RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 GTF2H3Q13889 308 aa16.38■□□□□ 0.21
HLA-A-202ENST00000376806 TRIM25Q14258 630 aaKnown RBP16.38■□□□□ 0.21
HLA-A-202ENST00000376806 IMPG1Q17R60 797 aa16.38■□□□□ 0.21
HLA-A-202ENST00000376806 TIGD2Q4W5G0 525 aa16.38■□□□□ 0.21
HLA-A-202ENST00000376806 RFTN2Q52LD8 501 aaPredicted RBP16.38■□□□□ 0.21
HLA-A-202ENST00000376806 SGO1Q5FBB7 561 aa16.38■□□□□ 0.21
HLA-A-202ENST00000376806 IL23RQ5VWK5 629 aa16.38■□□□□ 0.21
HLA-A-202ENST00000376806 NUDT18Q6ZVK8 323 aa16.38■□□□□ 0.21
HLA-A-202ENST00000376806 ZFAND4Q86XD8 727 aa16.38■□□□□ 0.21
HLA-A-202ENST00000376806 TRAPPC5Q8IUR0 188 aa16.38■□□□□ 0.21
HLA-A-202ENST00000376806 MINDY1Q8N5J2 469 aa16.38■□□□□ 0.21
HLA-A-202ENST00000376806 PROKR1Q8TCW9 393 aa16.38■□□□□ 0.21
HLA-A-202ENST00000376806 VPS33AQ96AX1 596 aa16.38■□□□□ 0.21
HLA-A-202ENST00000376806 TRMT61BQ9BVS5 477 aaKnown RBP16.38■□□□□ 0.21
HLA-A-202ENST00000376806 ATG10Q9H0Y0 220 aa16.38■□□□□ 0.21
HLA-A-202ENST00000376806 LEF1Q9UJU2 399 aaPredicted RBP16.38■□□□□ 0.21
HLA-A-202ENST00000376806 SLC22A14Q9Y267 594 aa16.38■□□□□ 0.21
HLA-A-202ENST00000376806 COL4A2P08572 1712 aa16.38■□□□□ 0.21
HLA-A-202ENST00000376806 LIN7AO14910 233 aaPredicted RBP16.37■□□□□ 0.21
HLA-A-202ENST00000376806 RPSAP08865 295 aaKnown RBP16.37■□□□□ 0.21
HLA-A-202ENST00000376806 SLC2A4P14672 509 aa16.37■□□□□ 0.21
HLA-A-202ENST00000376806 DRD3P35462 400 aa16.37■□□□□ 0.21
HLA-A-202ENST00000376806 SOX9P48436 509 aa16.37■□□□□ 0.21
HLA-A-202ENST00000376806 ATXN3P54252 364 aaPredicted RBP16.37■□□□□ 0.21
HLA-A-202ENST00000376806 PFN3P60673 137 aa16.37■□□□□ 0.21
HLA-A-202ENST00000376806 PRKG2Q13237 762 aa16.37■□□□□ 0.21
HLA-A-202ENST00000376806 CPSF6Q16630 551 aaKnown RBP eCLIP16.37■□□□□ 0.21
HLA-A-202ENST00000376806 SLC44A4Q53GD3 710 aa16.37■□□□□ 0.21
HLA-A-202ENST00000376806 ZFP1Q6P2D0 407 aa16.37■□□□□ 0.21
HLA-A-202ENST00000376806 CACUL1Q86Y37 369 aa16.37■□□□□ 0.21
HLA-A-202ENST00000376806 RGL4Q8IZJ4 473 aa16.37■□□□□ 0.21
HLA-A-202ENST00000376806 L3MBTL4Q8NA19 623 aa16.37■□□□□ 0.21
HLA-A-202ENST00000376806 FOXJ1Q92949 421 aa16.37■□□□□ 0.21
HLA-A-202ENST00000376806 NAF1Q96HR8 494 aaKnown RBP16.37■□□□□ 0.21
HLA-A-202ENST00000376806 ACTL8Q9H568 366 aa16.37■□□□□ 0.21
HLA-A-202ENST00000376806 LMCD1Q9NZU5 365 aa16.37■□□□□ 0.21
HLA-A-202ENST00000376806 GULP1Q9UBP9 304 aa16.37■□□□□ 0.21
HLA-A-202ENST00000376806 PSMD13Q9UNM6 376 aa16.37■□□□□ 0.21
HLA-A-202ENST00000376806 NME4O00746 187 aa16.37■□□□□ 0.21
HLA-A-202ENST00000376806 ANKRD28O15084 1053 aa16.37■□□□□ 0.21
HLA-A-202ENST00000376806 MID1O15344 667 aa16.37■□□□□ 0.21
HLA-A-202ENST00000376806 ACADSP16219 412 aa16.37■□□□□ 0.21
HLA-A-202ENST00000376806 POU3F3P20264 500 aaPredicted RBP16.37■□□□□ 0.21
HLA-A-202ENST00000376806 ATP6V1C1P21283 382 aa16.37■□□□□ 0.21
HLA-A-202ENST00000376806 DLX2Q07687 328 aaPredicted RBP16.37■□□□□ 0.21
HLA-A-202ENST00000376806 TRAP1Q12931 704 aaKnown RBP16.37■□□□□ 0.21
HLA-A-202ENST00000376806 MAP7D1Q3KQU3 841 aa16.37■□□□□ 0.21
HLA-A-202ENST00000376806 C6orf10Q5SRN2 563 aa16.37■□□□□ 0.21
HLA-A-202ENST00000376806 KBTBD2Q8IY47 623 aa16.37■□□□□ 0.21
HLA-A-202ENST00000376806 CHPFQ8IZ52 775 aa16.37■□□□□ 0.21
HLA-A-202ENST00000376806 AADATQ8N5Z0 425 aa16.37■□□□□ 0.21
HLA-A-202ENST00000376806 ZNF513Q8N8E2 541 aaPredicted RBP16.37■□□□□ 0.21
HLA-A-202ENST00000376806 ATL1Q8WXF7 558 aa16.37■□□□□ 0.21
HLA-A-202ENST00000376806 LRRC58Q96CX6 371 aa16.37■□□□□ 0.21
HLA-A-202ENST00000376806 RSRC1Q96IZ7 334 aaKnown RBP16.37■□□□□ 0.21
HLA-A-202ENST00000376806 RIPOR3Q96MK2 946 aa16.37■□□□□ 0.21
HLA-A-202ENST00000376806 FOPNLQ96NB1 174 aa16.37■□□□□ 0.21
HLA-A-202ENST00000376806 PCDHAC1Q9H158 963 aa16.37■□□□□ 0.21
HLA-A-202ENST00000376806 RSPH9Q9H1X1 276 aaPredicted RBP16.37■□□□□ 0.21
HLA-A-202ENST00000376806 LRTM1Q9HBL6 345 aa16.37■□□□□ 0.21
HLA-A-202ENST00000376806 TRIM39Q9HCM9 518 aa16.37■□□□□ 0.21
HLA-A-202ENST00000376806 ASIC5Q9NY37 505 aa16.37■□□□□ 0.21
HLA-A-202ENST00000376806 STOX2Q9P2F5 926 aaPredicted RBP16.37■□□□□ 0.21
HLA-A-202ENST00000376806 ATXN10Q9UBB4 475 aa16.37■□□□□ 0.21
HLA-A-202ENST00000376806 ZNHIT2Q9UHR6 403 aa16.37■□□□□ 0.21
HLA-A-202ENST00000376806 SNX6Q9UNH7 406 aa16.37■□□□□ 0.21
HLA-A-202ENST00000376806 EIF3LQ9Y262 564 aaKnown RBP16.37■□□□□ 0.21
HLA-A-202ENST00000376806 DYTNA2CJ06 578 aa16.36■□□□□ 0.21
HLA-A-202ENST00000376806 H3BM21 787 aa16.36■□□□□ 0.21
HLA-A-202ENST00000376806 PDYNP01213 254 aa16.36■□□□□ 0.21
HLA-A-202ENST00000376806 JAK1P23458 1154 aa16.36■□□□□ 0.21
HLA-A-202ENST00000376806 PDHA2P29803 388 aa16.36■□□□□ 0.21
HLA-A-202ENST00000376806 GNPDA1P46926 289 aa16.36■□□□□ 0.21
HLA-A-202ENST00000376806 CAMK2GQ13555 558 aaPredicted RBP16.36■□□□□ 0.21
HLA-A-202ENST00000376806 NFYCQ13952 458 aa16.36■□□□□ 0.21
HLA-A-202ENST00000376806 CAPRIN1Q14444 709 aaKnown RBP16.36■□□□□ 0.21
HLA-A-202ENST00000376806 TLR1Q15399 786 aa16.36■□□□□ 0.21
HLA-A-202ENST00000376806 CST6Q15828 149 aa16.36■□□□□ 0.21
HLA-A-202ENST00000376806 CCSMST1Q4G0I0 132 aa16.36■□□□□ 0.21
HLA-A-202ENST00000376806 PAGE3Q5JUK9 113 aa16.36■□□□□ 0.21
HLA-A-202ENST00000376806 AGBL4Q5VU57 503 aa16.36■□□□□ 0.21
HLA-A-202ENST00000376806 KLHDC8AQ8IYD2 350 aa16.36■□□□□ 0.21
HLA-A-202ENST00000376806 ZNF514Q96K75 400 aaPredicted RBP16.36■□□□□ 0.21
HLA-A-202ENST00000376806 MAGEB10Q96LZ2 347 aaPredicted RBP16.36■□□□□ 0.21
HLA-A-202ENST00000376806 CCDC138Q96M89 665 aa16.36■□□□□ 0.21
HLA-A-202ENST00000376806 ACPTQ9BZG2 426 aa16.36■□□□□ 0.21
HLA-A-202ENST00000376806 EPS15L1Q9UBC2 864 aa16.36■□□□□ 0.21
HLA-A-202ENST00000376806 ATG2BQ96BY7 2078 aa16.36■□□□□ 0.21
HLA-A-202ENST00000376806 DOCK9Q9BZ29 2069 aa16.36■□□□□ 0.21
HLA-A-202ENST00000376806 GRXCR2A6NFK2 248 aa16.35■□□□□ 0.21
HLA-A-202ENST00000376806 VEGFDO43915 354 aa16.35■□□□□ 0.21
HLA-A-202ENST00000376806 PRAMEF4O60810 478 aa16.35■□□□□ 0.21
HLA-A-202ENST00000376806 ADH1BP00325 375 aa16.35■□□□□ 0.21
HLA-A-202ENST00000376806 ZNF8P17098 575 aaPredicted RBP16.35■□□□□ 0.21
HLA-A-202ENST00000376806 SLC6A2P23975 617 aa16.35■□□□□ 0.21
HLA-A-202ENST00000376806 PRAMEF9Q5VWM5 478 aa16.35■□□□□ 0.21
HLA-A-202ENST00000376806 AGTRAPQ6RW13 159 aa16.35■□□□□ 0.21
HLA-A-202ENST00000376806 XKR5Q6UX68 686 aa16.35■□□□□ 0.21
HLA-A-202ENST00000376806 SPATA24Q86W54 205 aa16.35■□□□□ 0.21
HLA-A-202ENST00000376806 SLC15A3Q8IY34 581 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms