RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 ACSS3Q9H6R3 686 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 POLR3BQ9NW08 1133 aaPredicted RBP14.07□□□□□ -0.16
TRAF1-201ENST00000373887 IL36AQ9UHA7 158 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 MAU2Q9Y6X3 613 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 PKMP14618 531 aaKnown RBP14.07□□□□□ -0.16
TRAF1-201ENST00000373887 HSPA7P48741 367 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 DCDC1P59894 354 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 MCCD1P59942 119 aaPredicted RBP14.07□□□□□ -0.16
TRAF1-201ENST00000373887 TBC1D25Q3MII6 688 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 C11orf65Q8NCR3 313 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 FZD10Q9ULW2 581 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 PCDHGA10Q9Y5H3 936 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 L7N2F9 121 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 NME6O75414 186 aaPredicted RBP14.06□□□□□ -0.16
TRAF1-201ENST00000373887 NMBRP28336 390 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 VAMP2P63027 116 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 ECT2LQ008S8 904 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 NFATC2Q13469 925 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 DUPD1Q68J44 220 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 RAB11FIP2Q7L804 512 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 BRSK1Q8TDC3 778 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 BADQ92934 168 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 PIWIL1Q96J94 861 aaKnown RBP14.06□□□□□ -0.16
TRAF1-201ENST00000373887 CTPS2Q9NRF8 586 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 PDPK1O15530 556 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 MAPK12P53778 367 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 PRKCDQ05655 676 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 YTHDF3Q7Z739 585 aaKnown RBP14.06□□□□□ -0.16
TRAF1-201ENST00000373887 TRMUO75648 421 aaKnown RBP14.06□□□□□ -0.16
TRAF1-201ENST00000373887 VNN1O95497 513 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 SLC11A1P49279 550 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 NDUFA9Q16795 377 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 SYPL2Q5VXT5 272 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 LRRC69Q6ZNQ3 347 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 UNC5BQ8IZJ1 945 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 MINDY2Q8NBR6 621 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 AZIN2Q96A70 460 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 EBF3Q9H4W6 596 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 PLCL2Q9UPR0 1127 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 CFAP20Q9Y6A4 193 aaKnown RBP14.06□□□□□ -0.16
TRAF1-201ENST00000373887 FABP12A6NFH5 140 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 C5orf60A6NFR6 353 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 GSC2O15499 205 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 MTX2O75431 263 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 CLDN9O95484 217 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 ALPIP09923 528 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 ALPPL2P10696 532 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 TSHRP16473 764 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 CMPK1P30085 196 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 ADNP2Q6IQ32 1131 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 OR4C6Q8NH72 309 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 IFT27Q9BW83 186 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 MCCC2Q9HCC0 563 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 ZNF446Q9NWS9 450 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 SMPD3Q9NY59 655 aaPredicted RBP14.06□□□□□ -0.16
TRAF1-201ENST00000373887 FAM237AA0A1B0GTK4 181 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 FOXO6A8MYZ6 492 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 M0R036 132 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 LINGO3P0C6S8 592 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 GJA8P48165 433 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 ZDHHC20Q5W0Z9 365 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 CBR4Q8N4T8 237 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 SLC38A4Q969I6 547 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 MFSD3Q96ES6 412 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 PARPBPQ9NWS1 579 aa14.06□□□□□ -0.16
TRAF1-201ENST00000373887 H3BSH0 61 aa14.05□□□□□ -0.16
TRAF1-201ENST00000373887 SAP18O00422 153 aaKnown RBP14.05□□□□□ -0.16
TRAF1-201ENST00000373887 CLPXO76031 633 aa14.05□□□□□ -0.16
TRAF1-201ENST00000373887 IPO13O94829 963 aaKnown RBP14.05□□□□□ -0.16
TRAF1-201ENST00000373887 SRCP12931 536 aa14.05□□□□□ -0.16
TRAF1-201ENST00000373887 GTF2H2Q13888 395 aa14.05□□□□□ -0.16
TRAF1-201ENST00000373887 PHF19Q5T6S3 580 aa14.05□□□□□ -0.16
TRAF1-201ENST00000373887 GTF2H2CQ6P1K8 395 aa14.05□□□□□ -0.16
TRAF1-201ENST00000373887 TTC29Q8NA56 475 aaPredicted RBP14.05□□□□□ -0.16
TRAF1-201ENST00000373887 SRFBP1Q8NEF9 429 aaKnown RBP14.05□□□□□ -0.16
TRAF1-201ENST00000373887 SETD7Q8WTS6 366 aaKnown RBP14.05□□□□□ -0.16
TRAF1-201ENST00000373887 ESAMQ96AP7 390 aa14.05□□□□□ -0.16
TRAF1-201ENST00000373887 IPPKQ9H8X2 491 aa14.05□□□□□ -0.16
TRAF1-201ENST00000373887 TVP23BQ9NYZ1 205 aa14.05□□□□□ -0.16
TRAF1-201ENST00000373887 ZNF69Q9UC07 566 aa14.05□□□□□ -0.16
TRAF1-201ENST00000373887 FBXW11Q9UKB1 542 aa14.05□□□□□ -0.16
TRAF1-201ENST00000373887 AKAP8O43823 692 aaKnown RBP14.05□□□□□ -0.16
TRAF1-201ENST00000373887 EDF1O60869 148 aaKnown RBP14.05□□□□□ -0.16
TRAF1-201ENST00000373887 CCNCP24863 283 aa14.05□□□□□ -0.16
TRAF1-201ENST00000373887 RPS9P46781 194 aaKnown RBP14.05□□□□□ -0.16
TRAF1-201ENST00000373887 CLEC20AQ6ZU45 233 aa14.05□□□□□ -0.16
TRAF1-201ENST00000373887 Q8N9G6 341 aaPredicted RBP14.05□□□□□ -0.16
TRAF1-201ENST00000373887 UFD1Q92890 307 aa14.05□□□□□ -0.16
TRAF1-201ENST00000373887 NMUR2Q9GZQ4 415 aa14.05□□□□□ -0.16
TRAF1-201ENST00000373887 FZD8Q9H461 694 aa14.05□□□□□ -0.16
TRAF1-201ENST00000373887 EHD1Q9H4M9 534 aa14.05□□□□□ -0.16
TRAF1-201ENST00000373887 ABCC6O95255 1503 aa14.05□□□□□ -0.16
TRAF1-201ENST00000373887 PGLSO95336 258 aa14.05□□□□□ -0.16
TRAF1-201ENST00000373887 CSF2RAP15509 400 aa14.05□□□□□ -0.16
TRAF1-201ENST00000373887 LHCGRP22888 699 aa14.05□□□□□ -0.16
TRAF1-201ENST00000373887 RFTN2Q52LD8 501 aaPredicted RBP14.05□□□□□ -0.16
TRAF1-201ENST00000373887 ZSWIM3Q96MP5 696 aa14.05□□□□□ -0.16
TRAF1-201ENST00000373887 CARS2Q9HA77 564 aaKnown RBP14.05□□□□□ -0.16
TRAF1-201ENST00000373887 TUBA8Q9NY65 449 aaPredicted RBP14.05□□□□□ -0.16
TRAF1-201ENST00000373887 MAN2B2Q9Y2E5 1009 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms