RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 G3BP2Q9UN86 482 aaKnown RBP11.83□□□□□ -0.52
LSM2-208ENST00000375661 FARSAQ9Y285 508 aaKnown RBP11.83□□□□□ -0.52
LSM2-208ENST00000375661 MAD1L1Q9Y6D9 718 aa11.83□□□□□ -0.52
LSM2-208ENST00000375661 RP1L1Q8IWN7 2480 aaPredicted RBP11.82□□□□□ -0.52
LSM2-208ENST00000375661 GOLGA8KD6RF30 607 aa11.82□□□□□ -0.52
LSM2-208ENST00000375661 GOLGA8TH3BQL2 631 aa11.82□□□□□ -0.52
LSM2-208ENST00000375661 CPNE3O75131 537 aaKnown RBP11.82□□□□□ -0.52
LSM2-208ENST00000375661 USP1O94782 785 aa11.82□□□□□ -0.52
LSM2-208ENST00000375661 VAPBO95292 243 aa11.82□□□□□ -0.52
LSM2-208ENST00000375661 PGAM1P18669 254 aa11.82□□□□□ -0.52
LSM2-208ENST00000375661 HALP42357 657 aa11.82□□□□□ -0.52
LSM2-208ENST00000375661 CARSP49589 748 aaKnown RBP11.82□□□□□ -0.52
LSM2-208ENST00000375661 CCL11P51671 97 aa11.82□□□□□ -0.52
LSM2-208ENST00000375661 PRAMEP78395 509 aa11.82□□□□□ -0.52
LSM2-208ENST00000375661 TMEM115Q12893 351 aaPredicted RBP11.82□□□□□ -0.52
LSM2-208ENST00000375661 SEPT7Q16181 437 aaKnown RBP11.82□□□□□ -0.52
LSM2-208ENST00000375661 DBN1Q16643 649 aa11.82□□□□□ -0.52
LSM2-208ENST00000375661 PLA2G4EQ3MJ16 856 aa11.82□□□□□ -0.52
LSM2-208ENST00000375661 LDLRAP1Q5SW96 308 aa11.82□□□□□ -0.52
LSM2-208ENST00000375661 TEX35Q5T0J7 233 aa11.82□□□□□ -0.52
LSM2-208ENST00000375661 AFTPHQ6ULP2 937 aa11.82□□□□□ -0.52
LSM2-208ENST00000375661 ZNF517Q6ZMY9 492 aaPredicted RBP11.82□□□□□ -0.52
LSM2-208ENST00000375661 CENPUQ71F23 418 aa11.82□□□□□ -0.52
LSM2-208ENST00000375661 MAMDC2Q7Z304 686 aaPredicted RBP11.82□□□□□ -0.52
LSM2-208ENST00000375661 SERPINA9Q86WD7 417 aa11.82□□□□□ -0.52
LSM2-208ENST00000375661 ANKMY2Q8IV38 441 aa11.82□□□□□ -0.52
LSM2-208ENST00000375661 ZNF547Q8IVP9 402 aa11.82□□□□□ -0.52
LSM2-208ENST00000375661 CARFQ8N187 725 aa11.82□□□□□ -0.52
LSM2-208ENST00000375661 GDAP1Q8TB36 358 aa11.82□□□□□ -0.52
LSM2-208ENST00000375661 ULK4Q96C45 1275 aa11.82□□□□□ -0.52
LSM2-208ENST00000375661 LRRC39Q96DD0 335 aa11.82□□□□□ -0.52
LSM2-208ENST00000375661 RNF31Q96EP0 1072 aa11.82□□□□□ -0.52
LSM2-208ENST00000375661 LRFN5Q96NI6 719 aa11.82□□□□□ -0.52
LSM2-208ENST00000375661 IL1RAPL1Q9NZN1 696 aa11.82□□□□□ -0.52
LSM2-208ENST00000375661 MARCH4Q9P2E8 410 aaPredicted RBP11.82□□□□□ -0.52
LSM2-208ENST00000375661 CHMP2BQ9UQN3 213 aa11.82□□□□□ -0.52
LSM2-208ENST00000375661 DNAJC16Q9Y2G8 782 aa11.82□□□□□ -0.52
LSM2-208ENST00000375661 FAM169AQ9Y6X4 670 aa11.82□□□□□ -0.52
LSM2-208ENST00000375661 HIVEP3Q5T1R4 2406 aa11.81□□□□□ -0.52
LSM2-208ENST00000375661 NOTCH2Q04721 2471 aa11.81□□□□□ -0.52
LSM2-208ENST00000375661 IGLV3-16A0A075B6K0 115 aa11.81□□□□□ -0.52
LSM2-208ENST00000375661 IGHV5-51A0A0C4DH38 117 aa11.81□□□□□ -0.52
LSM2-208ENST00000375661 WIPF3A6NGB9 483 aa11.81□□□□□ -0.52
LSM2-208ENST00000375661 TLCD2A6NGC4 264 aa11.81□□□□□ -0.52
LSM2-208ENST00000375661 ARGFXA6NJG6 315 aa11.81□□□□□ -0.52
LSM2-208ENST00000375661 OR52A4PA6NMU1 304 aa11.81□□□□□ -0.52
LSM2-208ENST00000375661 TCP11X1B4DZS4 312 aa11.81□□□□□ -0.52
LSM2-208ENST00000375661 EIF3HO15372 352 aaKnown RBP eCLIP11.81□□□□□ -0.52
LSM2-208ENST00000375661 CDK14O94921 469 aa11.81□□□□□ -0.52
LSM2-208ENST00000375661 SLU7O95391 586 aaKnown RBP11.81□□□□□ -0.52
LSM2-208ENST00000375661 KLK3P07288 261 aaPredicted RBP11.81□□□□□ -0.52
LSM2-208ENST00000375661 FOLR1P15328 257 aa11.81□□□□□ -0.52
LSM2-208ENST00000375661 ACRV1P26436 265 aa11.81□□□□□ -0.52
LSM2-208ENST00000375661 RPL10P27635 214 aaKnown RBP11.81□□□□□ -0.52
LSM2-208ENST00000375661 ARL4DP49703 201 aa11.81□□□□□ -0.52
LSM2-208ENST00000375661 CTSCP53634 463 aa11.81□□□□□ -0.52
LSM2-208ENST00000375661 HSD11B2P80365 405 aa11.81□□□□□ -0.52
LSM2-208ENST00000375661 IL10RAQ13651 578 aa11.81□□□□□ -0.52
LSM2-208ENST00000375661 GTF2H3Q13889 308 aa11.81□□□□□ -0.52
LSM2-208ENST00000375661 CRYMQ14894 314 aa11.81□□□□□ -0.52
LSM2-208ENST00000375661 CPZQ66K79 652 aa11.81□□□□□ -0.52
LSM2-208ENST00000375661 STEAP4Q687X5 459 aa11.81□□□□□ -0.52
LSM2-208ENST00000375661 JMJD6Q6NYC1 403 aaPredicted RBP11.81□□□□□ -0.52
LSM2-208ENST00000375661 UNC5AQ6ZN44 842 aa11.81□□□□□ -0.52
LSM2-208ENST00000375661 TAS2R42Q7RTR8 314 aa11.81□□□□□ -0.52
LSM2-208ENST00000375661 C11orf96Q7Z7L8 435 aa11.81□□□□□ -0.52
LSM2-208ENST00000375661 D2HGDHQ8N465 521 aa11.81□□□□□ -0.52
LSM2-208ENST00000375661 RASGEF1AQ8N9B8 481 aa11.81□□□□□ -0.52
LSM2-208ENST00000375661 FBXO36Q8NEA4 188 aa11.81□□□□□ -0.52
LSM2-208ENST00000375661 NAT14Q8WUY8 206 aa11.81□□□□□ -0.52
LSM2-208ENST00000375661 IFT81Q8WYA0 676 aa11.81□□□□□ -0.52
LSM2-208ENST00000375661 PNPLA2Q96AD5 504 aa11.81□□□□□ -0.52
LSM2-208ENST00000375661 NAT9Q9BTE0 207 aa11.81□□□□□ -0.52
LSM2-208ENST00000375661 SAYSD1Q9NPB0 183 aa11.81□□□□□ -0.52
LSM2-208ENST00000375661 SLAMF7Q9NQ25 335 aa11.81□□□□□ -0.52
LSM2-208ENST00000375661 LATS2Q9NRM7 1088 aa11.81□□□□□ -0.52
LSM2-208ENST00000375661 FGF21Q9NSA1 209 aa11.81□□□□□ -0.52
LSM2-208ENST00000375661 CATSPERZQ9NTU4 200 aa11.81□□□□□ -0.52
LSM2-208ENST00000375661 ZDHHC3Q9NYG2 299 aa11.81□□□□□ -0.52
LSM2-208ENST00000375661 ZC3H7BQ9UGR2 993 aaKnown RBP11.81□□□□□ -0.52
LSM2-208ENST00000375661 CREBBPQ92793 2442 aa11.8□□□□□ -0.52
LSM2-208ENST00000375661 CD3EAPO15446 510 aaKnown RBP11.8□□□□□ -0.52
LSM2-208ENST00000375661 SGTAO43765 313 aa11.8□□□□□ -0.52
LSM2-208ENST00000375661 TTC4O95801 387 aa11.8□□□□□ -0.52
LSM2-208ENST00000375661 POLBP06746 335 aa11.8□□□□□ -0.52
LSM2-208ENST00000375661 RAB40ALP0C0E4 278 aa11.8□□□□□ -0.52
LSM2-208ENST00000375661 RNF224P0DH78 156 aa11.8□□□□□ -0.52
LSM2-208ENST00000375661 PAMP19021 973 aa11.8□□□□□ -0.52
LSM2-208ENST00000375661 RPS18P62269 152 aaKnown RBP11.8□□□□□ -0.52
LSM2-208ENST00000375661 TUBB4BP68371 445 aa11.8□□□□□ -0.52
LSM2-208ENST00000375661 DMPKQ09013 629 aa11.8□□□□□ -0.52
LSM2-208ENST00000375661 ITIH4Q14624 930 aa11.8□□□□□ -0.52
LSM2-208ENST00000375661 LONRF1Q17RB8 773 aa11.8□□□□□ -0.52
LSM2-208ENST00000375661 FASTKD1Q53R41 847 aaKnown RBP11.8□□□□□ -0.52
LSM2-208ENST00000375661 SPANXN3Q5MJ09 141 aa11.8□□□□□ -0.52
LSM2-208ENST00000375661 NEPROQ6NW34 567 aa11.8□□□□□ -0.52
LSM2-208ENST00000375661 FAM199XQ6PEV8 388 aaPredicted RBP11.8□□□□□ -0.52
LSM2-208ENST00000375661 MED25Q71SY5 747 aa11.8□□□□□ -0.52
LSM2-208ENST00000375661 LDB1Q86U70 411 aaPredicted RBP11.8□□□□□ -0.52
LSM2-208ENST00000375661 ZBED8Q8IZ13 594 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms