RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 TGM5O43548 720 aa16.66■□□□□ 0.26
RXRB-201ENST00000374680 CLDN9O95484 217 aa16.66■□□□□ 0.26
RXRB-201ENST00000374680 CDH1P12830 882 aa16.66■□□□□ 0.26
RXRB-201ENST00000374680 CDK9P50750 372 aaKnown RBP16.66■□□□□ 0.26
RXRB-201ENST00000374680 GRIK2Q13002 908 aa16.66■□□□□ 0.26
RXRB-201ENST00000374680 RAB39AQ14964 217 aa16.66■□□□□ 0.26
RXRB-201ENST00000374680 ADRM1Q16186 407 aa16.66■□□□□ 0.26
RXRB-201ENST00000374680 CDKN3Q16667 212 aa16.66■□□□□ 0.26
RXRB-201ENST00000374680 OR4F3Q6IEY1 312 aa16.66■□□□□ 0.26
RXRB-201ENST00000374680 XKR5Q6UX68 686 aa16.66■□□□□ 0.26
RXRB-201ENST00000374680 OTOP2Q7RTS6 562 aa16.66■□□□□ 0.26
RXRB-201ENST00000374680 TMEM179BQ7Z7N9 219 aa16.66■□□□□ 0.26
RXRB-201ENST00000374680 ZDHHC13Q8IUH4 622 aa16.66■□□□□ 0.26
RXRB-201ENST00000374680 FAM120BQ96EK7 910 aaKnown RBP16.66■□□□□ 0.26
RXRB-201ENST00000374680 PDLIM5Q96HC4 596 aaKnown RBP16.66■□□□□ 0.26
RXRB-201ENST00000374680 SLC46A2Q9BY10 475 aa16.66■□□□□ 0.26
RXRB-201ENST00000374680 SUV39H2Q9H5I1 410 aa16.66■□□□□ 0.26
RXRB-201ENST00000374680 ETAA1Q9NY74 926 aa16.66■□□□□ 0.26
RXRB-201ENST00000374680 ELOVL7A1L3X0 281 aa16.65■□□□□ 0.26
RXRB-201ENST00000374680 CXCR6O00574 342 aa16.65■□□□□ 0.26
RXRB-201ENST00000374680 CPSF4O95639 269 aaKnown RBP16.65■□□□□ 0.26
RXRB-201ENST00000374680 SERPINA1P01009 418 aa16.65■□□□□ 0.26
RXRB-201ENST00000374680 EPORP19235 508 aa16.65■□□□□ 0.26
RXRB-201ENST00000374680 GGT1P19440 569 aa16.65■□□□□ 0.26
RXRB-201ENST00000374680 PIGAP37287 484 aa16.65■□□□□ 0.26
RXRB-201ENST00000374680 ENTPD1P49961 510 aa16.65■□□□□ 0.26
RXRB-201ENST00000374680 KIAA0040Q15053 153 aa16.65■□□□□ 0.26
RXRB-201ENST00000374680 FGD3Q5JSP0 725 aa16.65■□□□□ 0.26
RXRB-201ENST00000374680 TPGS2Q68CL5 300 aa16.65■□□□□ 0.26
RXRB-201ENST00000374680 NEK5Q6P3R8 708 aa16.65■□□□□ 0.26
RXRB-201ENST00000374680 Q6ZVL8 140 aa16.65■□□□□ 0.26
RXRB-201ENST00000374680 TCEAL4Q96EI5 215 aa16.65■□□□□ 0.26
RXRB-201ENST00000374680 SLC47A1Q96FL8 570 aa16.65■□□□□ 0.26
RXRB-201ENST00000374680 P2RY13Q9BPV8 354 aa16.65■□□□□ 0.26
RXRB-201ENST00000374680 BRD9Q9H8M2 597 aa16.65■□□□□ 0.26
RXRB-201ENST00000374680 KIAA1522Q9P206 1035 aaPredicted RBP16.65■□□□□ 0.26
RXRB-201ENST00000374680 TMEM202A6NGA9 273 aa16.65■□□□□ 0.26
RXRB-201ENST00000374680 MYO1GB0I1T2 1018 aa16.65■□□□□ 0.26
RXRB-201ENST00000374680 H0Y858 1186 aa16.65■□□□□ 0.26
RXRB-201ENST00000374680 ZBTB11O95625 1053 aaPredicted RBP16.65■□□□□ 0.26
RXRB-201ENST00000374680 TFPTP0C1Z6 253 aa16.65■□□□□ 0.26
RXRB-201ENST00000374680 CD247P20963 164 aa16.65■□□□□ 0.26
RXRB-201ENST00000374680 RPS6KA3P51812 740 aa16.65■□□□□ 0.26
RXRB-201ENST00000374680 SLC14A1Q13336 389 aa16.65■□□□□ 0.26
RXRB-201ENST00000374680 GRAMD4Q6IC98 578 aa16.65■□□□□ 0.26
RXRB-201ENST00000374680 PATL1Q86TB9 770 aaKnown RBP16.65■□□□□ 0.26
RXRB-201ENST00000374680 RIMKLAQ8IXN7 391 aa16.65■□□□□ 0.26
RXRB-201ENST00000374680 SLC39A11Q8N1S5 342 aa16.65■□□□□ 0.26
RXRB-201ENST00000374680 DPP10Q8N608 796 aa16.65■□□□□ 0.26
RXRB-201ENST00000374680 HM13Q8TCT9 377 aa16.65■□□□□ 0.26
RXRB-201ENST00000374680 BPIFB1Q8TDL5 484 aa16.65■□□□□ 0.26
RXRB-201ENST00000374680 DGCR6LQ9BY27 220 aa16.65■□□□□ 0.26
RXRB-201ENST00000374680 FANCEQ9HB96 536 aa16.65■□□□□ 0.26
RXRB-201ENST00000374680 C1orf109Q9NX04 203 aa16.65■□□□□ 0.26
RXRB-201ENST00000374680 LEFTY2O00292 366 aa16.64■□□□□ 0.25
RXRB-201ENST00000374680 PRAMEF4O60810 478 aa16.64■□□□□ 0.25
RXRB-201ENST00000374680 LRG1P02750 347 aa16.64■□□□□ 0.25
RXRB-201ENST00000374680 HIST1H2AGP0C0S8 130 aaPredicted RBP16.64■□□□□ 0.25
RXRB-201ENST00000374680 RAP2AP10114 183 aa16.64■□□□□ 0.25
RXRB-201ENST00000374680 HIST1H2ADP20671 130 aa16.64■□□□□ 0.25
RXRB-201ENST00000374680 AGXTP21549 392 aa16.64■□□□□ 0.25
RXRB-201ENST00000374680 S100A3P33764 101 aa16.64■□□□□ 0.25
RXRB-201ENST00000374680 RAB33AQ14088 237 aa16.64■□□□□ 0.25
RXRB-201ENST00000374680 TTLL9Q3SXZ7 439 aa16.64■□□□□ 0.25
RXRB-201ENST00000374680 PRAMEF9Q5VWM5 478 aa16.64■□□□□ 0.25
RXRB-201ENST00000374680 Q6ZNB5 142 aa16.64■□□□□ 0.25
RXRB-201ENST00000374680 PACRGLQ8N7B6 248 aa16.64■□□□□ 0.25
RXRB-201ENST00000374680 SNRNP27Q8WVK2 155 aaKnown RBP16.64■□□□□ 0.25
RXRB-201ENST00000374680 EZH1Q92800 747 aaPredicted RBP16.64■□□□□ 0.25
RXRB-201ENST00000374680 MED8Q96G25 268 aa16.64■□□□□ 0.25
RXRB-201ENST00000374680 HIST1H2AHQ96KK5 128 aa16.64■□□□□ 0.25
RXRB-201ENST00000374680 HIST1H2AJQ99878 128 aa16.64■□□□□ 0.25
RXRB-201ENST00000374680 H2AFJQ9BTM1 129 aa16.64■□□□□ 0.25
RXRB-201ENST00000374680 DNMT3BQ9UBC3 853 aaKnown RBP16.64■□□□□ 0.25
RXRB-201ENST00000374680 PADI4Q9UM07 663 aa16.64■□□□□ 0.25
RXRB-201ENST00000374680 MYO9BQ13459 2157 aa16.64■□□□□ 0.25
RXRB-201ENST00000374680 PABPN1LA6NDY0 278 aaKnown RBP16.64■□□□□ 0.25
RXRB-201ENST00000374680 MITFO75030 526 aaPredicted RBP16.64■□□□□ 0.25
RXRB-201ENST00000374680 RFPL2O75678 378 aa16.64■□□□□ 0.25
RXRB-201ENST00000374680 THRBP10828 461 aa16.64■□□□□ 0.25
RXRB-201ENST00000374680 UMPSP11172 480 aa16.64■□□□□ 0.25
RXRB-201ENST00000374680 JAK1P23458 1154 aa16.64■□□□□ 0.25
RXRB-201ENST00000374680 NSG1P42857 185 aa16.64■□□□□ 0.25
RXRB-201ENST00000374680 GSSP48637 474 aa16.64■□□□□ 0.25
RXRB-201ENST00000374680 RPS14P62263 151 aaKnown RBP16.64■□□□□ 0.25
RXRB-201ENST00000374680 DAG1Q14118 895 aa16.64■□□□□ 0.25
RXRB-201ENST00000374680 CBX2Q14781 532 aaPredicted RBP16.64■□□□□ 0.25
RXRB-201ENST00000374680 C16orf72Q14CZ0 275 aa16.64■□□□□ 0.25
RXRB-201ENST00000374680 ZNF697Q5TEC3 545 aa16.64■□□□□ 0.25
RXRB-201ENST00000374680 DOK6Q6PKX4 331 aa16.64■□□□□ 0.25
RXRB-201ENST00000374680 OR7A2PQ8NGA2 310 aa16.64■□□□□ 0.25
RXRB-201ENST00000374680 SDCCAG3Q96C92 435 aa16.64■□□□□ 0.25
RXRB-201ENST00000374680 BARD1Q99728 777 aaKnown RBP16.64■□□□□ 0.25
RXRB-201ENST00000374680 DPH2Q9BQC3 489 aaPredicted RBP16.64■□□□□ 0.25
RXRB-201ENST00000374680 HTATIP2Q9BUP3 242 aa16.64■□□□□ 0.25
RXRB-201ENST00000374680 TMPRSS11EQ9UL52 423 aa16.64■□□□□ 0.25
RXRB-201ENST00000374680 FAF1Q9UNN5 650 aaPredicted RBP16.64■□□□□ 0.25
RXRB-201ENST00000374680 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.63■□□□□ 0.25
RXRB-201ENST00000374680 PSMA3P25788 255 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 AQP1P29972 269 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms