RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 CLDN2P57739 230 aa12.26□□□□□ -0.45
CLCN6-206ENST00000376496 SESN3P58005 492 aa12.26□□□□□ -0.45
CLCN6-206ENST00000376496 AP5B1Q2VPB7 878 aa12.26□□□□□ -0.45
CLCN6-206ENST00000376496 BCL7AQ4VC05 210 aa12.26□□□□□ -0.45
CLCN6-206ENST00000376496 ATP6AP1LQ52LC2 224 aa12.26□□□□□ -0.45
CLCN6-206ENST00000376496 DUS1LQ6P1R4 473 aaKnown RBP12.26□□□□□ -0.45
CLCN6-206ENST00000376496 CHST15Q7LFX5 561 aaPredicted RBP12.26□□□□□ -0.45
CLCN6-206ENST00000376496 RALGPS2Q86X27 583 aaPredicted RBP12.26□□□□□ -0.45
CLCN6-206ENST00000376496 MIER2Q8N344 545 aa12.26□□□□□ -0.45
CLCN6-206ENST00000376496 SIPA1Q96FS4 1042 aa12.26□□□□□ -0.45
CLCN6-206ENST00000376496 OR4K3Q96R72 315 aa12.26□□□□□ -0.45
CLCN6-206ENST00000376496 C2orf42Q9NWW7 574 aa12.26□□□□□ -0.45
CLCN6-206ENST00000376496 SH2B3Q9UQQ2 575 aa12.26□□□□□ -0.45
CLCN6-206ENST00000376496 POLR3HQ9Y535 204 aaPredicted RBP12.26□□□□□ -0.45
CLCN6-206ENST00000376496 GPR45Q9Y5Y3 372 aa12.26□□□□□ -0.45
CLCN6-206ENST00000376496 USP34Q70CQ2 3546 aa12.26□□□□□ -0.45
CLCN6-206ENST00000376496 COL6A3P12111 3177 aa12.26□□□□□ -0.45
CLCN6-206ENST00000376496 E7EQ34 232 aa12.26□□□□□ -0.45
CLCN6-206ENST00000376496 MANBAO00462 879 aa12.26□□□□□ -0.45
CLCN6-206ENST00000376496 CLDN9O95484 217 aa12.26□□□□□ -0.45
CLCN6-206ENST00000376496 CATP04040 527 aaKnown RBP12.26□□□□□ -0.45
CLCN6-206ENST00000376496 SLC2A4P14672 509 aa12.26□□□□□ -0.45
CLCN6-206ENST00000376496 IMPA1P29218 277 aa12.26□□□□□ -0.45
CLCN6-206ENST00000376496 ACSL1P33121 698 aa12.26□□□□□ -0.45
CLCN6-206ENST00000376496 GGT5P36269 586 aa12.26□□□□□ -0.45
CLCN6-206ENST00000376496 RPL38P63173 70 aaKnown RBP12.26□□□□□ -0.45
CLCN6-206ENST00000376496 PLIN5Q00G26 463 aa12.26□□□□□ -0.45
CLCN6-206ENST00000376496 SGCGQ13326 291 aa12.26□□□□□ -0.45
CLCN6-206ENST00000376496 SP140Q13342 867 aa12.26□□□□□ -0.45
CLCN6-206ENST00000376496 SUSD1Q6UWL2 747 aa12.26□□□□□ -0.45
CLCN6-206ENST00000376496 ADAMTSL4Q6UY14 1074 aa12.26□□□□□ -0.45
CLCN6-206ENST00000376496 RASGRP3Q8IV61 690 aa12.26□□□□□ -0.45
CLCN6-206ENST00000376496 TP53I13Q8NBR0 393 aaPredicted RBP12.26□□□□□ -0.45
CLCN6-206ENST00000376496 MRGPRX1Q96LB2 322 aa12.26□□□□□ -0.45
CLCN6-206ENST00000376496 SLC17A9Q9BYT1 436 aa12.26□□□□□ -0.45
CLCN6-206ENST00000376496 WDR26Q9H7D7 661 aa12.26□□□□□ -0.45
CLCN6-206ENST00000376496 EFCAB1Q9HAE3 211 aa12.26□□□□□ -0.45
CLCN6-206ENST00000376496 DNAJC11Q9NVH1 559 aa12.26□□□□□ -0.45
CLCN6-206ENST00000376496 COL4A2P08572 1712 aa12.26□□□□□ -0.45
CLCN6-206ENST00000376496 H0Y8X5 98 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 LSM1O15116 133 aaKnown RBP12.25□□□□□ -0.45
CLCN6-206ENST00000376496 AXIN1O15169 862 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 AP1G1O43747 822 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 ULK1O75385 1050 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 C1orf105O95561 183 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 PDYNP01213 254 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 G6PDP11413 515 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 NDUFV2P19404 249 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 CD22P20273 847 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 IL12AP29459 219 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 THOP1P52888 689 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 CHIT1Q13231 466 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 DDX39BQ13838 428 aaKnown RBP12.25□□□□□ -0.45
CLCN6-206ENST00000376496 HERC3Q15034 1050 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 IL23RQ5VWK5 629 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 NEK10Q6ZWH5 1172 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 THOC6Q86W42 341 aaKnown RBP12.25□□□□□ -0.45
CLCN6-206ENST00000376496 RGL4Q8IZJ4 473 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 KIRREL3Q8IZU9 778 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 ARHGAP24Q8N264 748 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 OR5AR1Q8NGP9 310 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 CLHC1Q8NHS4 586 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 TACO1Q9BSH4 297 aaKnown RBP12.25□□□□□ -0.45
CLCN6-206ENST00000376496 NTMT1Q9BV86 223 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 CCL27Q9Y4X3 112 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 MRASO14807 208 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 SLC22A2O15244 555 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 SLC16A5O15375 505 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 PLRG1O43660 514 aaKnown RBP12.25□□□□□ -0.45
CLCN6-206ENST00000376496 CIB2O75838 187 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 RSL1D1O76021 490 aaKnown RBP12.25□□□□□ -0.45
CLCN6-206ENST00000376496 EBLN1P0CF75 366 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 ACP5P13686 325 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 IGFALSP35858 605 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 CASP2P42575 452 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 CDKL1Q00532 357 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 CEACAM7Q14002 265 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 RCN1Q15293 331 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 ZRSR2Q15696 482 aaKnown RBP12.25□□□□□ -0.45
CLCN6-206ENST00000376496 LRIT3Q3SXY7 679 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 WASHC2DQ5SRD0 308 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 SYTL1Q8IYJ3 562 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 ZNF480Q8WV37 535 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 HMGB4Q8WW32 186 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 GAS2L1Q99501 681 aaPredicted RBP12.25□□□□□ -0.45
CLCN6-206ENST00000376496 MRPL1Q9BYD6 325 aaKnown RBP12.25□□□□□ -0.45
CLCN6-206ENST00000376496 MMADHCQ9H3L0 296 aaPredicted RBP12.25□□□□□ -0.45
CLCN6-206ENST00000376496 OSGEPL1Q9H4B0 414 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 PRM3Q9NNZ6 103 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 SDR39U1Q9NRG7 319 aaPredicted RBP12.25□□□□□ -0.45
CLCN6-206ENST00000376496 RIC8BQ9NVN3 520 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 AIG1Q9NVV5 245 aa12.25□□□□□ -0.45
CLCN6-206ENST00000376496 TDRKHQ9Y2W6 561 aaKnown RBP12.25□□□□□ -0.45
CLCN6-206ENST00000376496 TCRBV21S2A2A0A5A6 115 aa12.24□□□□□ -0.45
CLCN6-206ENST00000376496 MGAT4DA6NG13 374 aa12.24□□□□□ -0.45
CLCN6-206ENST00000376496 E7ENX8 843 aa12.24□□□□□ -0.45
CLCN6-206ENST00000376496 VARSP26640 1264 aaKnown RBP12.24□□□□□ -0.45
CLCN6-206ENST00000376496 ADSLP30566 484 aaPredicted RBP12.24□□□□□ -0.45
CLCN6-206ENST00000376496 AP1S2P56377 157 aa12.24□□□□□ -0.45
CLCN6-206ENST00000376496 CAPRIN1Q14444 709 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms