RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 ITGB6P18564 788 aa13.82□□□□□ -0.2
CLCNKA-202ENST00000375692 PSMB9P28065 219 aa13.82□□□□□ -0.2
CLCNKA-202ENST00000375692 GJA8P48165 433 aa13.82□□□□□ -0.2
CLCNKA-202ENST00000375692 CATSPEREQ5SY80 951 aa13.82□□□□□ -0.2
CLCNKA-202ENST00000375692 GLB1LQ6UWU2 654 aa13.82□□□□□ -0.2
CLCNKA-202ENST00000375692 MILR1Q7Z6M3 343 aa13.82□□□□□ -0.2
CLCNKA-202ENST00000375692 TMCO2Q7Z6W1 182 aaPredicted RBP13.82□□□□□ -0.2
CLCNKA-202ENST00000375692 SLC22A16Q86VW1 577 aa13.82□□□□□ -0.2
CLCNKA-202ENST00000375692 AADATQ8N5Z0 425 aa13.82□□□□□ -0.2
CLCNKA-202ENST00000375692 SUSD3Q96L08 255 aa13.82□□□□□ -0.2
CLCNKA-202ENST00000375692 MYOCQ99972 504 aa13.82□□□□□ -0.2
CLCNKA-202ENST00000375692 RIBC2Q9H4K1 309 aa13.82□□□□□ -0.2
CLCNKA-202ENST00000375692 NSUN3Q9H649 340 aaKnown RBP13.82□□□□□ -0.2
CLCNKA-202ENST00000375692 DCAF13Q9NV06 445 aaKnown RBP13.82□□□□□ -0.2
CLCNKA-202ENST00000375692 TSC22D4Q9Y3Q8 395 aa13.82□□□□□ -0.2
CLCNKA-202ENST00000375692 GBF1Q92538 1859 aa13.82□□□□□ -0.2
CLCNKA-202ENST00000375692 A8MU76 341 aa13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 MYCLP1P12525 358 aaPredicted RBP13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 AKT1P31749 480 aa13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 MASP1P48740 699 aa13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 ILF2Q12905 390 aaKnown RBP13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 TUSC3Q13454 348 aa13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 TAF1AQ15573 450 aaPredicted RBP13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 TRIP4Q15650 581 aaPredicted RBP13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 MICU2Q8IYU8 434 aa13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 CHPFQ8IZ52 775 aa13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 LIX1Q8N485 282 aa13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 ATAD1Q8NBU5 361 aa13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 PIK3C3Q8NEB9 887 aa13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 OR6Q1Q8NGQ2 317 aa13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 UBE2FQ969M7 185 aa13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 ARMC5Q96C12 935 aa13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 ZBTB18Q99592 522 aa13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 PSD2Q9BQI7 771 aa13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 TRIT1Q9H3H1 467 aaKnown RBP13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 MAGEE1Q9HCI5 957 aa13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 TMEM45AQ9NWC5 275 aa13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 RIMKLBQ9ULI2 386 aa13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 PRG3Q9Y2Y8 225 aaPredicted RBP13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 SLC16A6O15403 523 aa13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 FADS2O95864 444 aaKnown RBP13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 EOMESO95936 686 aa13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 PGRP06401 933 aa13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 CCDC159P0C7I6 412 aa13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 MSH3P20585 1137 aa13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 HOXD9P28356 352 aaPredicted RBP13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 RYKP34925 604 aa13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 KCNQ1P51787 676 aa13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 TRAF3Q13114 568 aa13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 GBX1Q14549 363 aa13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 DGUOKQ16854 277 aa13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 RUNDC3AQ59EK9 446 aa13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 CARD16Q5EG05 197 aa13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 CES5AQ6NT32 575 aa13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 CEP68Q76N32 757 aa13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 PAGE2Q7Z2X7 111 aa13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 SLC7A5P1Q8MH63 180 aa13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 LGI2Q8N0V4 545 aa13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 S100ZQ8WXG8 99 aa13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 MTFMTQ96DP5 389 aaKnown RBP13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 YIPF6Q96EC8 236 aa13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 BTBD2Q9BX70 525 aa13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 DPY30Q9C005 99 aa13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 SCUBE2Q9NQ36 999 aa13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 PRDM8Q9NQV8 689 aa13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 RANBP2P49792 3224 aaKnown RBP13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 PATJQ8NI35 1801 aa13.81□□□□□ -0.2
CLCNKA-202ENST00000375692 IFRD1O00458 451 aaPredicted RBP13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 AREL1O15033 823 aa13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 SLC22A1O15245 554 aa13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 MYO1DO94832 1006 aa13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 DIRAS1O95057 198 aa13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 SCELO95171 688 aa13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 OXSR1O95747 527 aaPredicted RBP13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 C1QCP02747 245 aa13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 LPOP22079 712 aaPredicted RBP13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 ACVR2AP27037 513 aa13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 EPHA2P29317 976 aa13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 YBEYP58557 167 aaPredicted RBP13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 KCNJ8Q15842 424 aa13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 VARS2Q5ST30 1063 aaKnown RBP13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 AGAP7PQ5VUJ5 663 aa13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 PLEKHG7Q6ZR37 379 aa13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 P2RY8Q86VZ1 359 aa13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 ANKRD46Q86W74 232 aa13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 ZNF513Q8N8E2 541 aaPredicted RBP13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 DYNC2LI1Q8TCX1 351 aa13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 OR52E6Q96RD3 313 aa13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 TMEM39AQ9NV64 488 aa13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 ELOVL2Q9NXB9 296 aa13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 SCHIP1Q9P0W5 487 aaPredicted RBP13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 ORC6Q9Y5N6 252 aa13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 NUP214P35658 2090 aaPredicted RBP13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 MT-ND2P03891 347 aa13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 PABPC1P11940 636 aaKnown RBP13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 IGFBP5P24593 272 aa13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 TTPAP49638 278 aa13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 CLK3P49761 638 aaKnown RBP13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 CLCN7P51798 805 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms