RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 SKIV2L2P42285 1042 aaKnown RBP20.33■□□□□ 0.85
MAP1LC3A-202ENST00000374837 ZC3HC1Q86WB0 502 aaKnown RBP20.33■□□□□ 0.85
MAP1LC3A-202ENST00000374837 CPNE9Q8IYJ1 553 aa20.33■□□□□ 0.85
MAP1LC3A-202ENST00000374837 LMNTD1Q8N9Z9 388 aa20.33■□□□□ 0.85
MAP1LC3A-202ENST00000374837 PMEPA1Q969W9 287 aa20.33■□□□□ 0.85
MAP1LC3A-202ENST00000374837 RAD51AP1Q96B01 352 aa20.33■□□□□ 0.85
MAP1LC3A-202ENST00000374837 SLC41A2Q96JW4 573 aa20.33■□□□□ 0.85
MAP1LC3A-202ENST00000374837 IL17FQ96PD4 163 aa20.33■□□□□ 0.85
MAP1LC3A-202ENST00000374837 SIDT1Q9NXL6 827 aaKnown RBP20.33■□□□□ 0.85
MAP1LC3A-202ENST00000374837 NSMCE4AQ9NXX6 385 aa20.33■□□□□ 0.85
MAP1LC3A-202ENST00000374837 SPHK1Q9NYA1 384 aa20.33■□□□□ 0.85
MAP1LC3A-202ENST00000374837 ACTR10Q9NZ32 417 aa20.33■□□□□ 0.85
MAP1LC3A-202ENST00000374837 MTRF1LQ9UGC7 380 aaKnown RBP20.33■□□□□ 0.85
MAP1LC3A-202ENST00000374837 CORO1CQ9ULV4 474 aaPredicted RBP20.33■□□□□ 0.85
MAP1LC3A-202ENST00000374837 KIF26BQ2KJY2 2108 aa20.32■□□□□ 0.84
MAP1LC3A-202ENST00000374837 WDFY3Q8IZQ1 3526 aa20.32■□□□□ 0.84
MAP1LC3A-202ENST00000374837 PIPSLA2A3N6 862 aa20.32■□□□□ 0.84
MAP1LC3A-202ENST00000374837 FAM159BA6NKW6 160 aa20.32■□□□□ 0.84
MAP1LC3A-202ENST00000374837 C2orf74A8MZ97 194 aa20.32■□□□□ 0.84
MAP1LC3A-202ENST00000374837 ZNF500O60304 480 aaPredicted RBP20.32■□□□□ 0.84
MAP1LC3A-202ENST00000374837 PRAMEF10O60809 474 aa20.32■□□□□ 0.84
MAP1LC3A-202ENST00000374837 PSIP1O75475 530 aaKnown RBP20.32■□□□□ 0.84
MAP1LC3A-202ENST00000374837 CBSLP0DN79 551 aa20.32■□□□□ 0.84
MAP1LC3A-202ENST00000374837 ENO3P13929 434 aaPredicted RBP20.32■□□□□ 0.84
MAP1LC3A-202ENST00000374837 NELFEP18615 380 aaKnown RBP20.32■□□□□ 0.84
MAP1LC3A-202ENST00000374837 ECHS1P30084 290 aa20.32■□□□□ 0.84
MAP1LC3A-202ENST00000374837 CBSP35520 551 aa20.32■□□□□ 0.84
MAP1LC3A-202ENST00000374837 CCNFP41002 786 aa20.32■□□□□ 0.84
MAP1LC3A-202ENST00000374837 RAB28P51157 221 aa20.32■□□□□ 0.84
MAP1LC3A-202ENST00000374837 PGGT1BP53609 377 aa20.32■□□□□ 0.84
MAP1LC3A-202ENST00000374837 SH3BP2P78314 561 aa20.32■□□□□ 0.84
MAP1LC3A-202ENST00000374837 PAQR3Q6TCH7 311 aa20.32■□□□□ 0.84
MAP1LC3A-202ENST00000374837 CDKL2Q92772 493 aa20.32■□□□□ 0.84
MAP1LC3A-202ENST00000374837 OLFM1Q99784 485 aa20.32■□□□□ 0.84
MAP1LC3A-202ENST00000374837 MCMBPQ9BTE3 642 aa20.32■□□□□ 0.84
MAP1LC3A-202ENST00000374837 B3GNT4Q9C0J1 378 aa20.32■□□□□ 0.84
MAP1LC3A-202ENST00000374837 TWSG1Q9GZX9 223 aa20.32■□□□□ 0.84
MAP1LC3A-202ENST00000374837 FBXO8Q9NRD0 319 aa20.32■□□□□ 0.84
MAP1LC3A-202ENST00000374837 FOXJ2Q9P0K8 574 aa20.32■□□□□ 0.84
MAP1LC3A-202ENST00000374837 PCDHGA3Q9Y5H0 932 aa20.32■□□□□ 0.84
MAP1LC3A-202ENST00000374837 KRT87PA6NCN2 255 aa20.31■□□□□ 0.84
MAP1LC3A-202ENST00000374837 ARHGEF33A8MVX0 844 aa20.31■□□□□ 0.84
MAP1LC3A-202ENST00000374837 RASGRF2O14827 1237 aa20.31■□□□□ 0.84
MAP1LC3A-202ENST00000374837 CDH3P22223 829 aa20.31■□□□□ 0.84
MAP1LC3A-202ENST00000374837 FDXRP22570 491 aa20.31■□□□□ 0.84
MAP1LC3A-202ENST00000374837 PCBP4P57723 403 aaKnown RBP20.31■□□□□ 0.84
MAP1LC3A-202ENST00000374837 TMEM164Q5U3C3 297 aa20.31■□□□□ 0.84
MAP1LC3A-202ENST00000374837 ANKS6Q68DC2 871 aa20.31■□□□□ 0.84
MAP1LC3A-202ENST00000374837 FAM45BPQ6NSW5 357 aa20.31■□□□□ 0.84
MAP1LC3A-202ENST00000374837 PIWIL4Q7Z3Z4 852 aaKnown RBP20.31■□□□□ 0.84
MAP1LC3A-202ENST00000374837 KMT5CQ86Y97 462 aa20.31■□□□□ 0.84
MAP1LC3A-202ENST00000374837 CARFQ8N187 725 aa20.31■□□□□ 0.84
MAP1LC3A-202ENST00000374837 C2orf73Q8N5S3 287 aaPredicted RBP20.31■□□□□ 0.84
MAP1LC3A-202ENST00000374837 LINC01555Q8NAE3 123 aa20.31■□□□□ 0.84
MAP1LC3A-202ENST00000374837 FAM45AQ8TCE6 357 aa20.31■□□□□ 0.84
MAP1LC3A-202ENST00000374837 MAGEC3Q8TD91 643 aa20.31■□□□□ 0.84
MAP1LC3A-202ENST00000374837 EEF1AKMT1Q8WVE0 214 aa20.31■□□□□ 0.84
MAP1LC3A-202ENST00000374837 ASB11Q8WXH4 323 aa20.31■□□□□ 0.84
MAP1LC3A-202ENST00000374837 ELMO2Q96JJ3 720 aa20.31■□□□□ 0.84
MAP1LC3A-202ENST00000374837 OR2A14Q96R47 310 aa20.31■□□□□ 0.84
MAP1LC3A-202ENST00000374837 CTRCQ99895 268 aa20.31■□□□□ 0.84
MAP1LC3A-202ENST00000374837 APMAPQ9HDC9 416 aa20.31■□□□□ 0.84
MAP1LC3A-202ENST00000374837 C1GALT1Q9NS00 363 aa20.31■□□□□ 0.84
MAP1LC3A-202ENST00000374837 SLC39A10Q9ULF5 831 aa20.31■□□□□ 0.84
MAP1LC3A-202ENST00000374837 B3GALT1Q9Y5Z6 326 aa20.31■□□□□ 0.84
MAP1LC3A-202ENST00000374837 SLC9B1P1A6NJY1 282 aa20.3■□□□□ 0.84
MAP1LC3A-202ENST00000374837 EIF3FO00303 357 aaPredicted RBP20.3■□□□□ 0.84
MAP1LC3A-202ENST00000374837 RHOXF2BP0C7M4 288 aa20.3■□□□□ 0.84
MAP1LC3A-202ENST00000374837 UGT2B7P16662 529 aa20.3■□□□□ 0.84
MAP1LC3A-202ENST00000374837 PEBP1P30086 187 aaKnown RBP20.3■□□□□ 0.84
MAP1LC3A-202ENST00000374837 EIF2S3P41091 472 aaKnown RBP20.3■□□□□ 0.84
MAP1LC3A-202ENST00000374837 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.3■□□□□ 0.84
MAP1LC3A-202ENST00000374837 DCAF12Q5T6F0 453 aa20.3■□□□□ 0.84
MAP1LC3A-202ENST00000374837 CEP128Q6ZU80 1094 aa20.3■□□□□ 0.84
MAP1LC3A-202ENST00000374837 RELL1Q8IUW5 271 aa20.3■□□□□ 0.84
MAP1LC3A-202ENST00000374837 RASGRP3Q8IV61 690 aa20.3■□□□□ 0.84
MAP1LC3A-202ENST00000374837 OR2L8Q8NGY9 312 aa20.3■□□□□ 0.84
MAP1LC3A-202ENST00000374837 FLVCR1-AS1Q8TAF5 88 aa20.3■□□□□ 0.84
MAP1LC3A-202ENST00000374837 FBF1Q8TES7 1133 aa20.3■□□□□ 0.84
MAP1LC3A-202ENST00000374837 RHOXF2Q9BQY4 288 aa20.3■□□□□ 0.84
MAP1LC3A-202ENST00000374837 DDA1Q9BW61 102 aa20.3■□□□□ 0.84
MAP1LC3A-202ENST00000374837 RHOJQ9H4E5 214 aa20.3■□□□□ 0.84
MAP1LC3A-202ENST00000374837 GCN1Q92616 2671 aaKnown RBP20.29■□□□□ 0.84
MAP1LC3A-202ENST00000374837 FAM95CA0A1B0GW59 222 aa20.29■□□□□ 0.84
MAP1LC3A-202ENST00000374837 ISM1B1AKI9 464 aa20.29■□□□□ 0.84
MAP1LC3A-202ENST00000374837 GFYI3L273 518 aa20.29■□□□□ 0.84
MAP1LC3A-202ENST00000374837 SPAG6O75602 509 aa20.29■□□□□ 0.84
MAP1LC3A-202ENST00000374837 ZBTB11O95625 1053 aaPredicted RBP20.29■□□□□ 0.84
MAP1LC3A-202ENST00000374837 CATP04040 527 aaKnown RBP20.29■□□□□ 0.84
MAP1LC3A-202ENST00000374837 FOLR1P15328 257 aa20.29■□□□□ 0.84
MAP1LC3A-202ENST00000374837 SAT1P21673 171 aa20.29■□□□□ 0.84
MAP1LC3A-202ENST00000374837 STX2P32856 288 aa20.29■□□□□ 0.84
MAP1LC3A-202ENST00000374837 ARL4DP49703 201 aa20.29■□□□□ 0.84
MAP1LC3A-202ENST00000374837 RGS4P49798 205 aa20.29■□□□□ 0.84
MAP1LC3A-202ENST00000374837 RAB15P59190 212 aa20.29■□□□□ 0.84
MAP1LC3A-202ENST00000374837 HSD11B2P80365 405 aa20.29■□□□□ 0.84
MAP1LC3A-202ENST00000374837 FOXM1Q08050 763 aa20.29■□□□□ 0.84
MAP1LC3A-202ENST00000374837 PDAP1Q13442 181 aaKnown RBP20.29■□□□□ 0.84
MAP1LC3A-202ENST00000374837 KCNAB1Q14722 419 aa20.29■□□□□ 0.84
MAP1LC3A-202ENST00000374837 KIR2DS3Q14952 304 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms