RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 SUN1O94901 812 aa12.7□□□□□ -0.38
CLCN6-205ENST00000376492 POLBP06746 335 aa12.7□□□□□ -0.38
CLCN6-205ENST00000376492 ETS1P14921 441 aa12.7□□□□□ -0.38
CLCN6-205ENST00000376492 MSH3P20585 1137 aa12.7□□□□□ -0.38
CLCN6-205ENST00000376492 ELAVL4P26378 380 aaKnown RBP12.7□□□□□ -0.38
CLCN6-205ENST00000376492 AKT1P31749 480 aa12.7□□□□□ -0.38
CLCN6-205ENST00000376492 PRKAA1Q13131 559 aa12.7□□□□□ -0.38
CLCN6-205ENST00000376492 MYBPC3Q14896 1274 aa12.7□□□□□ -0.38
CLCN6-205ENST00000376492 DCAF10Q5QP82 559 aa12.7□□□□□ -0.38
CLCN6-205ENST00000376492 LYPLAL1Q5VWZ2 237 aa12.7□□□□□ -0.38
CLCN6-205ENST00000376492 IGFL3Q6UXB1 125 aa12.7□□□□□ -0.38
CLCN6-205ENST00000376492 LINC00523Q86TU6 105 aa12.7□□□□□ -0.38
CLCN6-205ENST00000376492 GALNT16Q8N428 558 aa12.7□□□□□ -0.38
CLCN6-205ENST00000376492 CCDC89Q8N998 374 aa12.7□□□□□ -0.38
CLCN6-205ENST00000376492 CLEC1AQ8NC01 280 aa12.7□□□□□ -0.38
CLCN6-205ENST00000376492 OR4K2Q8NGD2 314 aa12.7□□□□□ -0.38
CLCN6-205ENST00000376492 MARVELD3Q96A59 401 aa12.7□□□□□ -0.38
CLCN6-205ENST00000376492 SLC7A5P2Q9GIP4 190 aa12.7□□□□□ -0.38
CLCN6-205ENST00000376492 ZNF552Q9H707 407 aaPredicted RBP12.7□□□□□ -0.38
CLCN6-205ENST00000376492 C1GALT1Q9NS00 363 aa12.7□□□□□ -0.38
CLCN6-205ENST00000376492 SMOXQ9NWM0 555 aa12.7□□□□□ -0.38
CLCN6-205ENST00000376492 CSAG2Q9Y5P2 127 aa12.7□□□□□ -0.38
CLCN6-205ENST00000376492 CROCCQ5TZA2 2017 aa12.7□□□□□ -0.38
CLCN6-205ENST00000376492 CSMD2Q7Z408 3487 aa12.7□□□□□ -0.38
CLCN6-205ENST00000376492 CTAGE15A4D2H0 777 aa12.69□□□□□ -0.38
CLCN6-205ENST00000376492 E7EQ34 232 aa12.69□□□□□ -0.38
CLCN6-205ENST00000376492 BTN3A3O00478 584 aa12.69□□□□□ -0.38
CLCN6-205ENST00000376492 BTN3A1O00481 513 aa12.69□□□□□ -0.38
CLCN6-205ENST00000376492 PRAMEF1O95521 474 aa12.69□□□□□ -0.38
CLCN6-205ENST00000376492 ALPPP05187 535 aa12.69□□□□□ -0.38
CLCN6-205ENST00000376492 ZSCAN5DPP0CG00 497 aa12.69□□□□□ -0.38
CLCN6-205ENST00000376492 CTAGE8P0CG41 777 aa12.69□□□□□ -0.38
CLCN6-205ENST00000376492 TPH1P17752 444 aa12.69□□□□□ -0.38
CLCN6-205ENST00000376492 PSMA3P25788 255 aa12.69□□□□□ -0.38
CLCN6-205ENST00000376492 RPL22P35268 128 aaKnown RBP12.69□□□□□ -0.38
CLCN6-205ENST00000376492 KCNJ1P48048 391 aa12.69□□□□□ -0.38
CLCN6-205ENST00000376492 GLRBP48167 497 aa12.69□□□□□ -0.38
CLCN6-205ENST00000376492 ZNF140P52738 457 aaPredicted RBP12.69□□□□□ -0.38
CLCN6-205ENST00000376492 ITGA9Q13797 1035 aa12.69□□□□□ -0.38
CLCN6-205ENST00000376492 KRT33BQ14525 404 aa12.69□□□□□ -0.38
CLCN6-205ENST00000376492 GLE1Q53GS7 698 aaKnown RBP12.69□□□□□ -0.38
CLCN6-205ENST00000376492 C1orf189Q5VU69 101 aa12.69□□□□□ -0.38
CLCN6-205ENST00000376492 MLIPQ5VWP3 458 aa12.69□□□□□ -0.38
CLCN6-205ENST00000376492 CDHR3Q6ZTQ4 885 aa12.69□□□□□ -0.38
CLCN6-205ENST00000376492 PRUNE1Q86TP1 453 aa12.69□□□□□ -0.38
CLCN6-205ENST00000376492 CTAGE6Q86UF2 777 aa12.69□□□□□ -0.38
CLCN6-205ENST00000376492 CTAGE4Q8IX94 777 aa12.69□□□□□ -0.38
CLCN6-205ENST00000376492 TAB3Q8N5C8 712 aaPredicted RBP12.69□□□□□ -0.38
CLCN6-205ENST00000376492 OR2L2Q8NH16 312 aa12.69□□□□□ -0.38
CLCN6-205ENST00000376492 ZNF398Q8TD17 642 aa12.69□□□□□ -0.38
CLCN6-205ENST00000376492 COG1Q8WTW3 980 aa12.69□□□□□ -0.38
CLCN6-205ENST00000376492 ZFPM2Q8WW38 1151 aa12.69□□□□□ -0.38
CLCN6-205ENST00000376492 MS4A14Q96JA4 679 aa12.69□□□□□ -0.38
CLCN6-205ENST00000376492 PITPNM3Q9BZ71 974 aa12.69□□□□□ -0.38
CLCN6-205ENST00000376492 SRMSQ9H3Y6 488 aa12.69□□□□□ -0.38
CLCN6-205ENST00000376492 RAB6BQ9NRW1 208 aa12.69□□□□□ -0.38
CLCN6-205ENST00000376492 ACSL5Q9ULC5 683 aa12.69□□□□□ -0.38
CLCN6-205ENST00000376492 PADI2Q9Y2J8 665 aa12.69□□□□□ -0.38
CLCN6-205ENST00000376492 PTRH2Q9Y3E5 179 aaKnown RBP12.69□□□□□ -0.38
CLCN6-205ENST00000376492 POLEQ07864 2286 aa12.68□□□□□ -0.38
CLCN6-205ENST00000376492 GOLGA6L10A0A0M3HER8 536 aa12.68□□□□□ -0.38
CLCN6-205ENST00000376492 AGAP14A8MT82 685 aa12.68□□□□□ -0.38
CLCN6-205ENST00000376492 E7EVH7 732 aa12.68□□□□□ -0.38
CLCN6-205ENST00000376492 E2F3O00716 465 aa12.68□□□□□ -0.38
CLCN6-205ENST00000376492 LRRTM2O43300 516 aa12.68□□□□□ -0.38
CLCN6-205ENST00000376492 SGTAO43765 313 aa12.68□□□□□ -0.38
CLCN6-205ENST00000376492 CNOT3O75175 753 aaKnown RBP12.68□□□□□ -0.38
CLCN6-205ENST00000376492 MSL3P1P0C860 447 aa12.68□□□□□ -0.38
CLCN6-205ENST00000376492 CBSLP0DN79 551 aa12.68□□□□□ -0.38
CLCN6-205ENST00000376492 AGXTP21549 392 aa12.68□□□□□ -0.38
CLCN6-205ENST00000376492 PRDX3P30048 256 aaKnown RBP12.68□□□□□ -0.38
CLCN6-205ENST00000376492 CBSP35520 551 aa12.68□□□□□ -0.38
CLCN6-205ENST00000376492 HADHAP40939 763 aa12.68□□□□□ -0.38
CLCN6-205ENST00000376492 XIAPP98170 497 aa12.68□□□□□ -0.38
CLCN6-205ENST00000376492 SLC9A5Q14940 896 aa12.68□□□□□ -0.38
CLCN6-205ENST00000376492 CYP1B1Q16678 543 aa12.68□□□□□ -0.38
CLCN6-205ENST00000376492 DEFB110Q30KQ9 67 aa12.68□□□□□ -0.38
CLCN6-205ENST00000376492 Q6ZS92 163 aa12.68□□□□□ -0.38
CLCN6-205ENST00000376492 GSTA5Q7RTV2 222 aa12.68□□□□□ -0.38
CLCN6-205ENST00000376492 ST6GALNAC3Q8NDV1 305 aa12.68□□□□□ -0.38
CLCN6-205ENST00000376492 ACVR1CQ8NER5 493 aa12.68□□□□□ -0.38
CLCN6-205ENST00000376492 LCN9Q8WX39 176 aa12.68□□□□□ -0.38
CLCN6-205ENST00000376492 FER1L6-AS2Q96M78 137 aa12.68□□□□□ -0.38
CLCN6-205ENST00000376492 TRAPPC9Q96Q05 1148 aa12.68□□□□□ -0.38
CLCN6-205ENST00000376492 DPH2Q9BQC3 489 aaPredicted RBP12.68□□□□□ -0.38
CLCN6-205ENST00000376492 DHRS4Q9BTZ2 278 aa12.68□□□□□ -0.38
CLCN6-205ENST00000376492 UNKQ9C0B0 810 aaKnown RBP12.68□□□□□ -0.38
CLCN6-205ENST00000376492 SYTL2Q9HCH5 934 aa12.68□□□□□ -0.38
CLCN6-205ENST00000376492 P4HTMQ9NXG6 502 aa12.68□□□□□ -0.38
CLCN6-205ENST00000376492 SERTAD3Q9UJW9 196 aa12.68□□□□□ -0.38
CLCN6-205ENST00000376492 COLEC10Q9Y6Z7 277 aa12.68□□□□□ -0.38
CLCN6-205ENST00000376492 SPTBP11277 2137 aa12.68□□□□□ -0.38
CLCN6-205ENST00000376492 APCP25054 2843 aa12.67□□□□□ -0.38
CLCN6-205ENST00000376492 MROH6A6NGR9 719 aa12.67□□□□□ -0.38
CLCN6-205ENST00000376492 H7C0S8 307 aa12.67□□□□□ -0.38
CLCN6-205ENST00000376492 MATN2O00339 956 aa12.67□□□□□ -0.38
CLCN6-205ENST00000376492 PEX12O00623 359 aa12.67□□□□□ -0.38
CLCN6-205ENST00000376492 HNRNPRO43390 633 aaKnown RBP12.67□□□□□ -0.38
CLCN6-205ENST00000376492 HCRTR1O43613 425 aa12.67□□□□□ -0.38
CLCN6-205ENST00000376492 SRP72O76094 671 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms