RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 SH3BP2P78314 561 aa11.64□□□□□ -0.55
HDAC8-201ENST00000373554 SLC7A5Q01650 507 aa11.64□□□□□ -0.55
HDAC8-201ENST00000373554 ACY1Q03154 408 aa11.64□□□□□ -0.55
HDAC8-201ENST00000373554 MGAT5Q09328 741 aa11.64□□□□□ -0.55
HDAC8-201ENST00000373554 CUL1Q13616 776 aa11.64□□□□□ -0.55
HDAC8-201ENST00000373554 KYNUQ16719 465 aa11.64□□□□□ -0.55
HDAC8-201ENST00000373554 KLHL38Q2WGJ6 581 aa11.64□□□□□ -0.55
HDAC8-201ENST00000373554 ACSBG2Q5FVE4 666 aa11.64□□□□□ -0.55
HDAC8-201ENST00000373554 TMTC4Q5T4D3 741 aa11.64□□□□□ -0.55
HDAC8-201ENST00000373554 TEDDM1Q5T9Z0 273 aa11.64□□□□□ -0.55
HDAC8-201ENST00000373554 LRRC8EQ6NSJ5 796 aa11.64□□□□□ -0.55
HDAC8-201ENST00000373554 C19orf48Q6RUI8 117 aa11.64□□□□□ -0.55
HDAC8-201ENST00000373554 SPESP1Q6UW49 350 aa11.64□□□□□ -0.55
HDAC8-201ENST00000373554 CAPN12Q6ZSI9 719 aa11.64□□□□□ -0.55
HDAC8-201ENST00000373554 NEK10Q6ZWH5 1172 aa11.64□□□□□ -0.55
HDAC8-201ENST00000373554 PPP1R3BQ86XI6 285 aa11.64□□□□□ -0.55
HDAC8-201ENST00000373554 PALM2Q8IXS6 379 aa11.64□□□□□ -0.55
HDAC8-201ENST00000373554 GIMAP7Q8NHV1 300 aa11.64□□□□□ -0.55
HDAC8-201ENST00000373554 FBXO25Q8TCJ0 367 aa11.64□□□□□ -0.55
HDAC8-201ENST00000373554 CD200R1Q8TD46 325 aa11.64□□□□□ -0.55
HDAC8-201ENST00000373554 INPP5DQ92835 1189 aa11.64□□□□□ -0.55
HDAC8-201ENST00000373554 NDNQ99608 321 aa11.64□□□□□ -0.55
HDAC8-201ENST00000373554 NRTNQ99748 197 aa11.64□□□□□ -0.55
HDAC8-201ENST00000373554 LRRC1Q9BTT6 524 aa11.64□□□□□ -0.55
HDAC8-201ENST00000373554 PITPNM3Q9BZ71 974 aa11.64□□□□□ -0.55
HDAC8-201ENST00000373554 FANCEQ9HB96 536 aa11.64□□□□□ -0.55
HDAC8-201ENST00000373554 APMAPQ9HDC9 416 aa11.64□□□□□ -0.55
HDAC8-201ENST00000373554 PDE7BQ9NP56 450 aa11.64□□□□□ -0.55
HDAC8-201ENST00000373554 FAM114A2Q9NRY5 505 aa11.64□□□□□ -0.55
HDAC8-201ENST00000373554 TAS2R13Q9NYV9 303 aa11.64□□□□□ -0.55
HDAC8-201ENST00000373554 SLC17A6Q9P2U8 582 aa11.64□□□□□ -0.55
HDAC8-201ENST00000373554 GALPQ9UBC7 116 aa11.64□□□□□ -0.55
HDAC8-201ENST00000373554 TRMT6Q9UJA5 497 aaKnown RBP11.64□□□□□ -0.55
HDAC8-201ENST00000373554 SLC39A10Q9ULF5 831 aa11.64□□□□□ -0.55
HDAC8-201ENST00000373554 CORO1CQ9ULV4 474 aaPredicted RBP11.64□□□□□ -0.55
HDAC8-201ENST00000373554 MED16Q9Y2X0 877 aa11.64□□□□□ -0.55
HDAC8-201ENST00000373554 URB1O60287 2271 aaKnown RBP11.63□□□□□ -0.55
HDAC8-201ENST00000373554 ADAMTS20P59510 1910 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 ESYT3A0FGR9 886 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 SLC9B1P1A6NJY1 282 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 ISM1B1AKI9 464 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 EIF3FO00303 357 aaPredicted RBP11.63□□□□□ -0.55
HDAC8-201ENST00000373554 RASGRF2O14827 1237 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 STK17BO94768 372 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 MATN4O95460 622 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 C1orf105O95561 183 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 AHSGP02765 367 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 EBLN1P0CF75 366 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 TPBGLP0DKB5 382 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 CBSLP0DN79 551 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 UGT2B7P16662 529 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 GABRB3P28472 473 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 CBSP35520 551 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 SKIV2L2P42285 1042 aaKnown RBP11.63□□□□□ -0.55
HDAC8-201ENST00000373554 RGS4P49798 205 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 ATP1A2P50993 1020 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 TMPRSS3P57727 454 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 GRB7Q14451 532 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 KCNAB1Q14722 419 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 KIR2DS3Q14952 304 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 COL28A1Q2UY09 1125 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 FBXO38Q6PIJ6 1188 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 BPHLQ86WA6 291 aaPredicted RBP11.63□□□□□ -0.55
HDAC8-201ENST00000373554 CCDC25Q86WR0 208 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 RASGRP3Q8IV61 690 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 D2HGDHQ8N465 521 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 MMGT1Q8N4V1 131 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 GPATCH11Q8N954 259 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 OR2L8Q8NGY9 312 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 CDKL2Q92772 493 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 SLC22A18Q96BI1 424 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 PPM1MQ96MI6 270 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 SLC30A3Q99726 388 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 ULBP3Q9BZM4 244 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 FGF21Q9NSA1 209 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 NSMCE4AQ9NXX6 385 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 MOCS1Q9NZB8 636 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 CIDEBQ9UHD4 219 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 RARRES3Q9UL19 164 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 BTRCQ9Y297 605 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 DHRS7Q9Y394 339 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 ZZEF1O43149 2961 aa11.63□□□□□ -0.55
HDAC8-201ENST00000373554 A0A0J9YY10 115 aa11.62□□□□□ -0.55
HDAC8-201ENST00000373554 RAD1O60671 282 aa11.62□□□□□ -0.55
HDAC8-201ENST00000373554 PSIP1O75475 530 aaKnown RBP11.62□□□□□ -0.55
HDAC8-201ENST00000373554 GSTA2P09210 222 aa11.62□□□□□ -0.55
HDAC8-201ENST00000373554 MPC1LP0DKB6 136 aa11.62□□□□□ -0.55
HDAC8-201ENST00000373554 FGF5P12034 268 aa11.62□□□□□ -0.55
HDAC8-201ENST00000373554 FOLR1P15328 257 aa11.62□□□□□ -0.55
HDAC8-201ENST00000373554 ST6GAL1P15907 406 aa11.62□□□□□ -0.55
HDAC8-201ENST00000373554 MCM3P25205 808 aa11.62□□□□□ -0.55
HDAC8-201ENST00000373554 MAP4P27816 1152 aaKnown RBP11.62□□□□□ -0.55
HDAC8-201ENST00000373554 TUBB4BP68371 445 aa11.62□□□□□ -0.55
HDAC8-201ENST00000373554 GUCY2DQ02846 1103 aa11.62□□□□□ -0.55
HDAC8-201ENST00000373554 ILF2Q12905 390 aaKnown RBP11.62□□□□□ -0.55
HDAC8-201ENST00000373554 PDAP1Q13442 181 aaKnown RBP11.62□□□□□ -0.55
HDAC8-201ENST00000373554 TGIF1Q15583 401 aa11.62□□□□□ -0.55
HDAC8-201ENST00000373554 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.62□□□□□ -0.55
HDAC8-201ENST00000373554 MANEAQ5SRI9 462 aa11.62□□□□□ -0.55
HDAC8-201ENST00000373554 RBM20Q5T481 1227 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms