RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 OPTCQ9UBM4 332 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 SUN2Q9UH99 717 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 LEF1Q9UJU2 399 aaPredicted RBP13.67□□□□□ -0.22
MSH5-202ENST00000375740 PLXNB3Q9ULL4 1909 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 MKI67P46013 3256 aaKnown RBP13.67□□□□□ -0.22
MSH5-202ENST00000375740 ZNF701M0R085 212 aaPredicted RBP13.67□□□□□ -0.22
MSH5-202ENST00000375740 AQP9O43315 295 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 C1SP09871 688 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 G6PDP11413 515 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 MATN1P21941 496 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 POLR2IP36954 125 aaKnown RBP13.67□□□□□ -0.22
MSH5-202ENST00000375740 PIK3CGP48736 1102 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 NR6A1Q15406 480 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 AP5B1Q2VPB7 878 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 TTLL9Q3SXZ7 439 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 TIGD2Q4W5G0 525 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 RFTN2Q52LD8 501 aaPredicted RBP13.67□□□□□ -0.22
MSH5-202ENST00000375740 MBOAT1Q6ZNC8 495 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 IGFN1Q86VF2 1251 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 CBR4Q8N4T8 237 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 MRPL43Q8N983 215 aaKnown RBP13.67□□□□□ -0.22
MSH5-202ENST00000375740 NUDT8Q8WV74 236 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 TAMM41Q96BW9 452 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 ZNF641Q96N77 438 aaPredicted RBP13.67□□□□□ -0.22
MSH5-202ENST00000375740 EFHD1Q9BUP0 239 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 CEP44Q9C0F1 390 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 TDP1Q9NUW8 608 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 KCTD5Q9NXV2 234 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 B4GALT6Q9UBX8 382 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 CD84Q9UIB8 345 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 CFAP99D6REC4 459 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 TYRP14679 529 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 PTPN2P17706 415 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 CCR7P32248 378 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 RAB15P59190 212 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 RPS3AP61247 264 aaKnown RBP13.67□□□□□ -0.22
MSH5-202ENST00000375740 IFNEQ86WN2 208 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 STARD8Q92502 1023 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 ITPKCQ96DU7 683 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 UHRF1Q96T88 793 aaPredicted RBP13.67□□□□□ -0.22
MSH5-202ENST00000375740 TRIM54Q9BYV2 358 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 HEBP1Q9NRV9 189 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 MBD1Q9UIS9 605 aaPredicted RBP13.67□□□□□ -0.22
MSH5-202ENST00000375740 TMPRSS11EQ9UL52 423 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 INSL6Q9Y581 213 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 FFAR3O14843 346 aa13.66□□□□□ -0.22
MSH5-202ENST00000375740 GPR42O15529 346 aa13.66□□□□□ -0.22
MSH5-202ENST00000375740 CNOT3O75175 753 aaKnown RBP13.66□□□□□ -0.22
MSH5-202ENST00000375740 NFATC3Q12968 1075 aa13.66□□□□□ -0.22
MSH5-202ENST00000375740 PRKG2Q13237 762 aa13.66□□□□□ -0.22
MSH5-202ENST00000375740 AAK1Q2M2I8 961 aa13.66□□□□□ -0.22
MSH5-202ENST00000375740 PPP4R4Q6NUP7 873 aa13.66□□□□□ -0.22
MSH5-202ENST00000375740 GDPD4Q6W3E5 623 aa13.66□□□□□ -0.22
MSH5-202ENST00000375740 KCTD8Q6ZWB6 473 aa13.66□□□□□ -0.22
MSH5-202ENST00000375740 ADIPOR2Q86V24 386 aa13.66□□□□□ -0.22
MSH5-202ENST00000375740 ZFAND4Q86XD8 727 aa13.66□□□□□ -0.22
MSH5-202ENST00000375740 EPHX4Q8IUS5 362 aa13.66□□□□□ -0.22
MSH5-202ENST00000375740 SPHK2Q9NRA0 654 aa13.66□□□□□ -0.22
MSH5-202ENST00000375740 CCL27Q9Y4X3 112 aa13.66□□□□□ -0.22
MSH5-202ENST00000375740 IRAK3Q9Y616 596 aa13.66□□□□□ -0.22
MSH5-202ENST00000375740 MTCL1Q9Y4B5 1905 aaKnown RBP13.66□□□□□ -0.22
MSH5-202ENST00000375740 TPST1O60507 370 aa13.66□□□□□ -0.22
MSH5-202ENST00000375740 FGBP02675 491 aa13.66□□□□□ -0.22
MSH5-202ENST00000375740 RHOP08100 348 aa13.66□□□□□ -0.22
MSH5-202ENST00000375740 SLC2A4P14672 509 aa13.66□□□□□ -0.22
MSH5-202ENST00000375740 SPINT3P49223 89 aa13.66□□□□□ -0.22
MSH5-202ENST00000375740 GSK3BP49841 420 aa13.66□□□□□ -0.22
MSH5-202ENST00000375740 EPHA5P54756 1037 aa13.66□□□□□ -0.22
MSH5-202ENST00000375740 BNIP2Q12982 314 aa13.66□□□□□ -0.22
MSH5-202ENST00000375740 ARHGEF7Q14155 803 aa13.66□□□□□ -0.22
MSH5-202ENST00000375740 KCNJ8Q15842 424 aa13.66□□□□□ -0.22
MSH5-202ENST00000375740 LY6G5CQ5SRR4 150 aa13.66□□□□□ -0.22
MSH5-202ENST00000375740 DEPDC1Q5TB30 811 aa13.66□□□□□ -0.22
MSH5-202ENST00000375740 CYP20A1Q6UW02 462 aa13.66□□□□□ -0.22
MSH5-202ENST00000375740 DET1Q7L5Y6 550 aa13.66□□□□□ -0.22
MSH5-202ENST00000375740 KIAA2013Q8IYS2 634 aa13.66□□□□□ -0.22
MSH5-202ENST00000375740 CADM3Q8N126 398 aa13.66□□□□□ -0.22
MSH5-202ENST00000375740 NAT16Q8N8M0 369 aa13.66□□□□□ -0.22
MSH5-202ENST00000375740 OR2A12Q8NGT7 310 aa13.66□□□□□ -0.22
MSH5-202ENST00000375740 TMEM74Q96NL1 305 aa13.66□□□□□ -0.22
MSH5-202ENST00000375740 ACTL8Q9H568 366 aa13.66□□□□□ -0.22
MSH5-202ENST00000375740 SIAEQ9HAT2 523 aa13.66□□□□□ -0.22
MSH5-202ENST00000375740 RDH14Q9HBH5 336 aa13.66□□□□□ -0.22
MSH5-202ENST00000375740 FARSBQ9NSD9 589 aaKnown RBP13.66□□□□□ -0.22
MSH5-202ENST00000375740 CCM2LQ9NUG4 571 aaPredicted RBP13.66□□□□□ -0.22
MSH5-202ENST00000375740 ARMC1Q9NVT9 282 aa13.66□□□□□ -0.22
MSH5-202ENST00000375740 CXXC1Q9P0U4 656 aaPredicted RBP13.66□□□□□ -0.22
MSH5-202ENST00000375740 ACTR3BQ9P1U1 418 aa13.66□□□□□ -0.22
MSH5-202ENST00000375740 ITGB1BP2Q9UKP3 347 aa13.66□□□□□ -0.22
MSH5-202ENST00000375740 AQP12BA6NM10 295 aa13.65□□□□□ -0.22
MSH5-202ENST00000375740 LOC730098B7Z3J9 87 aa13.65□□□□□ -0.22
MSH5-202ENST00000375740 B4GAT1O43505 415 aa13.65□□□□□ -0.22
MSH5-202ENST00000375740 CBSLP0DN79 551 aa13.65□□□□□ -0.22
MSH5-202ENST00000375740 CBSP35520 551 aa13.65□□□□□ -0.22
MSH5-202ENST00000375740 NTHL1P78549 312 aa13.65□□□□□ -0.22
MSH5-202ENST00000375740 LIPEQ05469 1076 aa13.65□□□□□ -0.22
MSH5-202ENST00000375740 CRY1Q16526 586 aa13.65□□□□□ -0.22
MSH5-202ENST00000375740 PERM1Q5SV97 790 aa13.65□□□□□ -0.22
MSH5-202ENST00000375740 TMEM215Q68D42 235 aa13.65□□□□□ -0.22
MSH5-202ENST00000375740 THOC7Q6I9Y2 204 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms