RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 CPSF6Q16630 551 aaKnown RBP eCLIP18.71■□□□□ 0.58
TMEM53-202ENST00000372237 CTU2Q2VPK5 515 aaKnown RBP18.71■□□□□ 0.58
TMEM53-202ENST00000372237 ATG9BQ674R7 924 aa18.71■□□□□ 0.58
TMEM53-202ENST00000372237 RBM23Q86U06 439 aaKnown RBP18.71■□□□□ 0.58
TMEM53-202ENST00000372237 UBTD2Q8WUN7 234 aa18.71■□□□□ 0.58
TMEM53-202ENST00000372237 ZNF296Q8WUU4 475 aaPredicted RBP18.71■□□□□ 0.58
TMEM53-202ENST00000372237 USP7Q93009 1102 aa18.71■□□□□ 0.58
TMEM53-202ENST00000372237 PARVBQ9HBI1 364 aa18.71■□□□□ 0.58
TMEM53-202ENST00000372237 MTRRQ9UBK8 725 aa18.71■□□□□ 0.58
TMEM53-202ENST00000372237 U3KQV3 271 aa18.71■□□□□ 0.58
TMEM53-202ENST00000372237 ZBTB11O95625 1053 aaPredicted RBP18.7■□□□□ 0.58
TMEM53-202ENST00000372237 SELPP16109 830 aa18.7■□□□□ 0.58
TMEM53-202ENST00000372237 AGXTP21549 392 aa18.7■□□□□ 0.58
TMEM53-202ENST00000372237 DCTP40126 519 aa18.7■□□□□ 0.58
TMEM53-202ENST00000372237 GTF2IRD2BQ6EKJ0 949 aa18.7■□□□□ 0.58
TMEM53-202ENST00000372237 TMEM179BQ7Z7N9 219 aa18.7■□□□□ 0.58
TMEM53-202ENST00000372237 GTF2IRD2Q86UP8 949 aa18.7■□□□□ 0.58
TMEM53-202ENST00000372237 NPAS4Q8IUM7 802 aa18.7■□□□□ 0.58
TMEM53-202ENST00000372237 ZCCHC7Q8N3Z6 543 aaKnown RBP18.7■□□□□ 0.58
TMEM53-202ENST00000372237 NETO1Q8TDF5 533 aa18.7■□□□□ 0.58
TMEM53-202ENST00000372237 TMEM175Q9BSA9 504 aa18.7■□□□□ 0.58
TMEM53-202ENST00000372237 HTATIP2Q9BUP3 242 aa18.7■□□□□ 0.58
TMEM53-202ENST00000372237 DGCR6LQ9BY27 220 aa18.7■□□□□ 0.58
TMEM53-202ENST00000372237 MAGIXQ9H6Y5 334 aa18.7■□□□□ 0.58
TMEM53-202ENST00000372237 RDH14Q9HBH5 336 aa18.7■□□□□ 0.58
TMEM53-202ENST00000372237 OR51B4Q9Y5P0 310 aa18.7■□□□□ 0.58
TMEM53-202ENST00000372237 TRBV5-3A0A0A0MS03 114 aa18.69■□□□□ 0.58
TMEM53-202ENST00000372237 TRBV5-4A0A0C4DH59 114 aa18.69■□□□□ 0.58
TMEM53-202ENST00000372237 A8MX80 341 aa18.69■□□□□ 0.58
TMEM53-202ENST00000372237 FAM220BPB1ANY3 271 aa18.69■□□□□ 0.58
TMEM53-202ENST00000372237 AREL1O15033 823 aa18.69■□□□□ 0.58
TMEM53-202ENST00000372237 ERN1O75460 977 aaKnown RBP18.69■□□□□ 0.58
TMEM53-202ENST00000372237 CLDN9O95484 217 aa18.69■□□□□ 0.58
TMEM53-202ENST00000372237 KRT6AP02538 564 aa18.69■□□□□ 0.58
TMEM53-202ENST00000372237 KRT6BP04259 564 aa18.69■□□□□ 0.58
TMEM53-202ENST00000372237 HTR1AP08908 422 aa18.69■□□□□ 0.58
TMEM53-202ENST00000372237 BPIP17213 487 aa18.69■□□□□ 0.58
TMEM53-202ENST00000372237 KRT6CP48668 564 aa18.69■□□□□ 0.58
TMEM53-202ENST00000372237 VEGFBP49765 207 aa18.69■□□□□ 0.58
TMEM53-202ENST00000372237 RPS14P62263 151 aaKnown RBP18.69■□□□□ 0.58
TMEM53-202ENST00000372237 SMAD3P84022 425 aaKnown RBP18.69■□□□□ 0.58
TMEM53-202ENST00000372237 PIGFQ07326 219 aa18.69■□□□□ 0.58
TMEM53-202ENST00000372237 LYPLAL1Q5VWZ2 237 aa18.69■□□□□ 0.58
TMEM53-202ENST00000372237 METTL2BQ6P1Q9 378 aaKnown RBP18.69■□□□□ 0.58
TMEM53-202ENST00000372237 MACC1Q6ZN28 852 aa18.69■□□□□ 0.58
TMEM53-202ENST00000372237 DET1Q7L5Y6 550 aa18.69■□□□□ 0.58
TMEM53-202ENST00000372237 DNAJB8Q8NHS0 232 aa18.69■□□□□ 0.58
TMEM53-202ENST00000372237 WFDC5Q8TCV5 224 aa18.69■□□□□ 0.58
TMEM53-202ENST00000372237 CSF3RQ99062 836 aa18.69■□□□□ 0.58
TMEM53-202ENST00000372237 MRPL9Q9BYD2 267 aaKnown RBP18.69■□□□□ 0.58
TMEM53-202ENST00000372237 CHCHD3Q9NX63 227 aaKnown RBP18.69■□□□□ 0.58
TMEM53-202ENST00000372237 ORC6Q9Y5N6 252 aa18.69■□□□□ 0.58
TMEM53-202ENST00000372237 SNX5Q9Y5X3 404 aa18.69■□□□□ 0.58
TMEM53-202ENST00000372237 CBFA2T3O75081 653 aa18.69■□□□□ 0.58
TMEM53-202ENST00000372237 ANXA5P08758 320 aa18.69■□□□□ 0.58
TMEM53-202ENST00000372237 ZNF12P17014 697 aa18.69■□□□□ 0.58
TMEM53-202ENST00000372237 GKP32189 559 aa18.69■□□□□ 0.58
TMEM53-202ENST00000372237 HNF1BP35680 557 aa18.69■□□□□ 0.58
TMEM53-202ENST00000372237 TOP3AQ13472 1001 aaPredicted RBP18.69■□□□□ 0.58
TMEM53-202ENST00000372237 GPNMBQ14956 572 aa18.69■□□□□ 0.58
TMEM53-202ENST00000372237 CHRNA6Q15825 494 aa18.69■□□□□ 0.58
TMEM53-202ENST00000372237 TTLL9Q3SXZ7 439 aa18.69■□□□□ 0.58
TMEM53-202ENST00000372237 TMEM132CQ8N3T6 1108 aa18.69■□□□□ 0.58
TMEM53-202ENST00000372237 DCAF4L2Q8NA75 395 aa18.69■□□□□ 0.58
TMEM53-202ENST00000372237 HJURPQ8NCD3 748 aaPredicted RBP18.69■□□□□ 0.58
TMEM53-202ENST00000372237 FRS2Q8WU20 508 aa18.69■□□□□ 0.58
TMEM53-202ENST00000372237 ACPTQ9BZG2 426 aa18.69■□□□□ 0.58
TMEM53-202ENST00000372237 KCNH6Q9H252 994 aa18.69■□□□□ 0.58
TMEM53-202ENST00000372237 STOML2Q9UJZ1 356 aa18.69■□□□□ 0.58
TMEM53-202ENST00000372237 BAG5Q9UL15 447 aa18.69■□□□□ 0.58
TMEM53-202ENST00000372237 SMAD6O43541 496 aaKnown RBP18.68■□□□□ 0.58
TMEM53-202ENST00000372237 FKTNO75072 461 aa18.68■□□□□ 0.58
TMEM53-202ENST00000372237 RECQL5O94762 991 aaPredicted RBP18.68■□□□□ 0.58
TMEM53-202ENST00000372237 GSNP06396 782 aa18.68■□□□□ 0.58
TMEM53-202ENST00000372237 S100A3P33764 101 aa18.68■□□□□ 0.58
TMEM53-202ENST00000372237 RAB15P59190 212 aa18.68■□□□□ 0.58
TMEM53-202ENST00000372237 ISL1P61371 349 aa18.68■□□□□ 0.58
TMEM53-202ENST00000372237 PHC1P78364 1004 aa18.68■□□□□ 0.58
TMEM53-202ENST00000372237 ADGRG2Q8IZP9 1017 aa18.68■□□□□ 0.58
TMEM53-202ENST00000372237 C10orf111Q8N326 155 aa18.68■□□□□ 0.58
TMEM53-202ENST00000372237 ARL10Q8N8L6 244 aa18.68■□□□□ 0.58
TMEM53-202ENST00000372237 COX4I2Q96KJ9 171 aa18.68■□□□□ 0.58
TMEM53-202ENST00000372237 SLC29A3Q9BZD2 475 aa18.68■□□□□ 0.58
TMEM53-202ENST00000372237 RAD21L1Q9H4I0 556 aa18.68■□□□□ 0.58
TMEM53-202ENST00000372237 PTGES3LE9PB15 166 aa18.68■□□□□ 0.58
TMEM53-202ENST00000372237 J3QRK9 145 aa18.68■□□□□ 0.58
TMEM53-202ENST00000372237 SLC1A7O00341 560 aa18.68■□□□□ 0.58
TMEM53-202ENST00000372237 CLPXO76031 633 aa18.68■□□□□ 0.58
TMEM53-202ENST00000372237 PDYNP01213 254 aa18.68■□□□□ 0.58
TMEM53-202ENST00000372237 SPAM1P38567 509 aa18.68■□□□□ 0.58
TMEM53-202ENST00000372237 RPIAP49247 311 aa18.68■□□□□ 0.58
TMEM53-202ENST00000372237 RAD23AP54725 363 aa18.68■□□□□ 0.58
TMEM53-202ENST00000372237 KIAA1841Q6NSI8 718 aa18.68■□□□□ 0.58
TMEM53-202ENST00000372237 GALNT18Q6P9A2 607 aa18.68■□□□□ 0.58
TMEM53-202ENST00000372237 ANKRD46Q86W74 232 aa18.68■□□□□ 0.58
TMEM53-202ENST00000372237 SELENOMQ8WWX9 145 aa18.68■□□□□ 0.58
TMEM53-202ENST00000372237 FBXL8Q96CD0 374 aa18.68■□□□□ 0.58
TMEM53-202ENST00000372237 FUNDC2Q9BWH2 189 aa18.68■□□□□ 0.58
TMEM53-202ENST00000372237 RMND5AQ9H871 391 aa18.68■□□□□ 0.58
TMEM53-202ENST00000372237 AFF4Q9UHB7 1163 aaKnown RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms