RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 SLC16A5O15375 505 aa8.04□□□□□ -1.12
UBR4-202ENST00000375224 EEDO75530 441 aaKnown RBP8.04□□□□□ -1.12
UBR4-202ENST00000375224 AP2A2O94973 939 aa8.04□□□□□ -1.12
UBR4-202ENST00000375224 HIST1H2AGP0C0S8 130 aaPredicted RBP8.04□□□□□ -1.12
UBR4-202ENST00000375224 EBLN1P0CF75 366 aa8.04□□□□□ -1.12
UBR4-202ENST00000375224 HSD17B1P14061 328 aa8.04□□□□□ -1.12
UBR4-202ENST00000375224 EPB42P16452 691 aa8.04□□□□□ -1.12
UBR4-202ENST00000375224 HIST1H2ADP20671 130 aa8.04□□□□□ -1.12
UBR4-202ENST00000375224 PEX2P28328 305 aa8.04□□□□□ -1.12
UBR4-202ENST00000375224 HSPA7P48741 367 aa8.04□□□□□ -1.12
UBR4-202ENST00000375224 POLR2JP52435 117 aaKnown RBP8.04□□□□□ -1.12
UBR4-202ENST00000375224 NME5P56597 212 aa8.04□□□□□ -1.12
UBR4-202ENST00000375224 PRKG2Q13237 762 aa8.04□□□□□ -1.12
UBR4-202ENST00000375224 RCAN2Q14206 197 aa8.04□□□□□ -1.12
UBR4-202ENST00000375224 LPCAT4Q643R3 524 aa8.04□□□□□ -1.12
UBR4-202ENST00000375224 ZCCHC8Q6NZY4 707 aaKnown RBP8.04□□□□□ -1.12
UBR4-202ENST00000375224 LETMD1Q6P1Q0 360 aa8.04□□□□□ -1.12
UBR4-202ENST00000375224 TMC5Q6UXY8 1006 aa8.04□□□□□ -1.12
UBR4-202ENST00000375224 CELF5Q8N6W0 485 aaKnown RBP8.04□□□□□ -1.12
UBR4-202ENST00000375224 TRIML2Q8N7C3 387 aa8.04□□□□□ -1.12
UBR4-202ENST00000375224 OR52B6Q8NGF0 335 aa8.04□□□□□ -1.12
UBR4-202ENST00000375224 HIST1H2AHQ96KK5 128 aa8.04□□□□□ -1.12
UBR4-202ENST00000375224 MAGEB10Q96LZ2 347 aaPredicted RBP8.04□□□□□ -1.12
UBR4-202ENST00000375224 HIST1H2AJQ99878 128 aa8.04□□□□□ -1.12
UBR4-202ENST00000375224 H2AFJQ9BTM1 129 aa8.04□□□□□ -1.12
UBR4-202ENST00000375224 NTMT1Q9BV86 223 aa8.04□□□□□ -1.12
UBR4-202ENST00000375224 NSUN3Q9H649 340 aaKnown RBP8.04□□□□□ -1.12
UBR4-202ENST00000375224 HEBP1Q9NRV9 189 aa8.04□□□□□ -1.12
UBR4-202ENST00000375224 CXXC1Q9P0U4 656 aaPredicted RBP8.04□□□□□ -1.12
UBR4-202ENST00000375224 GIMAP2Q9UG22 337 aa8.04□□□□□ -1.12
UBR4-202ENST00000375224 AP4S1Q9Y587 144 aa8.04□□□□□ -1.12
UBR4-202ENST00000375224 MYOFQ9NZM1 2061 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 PIKFYVEQ9Y2I7 2098 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 LOC105371267A0A1B0GV96 52 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 PRORSD1PA6NEY8 169 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 TAPBPO15533 448 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 STK16O75716 305 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 ATP1B2P14415 290 aaPredicted RBP8.03□□□□□ -1.12
UBR4-202ENST00000375224 CAPN3P20807 821 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 LHCGRP22888 699 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 WEE1P30291 646 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 SLC7A1P30825 629 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 MSX2P35548 267 aaPredicted RBP8.03□□□□□ -1.12
UBR4-202ENST00000375224 CHN2P52757 468 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 DIO3P55073 304 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 C21orf59P57076 290 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 TRAF3Q13114 568 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 SP140Q13342 867 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 EML3Q32P44 896 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 NIPAL1Q6NVV3 410 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 RETREG3Q86VR2 466 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 CHST14Q8NCH0 376 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 VOPP1Q96AW1 172 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 LRRC58Q96CX6 371 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 ACOX2Q99424 681 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 SPOCK3Q9BQ16 436 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 SLC29A3Q9BZD2 475 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 GRIP2Q9C0E4 1043 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 LINC00597Q9H2U6 94 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 FAM83DQ9H4H8 585 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 MAP10Q9P2G4 905 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 TSR3Q9UJK0 312 aaKnown RBP8.03□□□□□ -1.12
UBR4-202ENST00000375224 CNOT11Q9UKZ1 510 aaKnown RBP8.03□□□□□ -1.12
UBR4-202ENST00000375224 EIF3LQ9Y262 564 aaKnown RBP8.03□□□□□ -1.12
UBR4-202ENST00000375224 ST14Q9Y5Y6 855 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 TCRBV3S1A0A5B6 114 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 AQP12BA6NM10 295 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 UPK3BL1B0FP48 263 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 UPK3BL2E5RIL1 263 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 NUAK1O60285 661 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 FOXD2O60548 495 aaPredicted RBP8.03□□□□□ -1.12
UBR4-202ENST00000375224 RNASEH1O60930 286 aaKnown RBP8.03□□□□□ -1.12
UBR4-202ENST00000375224 GUCY1B2O75343 617 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 TFPTP0C1Z6 253 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 IL32P24001 234 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 AOAHP28039 575 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 AKT1P31749 480 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 CA5AP35218 305 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 HNMTP50135 292 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 BLVRAP53004 296 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 ST8SIA6P61647 398 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 CTAG1AP78358 180 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 NFYCQ13952 458 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 NR6A1Q15406 480 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 LRRC36Q1X8D7 754 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 Q6ZSR9 355 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 LRRC70Q7Z2Q7 622 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 AQP12AQ8IXF9 295 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 RAVER1Q8IY67 606 aaKnown RBP8.03□□□□□ -1.12
UBR4-202ENST00000375224 LINC00469Q8N7U9 141 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 ZBTB18Q99592 522 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 OSBPL6Q9BZF3 934 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 COPS7BQ9H9Q2 264 aaPredicted RBP8.03□□□□□ -1.12
UBR4-202ENST00000375224 C8orf4Q9NR00 106 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 IL36AQ9UHA7 158 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 RIMS3Q9UJD0 308 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 FBXO10Q9UK96 956 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 MRPS23Q9Y3D9 190 aaKnown RBP8.03□□□□□ -1.12
UBR4-202ENST00000375224 ASB1Q9Y576 335 aa8.03□□□□□ -1.12
UBR4-202ENST00000375224 HAT1O14929 419 aa8.02□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms