RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 ZNF300Q96RE9 604 aaPredicted RBP8.68□□□□□ -1.02
ATG4A-203ENST00000372232 DGCR6LQ9BY27 220 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 CCM2LQ9NUG4 571 aaPredicted RBP8.68□□□□□ -1.02
ATG4A-203ENST00000372232 UBQLN1Q9UMX0 589 aaKnown RBP8.68□□□□□ -1.02
ATG4A-203ENST00000372232 ACTL7AQ9Y615 435 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 CDY2AQ9Y6F7 541 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 CDY1Q9Y6F8 540 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 PRR23AA6NEV1 266 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 J3QW42 95 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 PIRO00625 290 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 GATCO43716 136 aaKnown RBP8.68□□□□□ -1.02
ATG4A-203ENST00000372232 SSX4O60224 188 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 GMDSO60547 372 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 MT-CO1P00395 513 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 APOC1P02654 83 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 PCMT1P22061 227 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 DNAJB1P25685 340 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 PSMA4P25789 261 aaKnown RBP8.68□□□□□ -1.02
ATG4A-203ENST00000372232 ARRB2P32121 409 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 CPT1AP50416 773 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 SNX16P57768 344 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 RPL10AP62906 217 aaKnown RBP8.68□□□□□ -1.02
ATG4A-203ENST00000372232 FLI1Q01543 452 aaPredicted RBP8.68□□□□□ -1.02
ATG4A-203ENST00000372232 SIM2Q14190 667 aaPredicted RBP8.68□□□□□ -1.02
ATG4A-203ENST00000372232 PLCL1Q15111 1095 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 TIGD3Q6B0B8 471 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 SCYL2Q6P3W7 929 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 NLRC3Q7RTR2 1065 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 ZDHHC17Q8IUH5 632 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 PHC2Q8IXK0 858 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 PDIK1LQ8N165 341 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 PQLC3Q8N755 202 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 C7orf31Q8N865 590 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 SMG8Q8ND04 991 aaKnown RBP8.68□□□□□ -1.02
ATG4A-203ENST00000372232 STON2Q8WXE9 905 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 YIPF5Q969M3 257 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 YIPF6Q96EC8 236 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 SLC45A3Q96JT2 553 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 UBXN10Q96LJ8 280 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 MAGEB10Q96LZ2 347 aaPredicted RBP8.68□□□□□ -1.02
ATG4A-203ENST00000372232 CDADC1Q9BWV3 514 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 APOL5Q9BWW9 433 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 B3GNT5Q9BYG0 378 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 ITM2CQ9NQX7 267 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 ADA2Q9NZK5 511 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 OPTCQ9UBM4 332 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 ANAPC2Q9UJX6 822 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 SARDHQ9UL12 918 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 COPS3Q9UNS2 423 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 A3GALT2U3KPV4 340 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 SMIM28A0A1B0GU29 152 aa8.67□□□□□ -1.02
ATG4A-203ENST00000372232 HEATR9A2RTY3 570 aa8.67□□□□□ -1.02
ATG4A-203ENST00000372232 BLACEA4D250 179 aa8.67□□□□□ -1.02
ATG4A-203ENST00000372232 SH3D21A4FU49 640 aa8.67□□□□□ -1.02
ATG4A-203ENST00000372232 ZNF99A8MXY4 864 aaPredicted RBP8.67□□□□□ -1.02
ATG4A-203ENST00000372232 LINC00587B1AMM8 73 aa8.67□□□□□ -1.02
ATG4A-203ENST00000372232 KBTBD13C9JR72 458 aa8.67□□□□□ -1.02
ATG4A-203ENST00000372232 NRP1O14786 923 aa8.67□□□□□ -1.02
ATG4A-203ENST00000372232 HCRTO43612 131 aa8.67□□□□□ -1.02
ATG4A-203ENST00000372232 SLC22A5O76082 557 aa8.67□□□□□ -1.02
ATG4A-203ENST00000372232 MYL3P08590 195 aa8.67□□□□□ -1.02
ATG4A-203ENST00000372232 TNNI3P19429 210 aa8.67□□□□□ -1.02
ATG4A-203ENST00000372232 ACVR2AP27037 513 aa8.67□□□□□ -1.02
ATG4A-203ENST00000372232 PSME3P61289 254 aa8.67□□□□□ -1.02
ATG4A-203ENST00000372232 MLLT1Q03111 559 aaPredicted RBP8.67□□□□□ -1.02
ATG4A-203ENST00000372232 HYAL2Q12891 473 aa8.67□□□□□ -1.02
ATG4A-203ENST00000372232 DHCR24Q15392 516 aa8.67□□□□□ -1.02
ATG4A-203ENST00000372232 AANATQ16613 207 aa8.67□□□□□ -1.02
ATG4A-203ENST00000372232 ANKRD39Q53RE8 183 aa8.67□□□□□ -1.02
ATG4A-203ENST00000372232 FBXO47Q5MNV8 452 aa8.67□□□□□ -1.02
ATG4A-203ENST00000372232 CFAP77Q6ZQR2 320 aa8.67□□□□□ -1.02
ATG4A-203ENST00000372232 HFE2Q6ZVN8 426 aa8.67□□□□□ -1.02
ATG4A-203ENST00000372232 HTR3DQ70Z44 454 aa8.67□□□□□ -1.02
ATG4A-203ENST00000372232 R3HCC1LQ7Z5L2 792 aaKnown RBP8.67□□□□□ -1.02
ATG4A-203ENST00000372232 IGDCC3Q8IVU1 814 aa8.67□□□□□ -1.02
ATG4A-203ENST00000372232 CRYBG2Q8N1P7 616 aa8.67□□□□□ -1.02
ATG4A-203ENST00000372232 CBARPQ8N350 705 aaPredicted RBP8.67□□□□□ -1.02
ATG4A-203ENST00000372232 ZNF781Q8N8C0 355 aa8.67□□□□□ -1.02
ATG4A-203ENST00000372232 ANKRD52Q8NB46 1076 aa8.67□□□□□ -1.02
ATG4A-203ENST00000372232 ZNF680Q8NEM1 530 aa8.67□□□□□ -1.02
ATG4A-203ENST00000372232 PCDH19Q8TAB3 1148 aa8.67□□□□□ -1.02
ATG4A-203ENST00000372232 CANT1Q8WVQ1 401 aa8.67□□□□□ -1.02
ATG4A-203ENST00000372232 DNAJB3Q8WWF6 145 aa8.67□□□□□ -1.02
ATG4A-203ENST00000372232 ST8SIA4Q92187 359 aa8.67□□□□□ -1.02
ATG4A-203ENST00000372232 AKAP1Q92667 903 aaKnown RBP eCLIP8.67□□□□□ -1.02
ATG4A-203ENST00000372232 CENPNQ96H22 339 aaPredicted RBP8.67□□□□□ -1.02
ATG4A-203ENST00000372232 SCLYQ96I15 445 aa8.67□□□□□ -1.02
ATG4A-203ENST00000372232 FOPNLQ96NB1 174 aa8.67□□□□□ -1.02
ATG4A-203ENST00000372232 AARSD1Q9BTE6 412 aaKnown RBP8.67□□□□□ -1.02
ATG4A-203ENST00000372232 UPF3AQ9H1J1 476 aaKnown RBP8.67□□□□□ -1.02
ATG4A-203ENST00000372232 GPATCH2LQ9NWQ4 482 aa8.67□□□□□ -1.02
ATG4A-203ENST00000372232 FLRT1Q9NZU1 646 aa8.67□□□□□ -1.02
ATG4A-203ENST00000372232 MAGED2Q9UNF1 606 aaPredicted RBP8.67□□□□□ -1.02
ATG4A-203ENST00000372232 PIN4Q9Y237 131 aaKnown RBP8.67□□□□□ -1.02
ATG4A-203ENST00000372232 CITO14578 2027 aa8.67□□□□□ -1.02
ATG4A-203ENST00000372232 SCN1AP35498 2009 aa8.67□□□□□ -1.02
ATG4A-203ENST00000372232 MEIOCA2RUB1 952 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 TCAF2A6NFQ2 919 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 SLC22A31A6NKX4 558 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 KPNA7A9QM74 516 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms