RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 AMIGO1Q86WK6 493 aa15.84■□□□□ 0.13
TMEM53-203ENST00000372242 MAGEC3Q8TD91 643 aa15.84■□□□□ 0.13
TMEM53-203ENST00000372242 PTERQ96BW5 349 aa15.84■□□□□ 0.13
TMEM53-203ENST00000372242 PKP4Q99569 1192 aa15.84■□□□□ 0.13
TMEM53-203ENST00000372242 NUDT22Q9BRQ3 303 aa15.84■□□□□ 0.13
TMEM53-203ENST00000372242 SLC12A9Q9BXP2 914 aa15.84■□□□□ 0.13
TMEM53-203ENST00000372242 ROPN1BQ9BZX4 212 aaPredicted RBP15.84■□□□□ 0.13
TMEM53-203ENST00000372242 ROPN1Q9HAT0 212 aaPredicted RBP15.84■□□□□ 0.13
TMEM53-203ENST00000372242 PARVBQ9HBI1 364 aa15.84■□□□□ 0.13
TMEM53-203ENST00000372242 PCMTD2Q9NV79 361 aa15.84■□□□□ 0.13
TMEM53-203ENST00000372242 ZNF358Q9NW07 568 aa15.84■□□□□ 0.13
TMEM53-203ENST00000372242 ARGLU1Q9NWB6 273 aaPredicted RBP15.84■□□□□ 0.13
TMEM53-203ENST00000372242 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.84■□□□□ 0.13
TMEM53-203ENST00000372242 APOBEC2Q9Y235 224 aaKnown RBP15.84■□□□□ 0.13
TMEM53-203ENST00000372242 DKK1O94907 266 aa15.84■□□□□ 0.13
TMEM53-203ENST00000372242 MT-ND3P03897 115 aa15.84■□□□□ 0.13
TMEM53-203ENST00000372242 GLRBP48167 497 aa15.84■□□□□ 0.13
TMEM53-203ENST00000372242 PPP1CAP62136 330 aa15.84■□□□□ 0.13
TMEM53-203ENST00000372242 GPLD1P80108 840 aa15.84■□□□□ 0.13
TMEM53-203ENST00000372242 SP140Q13342 867 aa15.84■□□□□ 0.13
TMEM53-203ENST00000372242 KRT71Q3SY84 523 aa15.84■□□□□ 0.13
TMEM53-203ENST00000372242 OR9A1PQ8NGU1 263 aa15.84■□□□□ 0.13
TMEM53-203ENST00000372242 MCOLN3Q8TDD5 553 aa15.84■□□□□ 0.13
TMEM53-203ENST00000372242 GFM1Q96RP9 751 aaKnown RBP15.84■□□□□ 0.13
TMEM53-203ENST00000372242 TMEM109Q9BVC6 243 aa15.84■□□□□ 0.13
TMEM53-203ENST00000372242 UNC13CQ8NB66 2214 aa15.84■□□□□ 0.13
TMEM53-203ENST00000372242 ANKRD12Q6UB98 2062 aa15.83■□□□□ 0.12
TMEM53-203ENST00000372242 MYO1CO00159 1063 aa15.83■□□□□ 0.12
TMEM53-203ENST00000372242 BTN3A3O00478 584 aa15.83■□□□□ 0.12
TMEM53-203ENST00000372242 NTN3O00634 580 aaPredicted RBP15.83■□□□□ 0.12
TMEM53-203ENST00000372242 SLC16A5O15375 505 aa15.83■□□□□ 0.12
TMEM53-203ENST00000372242 ZW10O43264 779 aa15.83■□□□□ 0.12
TMEM53-203ENST00000372242 DUX1O43812 170 aa15.83■□□□□ 0.12
TMEM53-203ENST00000372242 SLC16A8O95907 504 aa15.83■□□□□ 0.12
TMEM53-203ENST00000372242 MPOP05164 745 aa15.83■□□□□ 0.12
TMEM53-203ENST00000372242 HOXB3P14651 431 aaPredicted RBP15.83■□□□□ 0.12
TMEM53-203ENST00000372242 POLR2CP19387 275 aaPredicted RBP15.83■□□□□ 0.12
TMEM53-203ENST00000372242 TFEBP19484 476 aa15.83■□□□□ 0.12
TMEM53-203ENST00000372242 CYP2A7P20853 494 aa15.83■□□□□ 0.12
TMEM53-203ENST00000372242 MPSTP25325 297 aa15.83■□□□□ 0.12
TMEM53-203ENST00000372242 SLC26A3P40879 764 aa15.83■□□□□ 0.12
TMEM53-203ENST00000372242 E2F1Q01094 437 aa15.83■□□□□ 0.12
TMEM53-203ENST00000372242 INSM1Q01101 510 aaPredicted RBP15.83■□□□□ 0.12
TMEM53-203ENST00000372242 CASP8Q14790 479 aa15.83■□□□□ 0.12
TMEM53-203ENST00000372242 OR4D1Q15615 310 aa15.83■□□□□ 0.12
TMEM53-203ENST00000372242 PPP1R3AQ16821 1122 aa15.83■□□□□ 0.12
TMEM53-203ENST00000372242 CEP85LQ5SZL2 805 aa15.83■□□□□ 0.12
TMEM53-203ENST00000372242 LINC01555Q8NAE3 123 aa15.83■□□□□ 0.12
TMEM53-203ENST00000372242 FBXO15Q8NCQ5 510 aaPredicted RBP15.83■□□□□ 0.12
TMEM53-203ENST00000372242 DENND1AQ8TEH3 1009 aa15.83■□□□□ 0.12
TMEM53-203ENST00000372242 ALG9Q9H6U8 611 aa15.83■□□□□ 0.12
TMEM53-203ENST00000372242 HRASLS2Q9NWW9 162 aa15.83■□□□□ 0.12
TMEM53-203ENST00000372242 TMEM9Q9P0T7 183 aa15.83■□□□□ 0.12
TMEM53-203ENST00000372242 OR5K3A6NET4 321 aa15.82■□□□□ 0.12
TMEM53-203ENST00000372242 KLHL2O95198 593 aa15.82■□□□□ 0.12
TMEM53-203ENST00000372242 CPNE6O95741 557 aa15.82■□□□□ 0.12
TMEM53-203ENST00000372242 GUCA1CO95843 209 aa15.82■□□□□ 0.12
TMEM53-203ENST00000372242 PYGBP11216 843 aa15.82■□□□□ 0.12
TMEM53-203ENST00000372242 PKLRP30613 574 aa15.82■□□□□ 0.12
TMEM53-203ENST00000372242 SHMT2P34897 504 aa15.82■□□□□ 0.12
TMEM53-203ENST00000372242 CAPZBP47756 277 aa15.82■□□□□ 0.12
TMEM53-203ENST00000372242 ID4P47928 161 aa15.82■□□□□ 0.12
TMEM53-203ENST00000372242 KCNC1P48547 511 aa15.82■□□□□ 0.12
TMEM53-203ENST00000372242 RAB28P51157 221 aa15.82■□□□□ 0.12
TMEM53-203ENST00000372242 ATP6V0D1P61421 351 aa15.82■□□□□ 0.12
TMEM53-203ENST00000372242 SPIDRQ14159 915 aa15.82■□□□□ 0.12
TMEM53-203ENST00000372242 FAM83EQ2M2I3 478 aa15.82■□□□□ 0.12
TMEM53-203ENST00000372242 CCDC91Q7Z6B0 441 aa15.82■□□□□ 0.12
TMEM53-203ENST00000372242 ISCA2Q86U28 154 aa15.82■□□□□ 0.12
TMEM53-203ENST00000372242 TAX1BP1Q86VP1 789 aa15.82■□□□□ 0.12
TMEM53-203ENST00000372242 ADGRF3Q8IZF5 1079 aa15.82■□□□□ 0.12
TMEM53-203ENST00000372242 NMRAL1Q9HBL8 299 aa15.82■□□□□ 0.12
TMEM53-203ENST00000372242 ARL15Q9NXU5 204 aa15.82■□□□□ 0.12
TMEM53-203ENST00000372242 SPHK1Q9NYA1 384 aa15.82■□□□□ 0.12
TMEM53-203ENST00000372242 LGALS13Q9UHV8 139 aa15.82■□□□□ 0.12
TMEM53-203ENST00000372242 KDM1AO60341 852 aa15.82■□□□□ 0.12
TMEM53-203ENST00000372242 HIST1H2AGP0C0S8 130 aaPredicted RBP15.82■□□□□ 0.12
TMEM53-203ENST00000372242 HIST1H2ADP20671 130 aa15.82■□□□□ 0.12
TMEM53-203ENST00000372242 GFERP55789 205 aa15.82■□□□□ 0.12
TMEM53-203ENST00000372242 FASTKQ14296 549 aaKnown RBP15.82■□□□□ 0.12
TMEM53-203ENST00000372242 IRGCQ6NXR0 463 aa15.82■□□□□ 0.12
TMEM53-203ENST00000372242 ZNF574Q6ZN55 896 aaPredicted RBP15.82■□□□□ 0.12
TMEM53-203ENST00000372242 ADAMTSL2Q86TH1 951 aa15.82■□□□□ 0.12
TMEM53-203ENST00000372242 OOSP2Q86WS3 158 aa15.82■□□□□ 0.12
TMEM53-203ENST00000372242 RIBC1Q8N443 379 aaPredicted RBP15.82■□□□□ 0.12
TMEM53-203ENST00000372242 PPFIBP2Q8ND30 876 aa15.82■□□□□ 0.12
TMEM53-203ENST00000372242 KIAA1191Q96A73 305 aa15.82■□□□□ 0.12
TMEM53-203ENST00000372242 HIST1H2AHQ96KK5 128 aa15.82■□□□□ 0.12
TMEM53-203ENST00000372242 GPR78Q96P69 363 aa15.82■□□□□ 0.12
TMEM53-203ENST00000372242 HIST1H2AJQ99878 128 aa15.82■□□□□ 0.12
TMEM53-203ENST00000372242 H2AFJQ9BTM1 129 aa15.82■□□□□ 0.12
TMEM53-203ENST00000372242 OR6C2Q9NZP2 312 aa15.82■□□□□ 0.12
TMEM53-203ENST00000372242 KLHL3Q9UH77 587 aa15.82■□□□□ 0.12
TMEM53-203ENST00000372242 LNPEPQ9UIQ6 1025 aa15.82■□□□□ 0.12
TMEM53-203ENST00000372242 GSAPA4D1B5 854 aa15.81■□□□□ 0.12
TMEM53-203ENST00000372242 D6RAR5 112 aa15.81■□□□□ 0.12
TMEM53-203ENST00000372242 CAPN5O15484 640 aaPredicted RBP15.81■□□□□ 0.12
TMEM53-203ENST00000372242 CHRM5P08912 532 aaPredicted RBP15.81■□□□□ 0.12
TMEM53-203ENST00000372242 SNAP47Q5SQN1 464 aa15.81■□□□□ 0.12
TMEM53-203ENST00000372242 KLHL35Q6PF15 583 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms