RNA–Protein interactions for RNA: ENST00000375608.7

MCF2L-204, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 3,648 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-204ENST00000375608 TEKT2Q9UIF3 430 aa13.46□□□□□ -0.25
MCF2L-204ENST00000375608 ERVK-11Q9UQG0 969 aa13.46□□□□□ -0.25
MCF2L-204ENST00000375608 RAI2Q9Y5P3 530 aa13.46□□□□□ -0.25
MCF2L-204ENST00000375608 TCRBV5S2A0A599 114 aa13.46□□□□□ -0.25
MCF2L-204ENST00000375608 MUSKO15146 869 aa13.46□□□□□ -0.25
MCF2L-204ENST00000375608 SCELO95171 688 aa13.46□□□□□ -0.25
MCF2L-204ENST00000375608 ALPIP09923 528 aa13.46□□□□□ -0.25
MCF2L-204ENST00000375608 C7P10643 843 aa13.46□□□□□ -0.25
MCF2L-204ENST00000375608 COX7A2P14406 83 aa13.46□□□□□ -0.25
MCF2L-204ENST00000375608 HOXB8P17481 243 aaPredicted RBP13.46□□□□□ -0.25
MCF2L-204ENST00000375608 TNFRSF1BP20333 461 aa13.46□□□□□ -0.25
MCF2L-204ENST00000375608 CD40LGP29965 261 aa13.46□□□□□ -0.25
MCF2L-204ENST00000375608 SOAT1P35610 550 aa13.46□□□□□ -0.25
MCF2L-204ENST00000375608 IFITM3Q01628 133 aa13.46□□□□□ -0.25
MCF2L-204ENST00000375608 SMARCB1Q12824 385 aa13.46□□□□□ -0.25
MCF2L-204ENST00000375608 CSTF3Q12996 717 aaKnown RBP13.46□□□□□ -0.25
MCF2L-204ENST00000375608 UBXN11Q5T124 520 aa13.46□□□□□ -0.25
MCF2L-204ENST00000375608 TRIM48Q8IWZ4 208 aa13.46□□□□□ -0.25
MCF2L-204ENST00000375608 GTPBP3Q969Y2 492 aaKnown RBP13.46□□□□□ -0.25
MCF2L-204ENST00000375608 TTYH2Q9BSA4 534 aa13.46□□□□□ -0.25
MCF2L-204ENST00000375608 RAPGEFL1Q9UHV5 662 aa13.46□□□□□ -0.25
MCF2L-204ENST00000375608 SLCO3A1Q9UIG8 710 aa13.46□□□□□ -0.25
MCF2L-204ENST00000375608 KLHL20Q9Y2M5 609 aa13.46□□□□□ -0.25
MCF2L-204ENST00000375608 WBP11Q9Y2W2 641 aaKnown RBP13.46□□□□□ -0.25
MCF2L-204ENST00000375608 GNG14A0A1W2PPG7 69 aa13.46□□□□□ -0.26
MCF2L-204ENST00000375608 KRT87PA6NCN2 255 aa13.46□□□□□ -0.26
MCF2L-204ENST00000375608 SYNDIG1LA6NDD5 238 aa13.46□□□□□ -0.26
MCF2L-204ENST00000375608 CSF2P04141 144 aa13.46□□□□□ -0.26
MCF2L-204ENST00000375608 GADD45AP24522 165 aa13.46□□□□□ -0.26
MCF2L-204ENST00000375608 PBX3P40426 434 aa13.46□□□□□ -0.26
MCF2L-204ENST00000375608 PRIM2P49643 509 aa13.46□□□□□ -0.26
MCF2L-204ENST00000375608 OR2B6P58173 313 aa13.46□□□□□ -0.26
MCF2L-204ENST00000375608 RHOAP61586 193 aa13.46□□□□□ -0.26
MCF2L-204ENST00000375608 RFX4Q33E94 735 aa13.46□□□□□ -0.26
MCF2L-204ENST00000375608 DEPDC1Q5TB30 811 aa13.46□□□□□ -0.26
MCF2L-204ENST00000375608 GPR142Q7Z601 462 aa13.46□□□□□ -0.26
MCF2L-204ENST00000375608 MON1AQ86VX9 555 aa13.46□□□□□ -0.26
MCF2L-204ENST00000375608 KCNN1Q92952 543 aa13.46□□□□□ -0.26
MCF2L-204ENST00000375608 INPP5KQ9BT40 448 aa13.46□□□□□ -0.26
MCF2L-204ENST00000375608 NUSAP1Q9BXS6 441 aaKnown RBP13.46□□□□□ -0.26
MCF2L-204ENST00000375608 DERL2Q9GZP9 239 aa13.46□□□□□ -0.26
MCF2L-204ENST00000375608 TRPV5Q9NQA5 729 aa13.46□□□□□ -0.26
MCF2L-204ENST00000375608 AGO1Q9UL18 857 aaKnown RBP13.46□□□□□ -0.26
MCF2L-204ENST00000375608 VPS9D1Q9Y2B5 631 aa13.46□□□□□ -0.26
MCF2L-204ENST00000375608 PCDHGA3Q9Y5H0 932 aa13.46□□□□□ -0.26
MCF2L-204ENST00000375608 COL1A2P08123 1366 aa13.46□□□□□ -0.26
MCF2L-204ENST00000375608 KNL1Q8NG31 2342 aa13.46□□□□□ -0.26
MCF2L-204ENST00000375608 NT5C1B-RDH14C9J2C7 533 aa13.45□□□□□ -0.26
MCF2L-204ENST00000375608 SLC26A3P40879 764 aa13.45□□□□□ -0.26
MCF2L-204ENST00000375608 CRATP43155 626 aa13.45□□□□□ -0.26
MCF2L-204ENST00000375608 PHKG1Q16816 387 aa13.45□□□□□ -0.26
MCF2L-204ENST00000375608 INO80DQ53TQ3 878 aaPredicted RBP13.45□□□□□ -0.26
MCF2L-204ENST00000375608 OR2T5Q6IEZ7 315 aa13.45□□□□□ -0.26
MCF2L-204ENST00000375608 UBR3Q6ZT12 1888 aa13.45□□□□□ -0.26
MCF2L-204ENST00000375608 OR2T29Q8NH02 315 aa13.45□□□□□ -0.26
MCF2L-204ENST00000375608 C17orf50Q8WW18 174 aa13.45□□□□□ -0.26
MCF2L-204ENST00000375608 OTULINQ96BN8 352 aa13.45□□□□□ -0.26
MCF2L-204ENST00000375608 ALOXE3Q9BYJ1 711 aa13.45□□□□□ -0.26
MCF2L-204ENST00000375608 MRM3Q9HC36 420 aaKnown RBP13.45□□□□□ -0.26
MCF2L-204ENST00000375608 AASDHPPTQ9NRN7 309 aa13.45□□□□□ -0.26
MCF2L-204ENST00000375608 TBC1D14Q9P2M4 693 aa13.45□□□□□ -0.26
MCF2L-204ENST00000375608 SPASTQ9UBP0 616 aa13.45□□□□□ -0.26
MCF2L-204ENST00000375608 GTF2IRD1Q9UHL9 959 aa13.45□□□□□ -0.26
MCF2L-204ENST00000375608 TNPO3Q9Y5L0 923 aaKnown RBP13.45□□□□□ -0.26
MCF2L-204ENST00000375608 EPN2O95208 641 aa13.45□□□□□ -0.26
MCF2L-204ENST00000375608 ADAMTSL2Q86TH1 951 aa13.45□□□□□ -0.26
MCF2L-204ENST00000375608 RGL4Q8IZJ4 473 aa13.45□□□□□ -0.26
MCF2L-204ENST00000375608 CAMKK1Q8N5S9 505 aa13.45□□□□□ -0.26
MCF2L-204ENST00000375608 TTC9BQ8N6N2 239 aa13.45□□□□□ -0.26
MCF2L-204ENST00000375608 BPIFB1Q8TDL5 484 aa13.45□□□□□ -0.26
MCF2L-204ENST00000375608 ITPKCQ96DU7 683 aa13.45□□□□□ -0.26
MCF2L-204ENST00000375608 DUS3LQ96G46 650 aaKnown RBP13.45□□□□□ -0.26
MCF2L-204ENST00000375608 ADGRE3Q9BY15 652 aa13.45□□□□□ -0.26
MCF2L-204ENST00000375608 MAF1Q9H063 256 aa13.45□□□□□ -0.26
MCF2L-204ENST00000375608 TLR8Q9NR97 1041 aaKnown RBP13.45□□□□□ -0.26
MCF2L-204ENST00000375608 CPNE6O95741 557 aa13.45□□□□□ -0.26
MCF2L-204ENST00000375608 OR1E2P47887 323 aa13.45□□□□□ -0.26
MCF2L-204ENST00000375608 HIST2H2ACQ16777 129 aaPredicted RBP13.45□□□□□ -0.26
MCF2L-204ENST00000375608 ATXN7L2Q5T6C5 722 aaPredicted RBP13.45□□□□□ -0.26
MCF2L-204ENST00000375608 FAM171A1Q5VUB5 890 aa13.45□□□□□ -0.26
MCF2L-204ENST00000375608 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.45□□□□□ -0.26
MCF2L-204ENST00000375608 NEK10Q6ZWH5 1172 aa13.45□□□□□ -0.26
MCF2L-204ENST00000375608 SCD5Q86SK9 330 aa13.45□□□□□ -0.26
MCF2L-204ENST00000375608 PGBD5Q8N414 524 aa13.45□□□□□ -0.26
MCF2L-204ENST00000375608 AADATQ8N5Z0 425 aa13.45□□□□□ -0.26
MCF2L-204ENST00000375608 OR6Q1Q8NGQ2 317 aa13.45□□□□□ -0.26
MCF2L-204ENST00000375608 PYURFQ96I23 114 aa13.45□□□□□ -0.26
MCF2L-204ENST00000375608 EGLN2Q96KS0 407 aa13.45□□□□□ -0.26
MCF2L-204ENST00000375608 ACBD6Q9BR61 282 aa13.45□□□□□ -0.26
MCF2L-204ENST00000375608 RNF6Q9Y252 685 aa13.45□□□□□ -0.26
MCF2L-204ENST00000375608 RBBP6Q7Z6E9 1792 aaKnown RBP13.45□□□□□ -0.26
MCF2L-204ENST00000375608 CNTRLQ7Z7A1 2325 aa13.44□□□□□ -0.26
MCF2L-204ENST00000375608 FABP3P05413 133 aa13.44□□□□□ -0.26
MCF2L-204ENST00000375608 ZNF7P17097 686 aaPredicted RBP13.44□□□□□ -0.26
MCF2L-204ENST00000375608 CTSKP43235 329 aa13.44□□□□□ -0.26
MCF2L-204ENST00000375608 PPP5CP53041 499 aa13.44□□□□□ -0.26
MCF2L-204ENST00000375608 RPS14P62263 151 aaKnown RBP13.44□□□□□ -0.26
MCF2L-204ENST00000375608 RPP38P78345 283 aaKnown RBP13.44□□□□□ -0.26
MCF2L-204ENST00000375608 PLEKHH3Q7Z736 793 aa13.44□□□□□ -0.26
MCF2L-204ENST00000375608 B3GNT8Q7Z7M8 397 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms