RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 LRRC14BA6NHZ5 514 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 WNT7AO00755 349 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 THPOP40225 353 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 GSTM4Q03013 218 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 HEBP2Q9Y5Z4 205 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 MT-ND2P03891 347 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 IRF1P10914 325 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 PSD4Q8NDX1 1056 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 CANT1Q8WVQ1 401 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 PPP1R14AQ96A00 147 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 SGK2Q9HBY8 427 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 A0A1B0GVM2 712 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 TCAF2A6NFQ2 919 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 ECHS1P30084 290 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 HSPA14Q0VDF9 509 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 MFSD10Q14728 455 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 LDLRAP1Q5SW96 308 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 GATA6Q92908 595 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 S100A16Q96FQ6 103 aaKnown RBP10□□□□□ -0.81
PTCH1-204ENST00000375290 NAP1L6A6NFF2 107 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 K7EPI3 171 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 VTNP04004 478 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 SOX9P48436 509 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 RAB39AQ14964 217 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 PPP1R26Q5T8A7 1209 aaPredicted RBP10□□□□□ -0.81
PTCH1-204ENST00000375290 DCAF12L1Q5VU92 463 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 GARNL3Q5VVW2 1013 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 FBXL19Q6PCT2 694 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 SYN3O14994 580 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 SNNO75324 88 aaPredicted RBP10□□□□□ -0.81
PTCH1-204ENST00000375290 RCBTB2O95199 551 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 EBLN1P0CF75 366 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 DGKGP49619 791 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 TLDC1Q6P9B6 456 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 ATCAYQ86WG3 371 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 SCML4Q8N228 414 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 ACER1Q8TDN7 264 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 TMEM165Q9HC07 324 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 PCDHB16Q9NRJ7 776 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 PIP5K1BO14986 540 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 OAZ2O95190 189 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 PGLSO95336 258 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 STXBP1P61764 594 aaKnown RBP10□□□□□ -0.81
PTCH1-204ENST00000375290 FASTKD3Q14CZ7 662 aaKnown RBP10□□□□□ -0.81
PTCH1-204ENST00000375290 SLC30A10Q6XR72 485 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 ELMOD2Q8IZ81 293 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 OSTF1Q92882 214 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 TMEM168Q9H0V1 697 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 ZNF639Q9UID6 485 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 OR2AG2A6NM03 316 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 MFSD11O43934 449 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 MATN4O95460 622 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 LGALS2P05162 132 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 ELOAQ14241 798 aaKnown RBP9.99□□□□□ -0.81
PTCH1-204ENST00000375290 PCLAFQ15004 111 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 CRTC2Q53ET0 693 aaPredicted RBP9.99□□□□□ -0.81
PTCH1-204ENST00000375290 TMBIM1Q969X1 311 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 ACDQ96AP0 544 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 FCRL2Q96LA5 508 aaPredicted RBP9.99□□□□□ -0.81
PTCH1-204ENST00000375290 DUSP26Q9BV47 211 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 GPN2Q9H9Y4 310 aaPredicted RBP9.99□□□□□ -0.81
PTCH1-204ENST00000375290 TCF7L1Q9HCS4 588 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 LAMB4A4D0S4 1761 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 LRRN3E7EW58 273 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 RETP07949 1114 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 SAGP10523 405 aaPredicted RBP9.99□□□□□ -0.81
PTCH1-204ENST00000375290 ORC1Q13415 861 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 PIGGQ5H8A4 983 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 UBE2R2Q712K3 238 aaPredicted RBP9.99□□□□□ -0.81
PTCH1-204ENST00000375290 DAW1Q8N136 415 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 TPK1Q9H3S4 243 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 LRRN3Q9H3W5 708 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 HCN4Q9Y3Q4 1203 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 ACTA2P62736 377 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 ACTG2P63267 376 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 ITPK1Q13572 414 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 GPR162Q16538 588 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 SEZ6Q53EL9 994 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 DENND6BQ8NEG7 585 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 CHRAC1Q9NRG0 131 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 ADARB2Q9NS39 739 aaKnown RBP9.99□□□□□ -0.81
PTCH1-204ENST00000375290 BTRCQ9Y297 605 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 CCL15-CCL14A0A0B4J2E2 113 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 CLCA1A8K7I4 914 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 ENDOUP21128 410 aaKnown RBP9.99□□□□□ -0.81
PTCH1-204ENST00000375290 CYCSP99999 105 aaKnown RBP9.99□□□□□ -0.81
PTCH1-204ENST00000375290 CCL15Q16663 113 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 FAM76BQ5HYJ3 339 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 TMEM214Q6NUQ4 689 aaKnown RBP9.99□□□□□ -0.81
PTCH1-204ENST00000375290 FAM98AQ8NCA5 519 aaKnown RBP9.99□□□□□ -0.81
PTCH1-204ENST00000375290 KCNN1Q92952 543 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 NUDT15Q9NV35 164 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 OR2AT4A6NND4 320 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 PI15O43692 258 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 GMFGO60234 142 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 KAT7O95251 611 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 GKN3PP0CG01 181 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 ITGB5P18084 799 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 ARL2P36404 184 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 PSEN2P49810 448 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms