RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 MCUBQ9NWR8 336 aa10.62□□□□□ -0.71
HIF3A-205ENST00000377670 MYO5AQ9Y4I1 1855 aaKnown RBP10.62□□□□□ -0.71
HIF3A-205ENST00000377670 KIAA0100Q14667 2235 aaKnown RBP10.62□□□□□ -0.71
HIF3A-205ENST00000377670 E7ENX8 843 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 BMP7P18075 431 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 CPN2P22792 545 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 MPSTP25325 297 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 RPS24P62847 133 aaKnown RBP10.61□□□□□ -0.71
HIF3A-205ENST00000377670 RNASE12Q5GAN4 147 aaKnown RBP10.61□□□□□ -0.71
HIF3A-205ENST00000377670 RNASEH2BQ5TBB1 312 aaKnown RBP10.61□□□□□ -0.71
HIF3A-205ENST00000377670 Q6ZVU0 165 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 RAB43Q86YS6 212 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 MPP5Q8N3R9 675 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 TXNDC5Q8NBS9 432 aaKnown RBP10.61□□□□□ -0.71
HIF3A-205ENST00000377670 BORCS6Q96GS4 357 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 PRR11Q96HE9 360 aaPredicted RBP10.61□□□□□ -0.71
HIF3A-205ENST00000377670 PTPN18Q99952 460 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 SGIP1Q9BQI5 828 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 PIGUQ9H490 435 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 SP140LQ9H930 580 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 GIN1Q9NXP7 522 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 MMP20O60882 483 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 TMEM63AO94886 807 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 HAPLN1P10915 354 aaPredicted RBP10.61□□□□□ -0.71
HIF3A-205ENST00000377670 ITGA3P26006 1051 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 RHAGQ02094 409 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 MADCAM1Q13477 382 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 RUNX3Q13761 415 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 C1orf220Q5T0J3 134 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 BRAT1Q6PJG6 821 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 TMCO2Q7Z6W1 182 aaPredicted RBP10.61□□□□□ -0.71
HIF3A-205ENST00000377670 SLC43A3Q8NBI5 491 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 LMO3Q8TAP4 145 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 NELL1Q92832 810 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 AGAP2Q99490 1192 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 CCSER2Q9H7U1 834 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 FZD10Q9ULW2 581 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 WASF2Q9Y6W5 498 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 H3BUI4 141 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 XKRYO14609 159 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 MUSKO15146 869 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 GJB5O95377 273 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 CLUP10909 449 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 PTPN5P54829 565 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 IL10RBQ08334 325 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 ANXA8L1Q5VT79 327 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 THOC7Q6I9Y2 204 aaKnown RBP10.61□□□□□ -0.71
HIF3A-205ENST00000377670 LIN54Q6MZP7 749 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 ZNF280BQ86YH2 543 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 NKD2Q969F2 451 aaPredicted RBP10.61□□□□□ -0.71
HIF3A-205ENST00000377670 ZNF607Q96SK3 696 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 FAM124BQ9H5Z6 455 aaPredicted RBP10.61□□□□□ -0.71
HIF3A-205ENST00000377670 SERINC1Q9NRX5 453 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 DNAJB4Q9UDY4 337 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 NWD2Q9ULI1 1742 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 CHRNGP07510 517 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 NMBRP28336 390 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 CDH5P33151 784 aaPredicted RBP10.61□□□□□ -0.71
HIF3A-205ENST00000377670 SOX4Q06945 474 aaPredicted RBP10.61□□□□□ -0.71
HIF3A-205ENST00000377670 GPRIN3Q6ZVF9 776 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 RDH11Q8TC12 318 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 C17orf50Q8WW18 174 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 TMEM40Q8WWA1 233 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 TBATAQ96M53 351 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 WDR6Q9NNW5 1121 aaKnown RBP10.61□□□□□ -0.71
HIF3A-205ENST00000377670 ABCB9Q9NP78 766 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 TLR6Q9Y2C9 796 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 IQCMA0A1B0GVH7 501 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 PRKCGP05129 697 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 PRG2P13727 222 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 L1CAMP32004 1257 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 HSD17B2P37059 387 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 TREML1Q86YW5 311 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 OR4K17Q8NGC6 315 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 PHF10Q8WUB8 498 aaKnown RBP10.61□□□□□ -0.71
HIF3A-205ENST00000377670 ART5Q96L15 291 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 HIST1H2AAQ96QV6 131 aa10.61□□□□□ -0.71
HIF3A-205ENST00000377670 H3BNX3 289 aa10.6□□□□□ -0.71
HIF3A-205ENST00000377670 EDIL3O43854 480 aa10.6□□□□□ -0.71
HIF3A-205ENST00000377670 APBB3O95704 486 aa10.6□□□□□ -0.71
HIF3A-205ENST00000377670 CER1O95813 267 aa10.6□□□□□ -0.71
HIF3A-205ENST00000377670 ALPPP05187 535 aa10.6□□□□□ -0.71
HIF3A-205ENST00000377670 CADM2Q8N3J6 435 aa10.6□□□□□ -0.71
HIF3A-205ENST00000377670 MAFAQ8NHW3 353 aaPredicted RBP10.6□□□□□ -0.71
HIF3A-205ENST00000377670 CRYGNQ8WXF5 182 aa10.6□□□□□ -0.71
HIF3A-205ENST00000377670 PHF12Q96QT6 1004 aa10.6□□□□□ -0.71
HIF3A-205ENST00000377670 CADM1Q9BY67 442 aaKnown RBP10.6□□□□□ -0.71
HIF3A-205ENST00000377670 PTTG2Q9NZH5 202 aa10.6□□□□□ -0.71
HIF3A-205ENST00000377670 NAV1Q8NEY1 1877 aa10.6□□□□□ -0.71
HIF3A-205ENST00000377670 FAM149AA5PLN7 773 aa10.6□□□□□ -0.71
HIF3A-205ENST00000377670 SIN3BO75182 1162 aa10.6□□□□□ -0.71
HIF3A-205ENST00000377670 CNMDO75829 334 aa10.6□□□□□ -0.71
HIF3A-205ENST00000377670 KAT7O95251 611 aa10.6□□□□□ -0.71
HIF3A-205ENST00000377670 C9P02748 559 aa10.6□□□□□ -0.71
HIF3A-205ENST00000377670 S100A6P06703 90 aa10.6□□□□□ -0.71
HIF3A-205ENST00000377670 FESP07332 822 aa10.6□□□□□ -0.71
HIF3A-205ENST00000377670 PKMP14618 531 aaKnown RBP10.6□□□□□ -0.71
HIF3A-205ENST00000377670 JUNDP17535 347 aa10.6□□□□□ -0.71
HIF3A-205ENST00000377670 TYRP1P17643 537 aa10.6□□□□□ -0.71
HIF3A-205ENST00000377670 HNMTP50135 292 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms