RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 MAPKAPK3Q16644 382 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 HIST2H2ACQ16777 129 aaPredicted RBP8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 PLA2G4EQ3MJ16 856 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 SYTL3Q4VX76 610 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 FAM98BQ52LJ0 330 aaKnown RBP8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 SPIN4Q56A73 249 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 LRIF1Q5T3J3 769 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 FRG2Q64ET8 278 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 HIST2H2AA3Q6FI13 130 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 LETMD1Q6P1Q0 360 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 TMEM154Q6P9G4 183 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 LIPIQ6XZB0 460 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 Q6ZVU0 165 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 ZSWIM9Q86XI8 627 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 TMEM132CQ8N3T6 1108 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 RAB42Q8N4Z0 105 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 CLDN19Q8N6F1 224 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 BEND7Q8N7W2 519 aaPredicted RBP8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 TMEM102Q8N9M5 508 aaPredicted RBP8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 SLC13A3Q8WWT9 602 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 SMG7Q92540 1137 aaKnown RBP8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 TMEM125Q96AQ2 219 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 VPS33AQ96AX1 596 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 TBC1D20Q96BZ9 403 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 AP2M1Q96CW1 435 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 MTERF3Q96E29 417 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 WDR34Q96EX3 536 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 DTD2Q96FN9 168 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 ITCHQ96J02 903 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 FCRL1Q96LA6 429 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 FRG2BQ96QU4 278 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 KCTD14Q9BQ13 255 aaPredicted RBP8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 EFCAB11Q9BUY7 163 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 PCBD2Q9H0N5 130 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 CLMPQ9H6B4 373 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 TRIM39Q9HCM9 518 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 PCDH12Q9NPG4 1184 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 OLAHQ9NV23 265 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 WDR70Q9NW82 654 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 TUBA8Q9NY65 449 aaPredicted RBP8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 SLCO3A1Q9UIG8 710 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 CLEC4EQ9ULY5 219 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 G3BP2Q9UN86 482 aaKnown RBP8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 PDE10AQ9Y233 779 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 RUVBL1Q9Y265 456 aaKnown RBP8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 TIMM22Q9Y584 194 aa8.51□□□□□ -1.05
SNRNP40-202ENST00000373720 SLC5A10A0PJK1 596 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 FXYD1O00168 92 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 NME4O00746 187 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 AREL1O15033 823 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 PI15O43692 258 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 RNASEH1O60930 286 aaKnown RBP8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 SEC22BO75396 215 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 DEAF1O75398 565 aaPredicted RBP8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 RECQL5O94762 991 aaPredicted RBP8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 HPRP00739 348 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 MYCP01106 439 aaPredicted RBP8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 CYP17A1P05093 508 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 PGRP06401 933 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 CDH1P12830 882 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 SLC2A4P14672 509 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 TTKP33981 857 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 DPP6P42658 865 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 CTSOP43234 321 aaPredicted RBP8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 MAGEA8P43361 318 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 HSPA7P48741 367 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 STK19P49842 368 aaPredicted RBP8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 AGTR2P50052 363 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 PGGT1BP53609 377 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 DIO3P55073 304 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 RPS14P62263 151 aaKnown RBP8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 TUBA4AP68366 448 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 B4GALNT1Q00973 533 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 LIPEQ05469 1076 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 HSPA14Q0VDF9 509 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 TMEM115Q12893 351 aaPredicted RBP8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 DUSP6Q16828 381 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 C6orf10Q5SRN2 563 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 ANXA8L1Q5VT79 327 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 GRHL2Q6ISB3 625 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 NANOGP8Q6NSW7 305 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 ERN2Q76MJ5 926 aaKnown RBP8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 R3HCC1LQ7Z5L2 792 aaKnown RBP8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 GRASPQ7Z6J2 395 aaPredicted RBP8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 TSPAN33Q86UF1 283 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 RETREG3Q86VR2 466 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 SFRP1Q8N474 314 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 OR52B6Q8NGF0 335 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 ZFP28Q8NHY6 868 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 PNPT1Q8TCS8 783 aaKnown RBP8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 HM13Q8TCT9 377 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 SELENOMQ8WWX9 145 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 ELMO1Q92556 727 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 PPWD1Q96BP3 646 aaKnown RBP8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 ZNF707Q96C28 371 aaPredicted RBP8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 MOCOSQ96EN8 888 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 COQ10AQ96MF6 247 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 NSMCE2Q96MF7 247 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 ASB16Q96NS5 453 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 GBP5Q96PP8 586 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms