05162 132 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 ETS2P15036 469 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 HALP42357 657 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 ATP12AP54707 1039 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 NECAB2Q7Z6G3 386 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 PTGR2Q8N8N7 351 aaPredicted RBP4.84□□□□□ -1.63
PCDH9-201ENST00000377861 MROH6A6NGR9 719 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 KRBOX1C9JBD0 128 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 SCAF4O95104 1147 aaKnown RBP4.84□□□□□ -1.63
PCDH9-201ENST00000377861 MARVELD3Q96A59 401 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 TMEM39BQ9GZU3 492 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 TPK1Q9H3S4 243 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 ACSS1Q9NUB1 689 aaPredicted RBP4.84□□□□□ -1.63
PCDH9-201ENST00000377861 ADH1CP00326 375 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 UBL4AP11441 157 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 AVPR1AP37288 418 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 HECTD2Q5U5R9 776 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 TCEAL7Q9BRU2 100 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 SLC12A9Q9BXP2 914 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 COQ10BQ9H8M1 238 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 DDX4Q9NQI0 724 aaKnown RBP4.84□□□□□ -1.63
PCDH9-201ENST00000377861 DRGXA6NNA5 263 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 DLX3O60479 287 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 CRADDP78560 199 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 UGT3A2Q3SY77 523 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 ZRANB3Q5FWF4 1079 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 KCTD8Q6ZWB6 473 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 SIMC1Q8NDZ2 872 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 TMEM169Q96HH4 297 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 DOK1Q99704 481 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 ZDHHC3Q9NYG2 299 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 ABHD14A-ACY1A0A1B0GW23 586 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 DENND5AQ6IQ26 1287 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 TRMT11Q7Z4G4 463 aaKnown RBP4.84□□□□□ -1.63
PCDH9-201ENST00000377861 SCN4BQ8IWT1 228 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 CFAP206Q8IYR0 622 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 WDR6Q9NNW5 1121 aaKnown RBP4.84□□□□□ -1.63
PCDH9-201ENST00000377861 GATBO75879 557 aaKnown RBP4.84□□□□□ -1.63
PCDH9-201ENST00000377861 USP17L7P0C7H9 530 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 JUNDP17535 347 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 PTPN2P17706 415 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 KDELR2P33947 212 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 PIK3R6Q5UE93 754 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 OR4F6Q8NGB9 312 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 ELP5Q8TE02 316 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 TAMM41Q96BW9 452 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 LGMNQ99538 433 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 USP3Q9Y6I4 520 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 TLR5O60602 858 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 USP39Q53GS9 565 aaKnown RBP4.84□□□□□ -1.64
PCDH9-201ENST00000377861 LRRC66Q68CR7 880 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 C17orf64Q86WR6 236 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 OLIG1Q8TAK6 271 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 TTLL2Q9BWV7 592 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 A0A1W2PQ72 361 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 ANKRD65E5RJM6 399 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 TSPAN9O75954 239 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 UGT1A3P35503 534 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 ADAM15Q13444 863 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 IFNEQ86WN2 208 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 UBQLNLQ8IYU4 475 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 BTRCQ9Y297 605 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 KCNK1O00180 336 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 UGT1A9O60656 530 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 RFPL2O75678 378 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 RAB40ALP0C0E4 278 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 UGT1A6P19224 532 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 UGT1A4P22310 534 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 PSEN2P49810 448 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 SNRPGP62308 76 aaKnown RBP4.84□□□□□ -1.64
PCDH9-201ENST00000377861 FAM69AQ5T7M9 428 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 RAB40AQ8WXH6 277 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 TTPALQ9BTX7 342 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 UGT1A7Q9HAW7 530 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 UGT1A10Q9HAW8 530 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 UGT1A8Q9HAW9 530 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 KCNK13Q9HB14 408 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 PCDHB11Q9Y5F2 797 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 RGS11O94810 467 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 IFI44LQ53G44 452 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 ARHGAP39Q9C0H5 1083 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 DNTTIP1Q9H147 329 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 ALG9Q9H6U8 611 aa4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms